| [14de469] | 1 | #                                               -*- Autoconf -*- | 
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|  | 2 | # Process this file with autoconf to produce a configure script. | 
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|  | 3 |  | 
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|  | 4 | AC_PREREQ(2.59) | 
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| [bff5e2] | 5 | AC_INIT(MoleCuilder, 1.5.0, [heber@ins.uni-bonn.de], [molecuilder], [http://trac.ins.uni-bonn.de/projects/molecuilder/]) | 
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| [bf4b9f] | 6 | AC_CONFIG_AUX_DIR([build-aux]) | 
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| [14de469] | 7 | AC_CONFIG_SRCDIR([src/builder.cpp]) | 
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| [861874] | 8 | AC_CONFIG_HEADER([config.h libmolecuilder_config.h]) | 
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|  | 9 | AC_CONFIG_MACRO_DIR([m4]) | 
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| [bf4b9f] | 10 | AC_CONFIG_SUBDIRS([LinearAlgebra]) | 
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| [14de469] | 11 |  | 
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| [dc322a] | 12 | # parallel-tests: use parallel test druver | 
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|  | 13 | # color-tests: us coloring to indicate success/failure when available | 
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|  | 14 | # tar-pax: use newer tar implementation with longer filename (>99 chars) | 
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| [3b35e7] | 15 | AM_INIT_AUTOMAKE([dist-bzip2 1.5 parallel-tests color-tests tar-pax subdir-objects]) | 
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| [14de469] | 16 |  | 
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|  | 17 | # Checks for programs. | 
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|  | 18 | AC_PROG_CXX | 
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| [54a746] | 19 | AC_PROG_INSTALL | 
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| [14de469] | 20 |  | 
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| [0cfc27] | 21 | # check for cppunit (taken from svn.apache.org/../xmlbeanscxx) | 
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|  | 22 | AM_PATH_CPPUNIT(1.9.6) | 
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|  | 23 | AM_CONDITIONAL(CONDCPPUNIT, test "$CPPUNIT_LIBS") | 
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|  | 24 |  | 
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| [c015b3] | 25 | dnl Check if we have enable python | 
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|  | 26 | # python module | 
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|  | 27 | AC_MSG_CHECKING(whether to enable python module) | 
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| [f99714] | 28 | AC_ARG_ENABLE( | 
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|  | 29 | [python], | 
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|  | 30 | AS_HELP_STRING([--enable-python],[turn on python module [default=yes]]), | 
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|  | 31 | enable_python=$enableval, | 
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|  | 32 | enable_python="yes") | 
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| [c015b3] | 33 | AC_MSG_RESULT($enable_python) | 
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|  | 34 | AS_IF([test x"$enable_python" != x"no"],[ | 
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|  | 35 | # Python (for boost::python) | 
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|  | 36 | AM_PATH_PYTHON([2.2]) | 
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|  | 37 | AX_PYTHON | 
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|  | 38 | AC_DEFINE(HAVE_PYTHON,1, ["Build python module and scripts."]) | 
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|  | 39 | ]) | 
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|  | 40 | AM_CONDITIONAL([CONDPYTHON], [test x"$enable_python" != x"no"]) | 
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|  | 41 | AC_SUBST(HAVE_PYTHON) | 
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|  | 42 |  | 
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| [74459a] | 43 | dnl Check whether no extra thread for ActionQueue shall be used | 
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|  | 44 | AC_MSG_CHECKING(whether to enable ActionQueue's run thread) | 
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|  | 45 | AC_ARG_ENABLE( | 
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|  | 46 | [action_thread], | 
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|  | 47 | AS_HELP_STRING([--enable-action-thread],[turn on extra run thread for ActionQueue [default=yes]]), | 
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|  | 48 | enable_action_thread=$enableval, | 
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|  | 49 | enable_action_thread="no" | 
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|  | 50 | ) | 
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|  | 51 | AC_MSG_RESULT($enable_action_thread) | 
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|  | 52 | AS_IF([test x"$enable_action_thread" != x"no"],[ | 
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|  | 53 | AC_DEFINE(HAVE_ACTION_THREAD,1, ["Have extra run thread for ActionQueue."]) | 
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|  | 54 | ]) | 
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|  | 55 | AM_CONDITIONAL([CONDACTIONTHREAD], [test x"$enable_action_thread" != x"no"]) | 
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|  | 56 | AC_SUBST(HAVE_ACTION_THREAD) | 
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|  | 57 |  | 
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| [c015b3] | 58 | dnl Check if we have enable qtgui | 
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| [e5cec4] | 59 | # Qt programs | 
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| [c015b3] | 60 | AC_MSG_CHECKING(whether to enable Qt-based GUI) | 
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| [f99714] | 61 | AC_ARG_ENABLE( | 
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|  | 62 | [qtgui], | 
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|  | 63 | AS_HELP_STRING([--enable-qtgui],[turn on Qt GUI compilation [default=yes]]), | 
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|  | 64 | enable_qtgui=$enableval, | 
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|  | 65 | enable_qtgui="yes") | 
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| [c015b3] | 66 | AC_MSG_RESULT($enable_qtgui) | 
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|  | 67 | AS_IF([test x"$enable_qtgui" != x"no"],[ | 
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| [93909a] | 68 | AC_ARG_WITH( | 
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|  | 69 | [Qt-bin], | 
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|  | 70 | [AS_HELP_STRING([--with-Qt-bin], [give path to Qt binaries])], | 
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|  | 71 | [have_qtgui_path=$withval], | 
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|  | 72 | have_qtgui_path="") | 
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| [196702] | 73 | AS_IF([test x"$have_qtgui_path" != x""],[ | 
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|  | 74 | AC_PATH_PROGS([QT_MOC], | 
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|  | 75 | [moc-qt4 moc], | 
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|  | 76 | [AC_MSG_ERROR(["Qts moc not found, please use --with-Qt-bin."])], | 
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|  | 77 | [$have_qtgui_path] | 
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|  | 78 | ) | 
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|  | 79 | AC_PATH_PROGS([QT_RCC], | 
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|  | 80 | [rcc-qt4 rcc], | 
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|  | 81 | [AC_MSG_ERROR(["Qts rcc not found, please use --with-Qt-bin."])], | 
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|  | 82 | [$have_qtgui_path] | 
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|  | 83 | ) | 
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|  | 84 | AC_PATH_PROGS([QT_UIC], | 
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|  | 85 | [uic-qt4 uic], | 
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|  | 86 | [AC_MSG_ERROR(["Qts uic not found, please use --with-Qt-bin."])], | 
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|  | 87 | [$have_qtgui_path] | 
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|  | 88 | ) | 
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|  | 89 | ],[ | 
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|  | 90 | AC_PATH_PROGS([QT_MOC], | 
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|  | 91 | [moc-qt4 moc], | 
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|  | 92 | [AC_MSG_ERROR(["Qts moc not found, please use --with-Qt-bin."])] | 
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|  | 93 | ) | 
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|  | 94 | AC_PATH_PROGS([QT_RCC], | 
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|  | 95 | [rcc-qt4 rcc], | 
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|  | 96 | [AC_MSG_ERROR(["Qts rcc not found, please use --with-Qt-bin."])] | 
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|  | 97 | ) | 
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|  | 98 | AC_PATH_PROGS([QT_UIC], | 
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|  | 99 | [uic-qt4 uic], | 
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|  | 100 | [AC_MSG_ERROR(["Qts uic not found, please use --with-Qt-bin."])] | 
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|  | 101 | ) | 
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|  | 102 | ]) | 
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| [c015b3] | 103 | PKG_CHECK_MODULES([QT], [QtCore QtGui Qt3D], [ | 
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|  | 104 | ]) | 
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|  | 105 | AC_SUBST([QT_CFLAGS]) | 
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|  | 106 | AC_SUBST([QT_LIBS]) | 
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|  | 107 | AC_DEFINE(HAVE_QTGUI,1, ["Build Qt-based GUI"]) | 
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| [e5cec4] | 108 | ]) | 
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| [c015b3] | 109 | AM_CONDITIONAL([CONDQTGUI], [test x"$enable_qtgui" != x"no"]) | 
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|  | 110 | AC_SUBST(HAVE_QTGUI) | 
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| [e5cec4] | 111 |  | 
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| [c76b8b] | 112 | # check additionally for QWT to enable plotting of potentials | 
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|  | 113 | AC_MSG_CHECKING(whether to enable Qwt-based plotting) | 
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|  | 114 | #enable_qwt=yes | 
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|  | 115 | AC_ARG_ENABLE( | 
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|  | 116 | [qwt], | 
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|  | 117 | AS_HELP_STRING([--enable-qwt],[turn on Qwt compilation [default=yes]]), | 
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|  | 118 | enable_qwt=$enableval, | 
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|  | 119 | enable_qwt="yes") | 
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|  | 120 | AC_MSG_RESULT($enable_qwt) | 
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|  | 121 | AS_IF([test x"$enable_qwt" != x"no"],[ | 
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|  | 122 | MOL_AC_HAVE_QWT_IFELSE( | 
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|  | 123 | [ | 
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|  | 124 | enable_qwt=yes | 
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|  | 125 | AC_DEFINE(HAVE_QWT,1, ["Build Qwt-based plotting"]) | 
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|  | 126 | ], | 
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|  | 127 | [ | 
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|  | 128 | enable_qwt=no | 
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|  | 129 | AC_MSG_WARN([Qwt not found, disabling plotting in QtUI.]) | 
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|  | 130 | ] | 
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|  | 131 | ) | 
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|  | 132 | ]) | 
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|  | 133 | AM_CONDITIONAL([CONDQWT], [test x"$enable_qwt" != x"no"]) | 
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|  | 134 | AC_SUBST(HAVE_QWT) | 
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|  | 135 |  | 
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| [ec188c] | 136 | # use doxygen | 
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|  | 137 | DX_HTML_FEATURE(ON) | 
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|  | 138 | DX_PS_FEATURE(OFF) | 
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|  | 139 | DX_PDF_FEATURE(OFF) | 
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| [3158e6] | 140 | DX_INIT_DOXYGEN(MoleCuilder, Doxyfile, ${docdir}) | 
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| [ec188c] | 141 |  | 
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| [6029a6] | 142 | # use docbook | 
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|  | 143 | AX_CHECK_DOCBOOK | 
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|  | 144 |  | 
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| [ec188c] | 145 | # use libtool | 
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| [a0064e] | 146 | LT_INIT([static]) | 
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| [861874] | 147 |  | 
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|  | 148 | # Define these substitions here to keep all version information in one place. | 
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|  | 149 | # For information on how to properly maintain the library version information, | 
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|  | 150 | # refer to the libtool manual, section "Updating library version information": | 
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|  | 151 | # http://www.gnu.org/software/libtool/manual/html_node/Updating-version-info.html | 
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| [bff5e2] | 152 | AC_SUBST([MOLECUILDER_SO_VERSION], [15:0:0]) | 
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|  | 153 | AC_SUBST([MOLECUILDER_API_VERSION], [1.5.0]) | 
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| [06aedc] | 154 |  | 
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| [dc031c] | 155 | dnl this macro is used to get the arguments supplied | 
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|  | 156 | dnl to the configure script (./configure --enable-debug) | 
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|  | 157 | dnl Check if we have enable debug support. | 
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|  | 158 | AC_MSG_CHECKING(whether to enable debugging) | 
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|  | 159 | have_debug="no" | 
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| [f99714] | 160 | AC_ARG_ENABLE( | 
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|  | 161 | [debug], | 
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|  | 162 | AS_HELP_STRING([--enable-debug],[turn on debugging [default=no]]), | 
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|  | 163 | enable_debug=$enableval, | 
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|  | 164 | enable_debug="no") | 
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|  | 165 | AC_MSG_RESULT($enable_debug) | 
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|  | 166 | AS_IF([test x"$enable_debug" = x"yes"],[ | 
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| [dc031c] | 167 | AC_DEFINE(MEMDEBUG,1, ["Use memory debugger."]) | 
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|  | 168 | AC_DEFINE(HAVE_DEBUG,1, ["Use debug setting to compile code."]) | 
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|  | 169 | have_debug="yes" | 
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| [f99714] | 170 | ],[ | 
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|  | 171 | AS_IF([test x"$enable_debug" = x"full"],[ | 
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|  | 172 | AC_DEFINE(MEMDEBUG,1, ["Use memory debugger."]) | 
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|  | 173 | AC_DEFINE(LOG_OBSERVER,1, ["Use observer log."]) | 
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|  | 174 | AC_DEFINE(HAVE_DEBUG,2, ["Use debug setting to compile code."]) | 
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| [4d6d6a] | 175 | dnl AC_DEFINE(QT_DEBUG,, ["Enable Qt debug messages."]) | 
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| [f99714] | 176 | have_debug="full" | 
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|  | 177 | ],[ | 
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|  | 178 | AC_DEFINE(NDEBUG,1, ["Don't compile in debugging code."]) | 
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|  | 179 | AC_DEFINE(HAVE_DEBUG,0, ["Use debug setting to compile code."]) | 
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| [4d6d6a] | 180 | AC_DEFINE(QT_NO_DEBUG_OUTPUT,, ["Disable Qt debug messages."]) | 
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| [f99714] | 181 | have_debug="no" | 
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|  | 182 | ]) | 
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|  | 183 | ]) | 
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| [dc031c] | 184 | AC_SUBST(HAVE_DEBUG) | 
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|  | 185 |  | 
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|  | 186 | dnl this macro is used to get the arguments supplied | 
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|  | 187 | dnl to the configure script (./configure --enable-debug) | 
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|  | 188 | dnl Check if we have enable debug support. | 
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| [f3b8a5] | 189 | AC_MSG_CHECKING(whether to enable internal caching/lazy evaluation) | 
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| [f99714] | 190 | AC_ARG_ENABLE( | 
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|  | 191 | [cache], | 
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|  | 192 | AS_HELP_STRING([--enable-cache],[turn on internal lazy evaluation [default=yes]]), | 
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|  | 193 | enable_cache=$enableval, | 
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|  | 194 | enable_cache="yes") | 
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| [f3b8a5] | 195 | AC_MSG_RESULT($enable_cache) | 
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| [f99714] | 196 | AS_IF([test x"$enable_cache" != x"no"],[ | 
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|  | 197 | AC_DEFINE(HAVE_CACHE,1, ["cache variables to speed up the code."]) | 
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|  | 198 | ],[ | 
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| [dc031c] | 199 | AC_DEFINE(NO_CACHING,1, ["Don't use caching code."]) | 
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|  | 200 | AC_DEFINE(HAVE_CACHE,0, ["cache variables to speed up the code."]) | 
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| [f99714] | 201 | ]) | 
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| [dc031c] | 202 | AC_SUBST(HAVE_CACHE) | 
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|  | 203 |  | 
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| [14de469] | 204 | # Checks for libraries. | 
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| [861874] | 205 | AC_CHECK_LIB(m, sqrt, , AC_MSG_ERROR([compatible libc math library not found])) | 
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| [14de469] | 206 |  | 
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| [7d0a4e] | 207 | # Pthreads | 
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|  | 208 | ACX_PTHREAD() | 
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|  | 209 |  | 
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| [f08ae7] | 210 | # Boost | 
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| [79de12] | 211 | BOOST_REQUIRE([1.40]) | 
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| [f08ae7] | 212 |  | 
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|  | 213 | # Boost headers only | 
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|  | 214 | BOOST_ANY | 
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| [794bc8] | 215 | BOOST_ARRAY | 
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| [4f04ab8] | 216 | BOOST_BIMAP | 
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| [f08ae7] | 217 | BOOST_BIND | 
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| [503acc1] | 218 | BOOST_CAST | 
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| [f08ae7] | 219 | BOOST_CONVERSION | 
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| [79de12] | 220 | BOOST_EXCEPTION | 
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| [f08ae7] | 221 | BOOST_FOREACH | 
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|  | 222 | BOOST_FUNCTION | 
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| [619a0e] | 223 | BOOST_FUSION | 
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| [4f04ab8] | 224 | BOOST_GRAPH | 
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| [30c753] | 225 | BOOST_ITERATOR | 
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| [794bc8] | 226 | BOOST_MULTIARRAY | 
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| [4da4de] | 227 | BOOST_MULTIINDEXCONTAINER | 
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| [619a0e] | 228 | BOOST_MPL | 
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| [f08ae7] | 229 | BOOST_PREPROCESSOR | 
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|  | 230 | BOOST_RANDOM | 
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|  | 231 | BOOST_SMART_PTR | 
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| [7f570c] | 232 | BOOST_STRING_ALGO | 
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| [f08ae7] | 233 | BOOST_TOKENIZER | 
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|  | 234 |  | 
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|  | 235 | # Boost headers with libraries | 
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| [79de12] | 236 | BOOST_FILESYSTEM | 
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| [d920b9] | 237 | BOOST_IOSTREAMS | 
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| [79de12] | 238 | BOOST_PROGRAM_OPTIONS | 
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| [c015b3] | 239 | AS_IF([test x"$enable_python" != x"no"], [BOOST_PYTHON]) | 
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| [d7d022] | 240 | BOOST_SERIALIZATION | 
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| [79de12] | 241 | BOOST_THREADS | 
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| [fa861b] | 242 |  | 
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| [f08ae7] | 243 |  | 
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| [574d377] | 244 | # CodePatterns library (requiring ObservedValue.hpp) | 
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|  | 245 | AM_PATH_CODEPATTERNS([1.3.0], $have_debug,,[AC_MSG_ERROR([Missing CodePatterns library, please specify PKG_CONFIG_PATH or use --with-codepatterns...])]) | 
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| [3027f8] | 246 |  | 
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| [004d5c] | 247 | # JobMarket library (needs boost/archive/iserializer.hpp before MemDebug.hpp) | 
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| [830adf] | 248 | AC_MSG_CHECKING(whether to enable jobmarket) | 
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| [004d5c] | 249 | AC_ARG_ENABLE( | 
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|  | 250 | [jobmarket], | 
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|  | 251 | AS_HELP_STRING([--enable-jobmarket],[turn on JobMarket feature [default=yes]]), | 
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|  | 252 | enable_jobmarket=$enableval, | 
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|  | 253 | enable_jobmarket="yes") | 
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|  | 254 | AC_MSG_RESULT($enable_jobmarket) | 
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|  | 255 | AS_IF([test x"$enable_jobmarket" != x"no"],[ | 
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| [d6a7b9] | 256 | # JobMarket library (needs SystemCommandJob with suffix) | 
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|  | 257 | AM_PATH_JOBMARKET([1.1.5], $have_debug,[ | 
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| [004d5c] | 258 | # the following is only required if we have JobMarket | 
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|  | 259 | BOOST_ASIO | 
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|  | 260 | AC_DEFINE(HAVE_JOBMARKET,1, ["use JobMarket to calculate fragment jobs."]) | 
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|  | 261 | ],[ | 
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|  | 262 | enable_jobmarket="no" | 
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|  | 263 | ]) | 
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|  | 264 | ] | 
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|  | 265 | #[ | 
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|  | 266 | #  AC_DEFINE(HAVE_JOBMARKET,0, ["use JobMarket to calculate fragment jobs."]) | 
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|  | 267 | #] | 
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|  | 268 | ) | 
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|  | 269 | AC_SUBST(HAVE_JOBMARKET) | 
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|  | 270 | AM_CONDITIONAL([CONDJOBMARKET], [test x"$enable_jobmarket" = x"yes"]) | 
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| [3027f8] | 271 |  | 
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| [d2a0f6d] | 272 | # VMG library | 
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|  | 273 | AC_MSG_CHECKING(whether to compile in long-range support via VMG) | 
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|  | 274 | AC_ARG_ENABLE( | 
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|  | 275 | [vmg], | 
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|  | 276 | [AS_HELP_STRING([--enable-vmg], [turn on long-range potential calculation via VMG [default=no]])], | 
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|  | 277 | [enable_vmg=$enableval], | 
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|  | 278 | enable_vmg="no") | 
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|  | 279 | AC_MSG_RESULT($enable_vmg) | 
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|  | 280 | AS_IF([test x"$enable_vmg" != x"no"],[ | 
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|  | 281 | PKG_CHECK_MODULES(VMG, VMG >= 0.1) | 
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|  | 282 | AC_SUBST(VMG_CFLAGS) | 
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|  | 283 | AC_SUBST(VMG_LIBS) | 
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| [69c733] | 284 | AC_DEFINE(HAVE_VMG,1, ["use VMG to calculate long-range contributions."]) | 
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| [8a8c8c] | 285 |  | 
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|  | 286 | # check whether to use mpi | 
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|  | 287 | AC_ARG_WITH( | 
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|  | 288 | [vmg-mpi], | 
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|  | 289 | [AS_HELP_STRING([--with-vmg-mpi], [whether to use MPI for communication in VMGJobs])], | 
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|  | 290 | [with_vmg_mpi=yes], | 
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|  | 291 | [with_vmg_mpi=no]) | 
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|  | 292 | AS_IF( | 
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|  | 293 | [test "x$with_vmg_mpi" != xno], | 
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|  | 294 | [ | 
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|  | 295 | AC_LANG_SAVE | 
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|  | 296 | AC_LANG_CPLUSPLUS | 
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|  | 297 | LX_FIND_MPI | 
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|  | 298 | AC_LANG_RESTORE | 
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|  | 299 | AS_IF([test "x$have_CXX_mpi" = xyes],[ | 
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|  | 300 | AC_DEFINE([MPICH_SKIP_MPICXX], [1], [Skip C++ bindings]) | 
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|  | 301 | AC_DEFINE([OMPI_SKIP_MPICXX], [1], [Skip C++ bindings]) | 
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|  | 302 | AC_DEFINE([MPI_NO_CPPBIND], [1], [Skip C++ bindings]) | 
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|  | 303 | AC_DEFINE([_MPICC_H], [1], [Skip C++ bindings]) | 
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|  | 304 | AC_DEFINE([MPIBULL_SKIP_MPICXX], [1], [Skip C++ bindings]) | 
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|  | 305 | ]) | 
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|  | 306 | ], | 
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|  | 307 | []) | 
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| [d2a0f6d] | 308 | ]) | 
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|  | 309 | AM_CONDITIONAL([CONDVMG], [test x"$enable_vmg" = x"yes"]) | 
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| [8a8c8c] | 310 | AM_CONDITIONAL([CONDVMGMPI], [test x"$have_CXX_mpi" = x"yes"]) | 
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| [d2a0f6d] | 311 |  | 
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|  | 312 |  | 
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| [f06d52] | 313 | # Check for Levenberg-Marquardt implementation | 
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| [830adf] | 314 | AC_MSG_CHECKING(whether to enable function fitting via levmar) | 
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| [48d20d] | 315 | AC_ARG_ENABLE( | 
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|  | 316 | [levmar], | 
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|  | 317 | AS_HELP_STRING([--enable-levmar],[turn on LevMar feature [default=no]]), | 
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|  | 318 | enable_levmar=$enableval, | 
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|  | 319 | enable_levmar="no") | 
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| [4d5dfa] | 320 | AC_MSG_RESULT($enable_levmar) | 
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|  | 321 | # don't use AS_IF here as it expands (and tests) AC_F77_FUN evene if levmar | 
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|  | 322 | # is disabled. | 
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|  | 323 | if test x"$enable_levmar" = x"yes"; then | 
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|  | 324 | AX_LAPACK([enable_levmar=yes],[enable_levmar=no]) | 
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|  | 325 | fi | 
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| [f06d52] | 326 | AS_IF([test x"$enable_levmar" = x"yes"],[ | 
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|  | 327 | AC_ARG_WITH( | 
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|  | 328 | [levmar], | 
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|  | 329 | [AS_HELP_STRING([--with-levmar], [give path to LevMar package])], | 
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|  | 330 | [have_levmar_path=$withval], | 
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|  | 331 | [enable_levmar=no]) | 
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|  | 332 | ],[enable_levmar=no]) | 
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|  | 333 | AS_IF([test x"$enable_levmar" = x"yes"],[ | 
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|  | 334 | LEVMAR_CPPFLAGS="-I${have_levmar_path}/include" | 
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|  | 335 | LEVMAR_LDFLAGS="-L${have_levmar_path}/lib" | 
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|  | 336 | LEVMAR_LIBS="-llevmar" | 
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|  | 337 | AC_SUBST(LEVMAR_CPPFLAGS) | 
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|  | 338 | AC_SUBST(LEVMAR_LDFLAGS) | 
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|  | 339 | AC_SUBST(LEVMAR_LIBS) | 
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| [24ac59] | 340 | AC_DEFINE(HAVE_LEVMAR,1, ["use levmar for non-linear minimisation/potential fitting."]) | 
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| [830adf] | 341 | ],[AC_MSG_WARN(["Missing LAPACK, disabling off levmar"])]) | 
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| [f06d52] | 342 | AM_CONDITIONAL([CONDLEVMAR], [test x"$enable_levmar" = x"yes"]) | 
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|  | 343 |  | 
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| [14de469] | 344 | # Checks for header files. | 
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|  | 345 | AC_HEADER_STDC | 
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|  | 346 | AC_CHECK_HEADERS([sys/time.h]) | 
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|  | 347 | AC_HEADER_STDBOOL | 
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|  | 348 |  | 
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| [d3a46d] | 349 | AC_FUNC_MALLOC | 
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|  | 350 | AC_FUNC_REALLOC | 
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|  | 351 | AC_CHECK_FUNCS([floor pow sqrt strchr]) | 
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|  | 352 |  | 
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| [14de469] | 353 | # Checks for typedefs, structures, and compiler characteristics. | 
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|  | 354 | AC_C_CONST | 
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|  | 355 | AC_C_INLINE | 
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|  | 356 | AC_C_RESTRICT | 
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|  | 357 | AC_TYPE_SIZE_T | 
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|  | 358 |  | 
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|  | 359 | # Checks for library functions. | 
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|  | 360 | # check for GNU Scientific Library | 
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| [bd3e55] | 361 | AC_CHECK_HEADERS([gsl/gsl_blas.h]) | 
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| [db1a72] | 362 | AC_SEARCH_LIBS(dnrm2, gslblas gslcblas goto blas cblas) | 
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|  | 363 | AC_SEARCH_LIBS(cblas_dnrm2, gslblas gslcblas blas cblas) | 
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|  | 364 | AC_SEARCH_LIBS(gsl_blas_dnrm2,, gsl) | 
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|  | 365 | #AC_CHECK_LIB(gsl, gsl_blas_dnrm2, , [AC_MSG_ERROR(["No working BLAS found for GSL, stopping."])]) | 
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|  | 366 | AC_CHECK_LIB(gsl, main) | 
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| [14de469] | 367 |  | 
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| [490038] | 368 | # use CppUnit TestRunner or not | 
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| [f99714] | 369 | AC_MSG_CHECKING(whether to enable ECut TestRunnerClient) | 
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|  | 370 | AC_ARG_ENABLE( | 
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|  | 371 | [ecut], | 
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|  | 372 | AS_HELP_STRING([--enable-ecut],[Use ECut TestRunnerClient [default=no]]), | 
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|  | 373 | enable_ecut=$disableval, | 
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|  | 374 | enable_ecut="no") | 
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|  | 375 | AC_MSG_RESULT($enable_ecut) | 
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|  | 376 | AS_IF([test x"$enable_ecut" = x"yes"],[ | 
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| [9b6b2f] | 377 | AC_DEFINE(HAVE_ECUT,1, ["Use ECut TestRunnerClient instead of our own."]) | 
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|  | 378 | AC_SUBST(HAVE_ECUT) | 
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| [f99714] | 379 | ]) | 
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| [fbbcde] | 380 | AM_CONDITIONAL([CONDECUT], [test x"$enable_ecut" = x"yes"]) | 
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| [9b6b2f] | 381 |  | 
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| [490038] | 382 | # with valgrinding testsuite or not | 
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| [f3b8a5] | 383 | AC_MSG_CHECKING(whether to enable valgrind memory checking in testsuite) | 
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| [f99714] | 384 | AC_ARG_ENABLE( | 
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|  | 385 | [valgrind], | 
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|  | 386 | AS_HELP_STRING([--enable-valgrind],[Use Valgrind on the testsuite [default=no]]), | 
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|  | 387 | enable_valgrind=$enableval, | 
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|  | 388 | enable_valgrind="no") | 
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|  | 389 | AC_MSG_RESULT($enable_valgrind) | 
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|  | 390 | AS_IF([test x"$enable_valgrind" = x"yes"], [ | 
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| [490038] | 391 | AC_CHECK_HEADER([valgrind/valgrind.h], | 
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|  | 392 | [ | 
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|  | 393 | # check header | 
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|  | 394 | AC_DEFINE(HAVE_VALGRIND_TESTSUITE,1, ["Use Valgrind to check the testsuite."]) | 
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|  | 395 | # check path | 
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|  | 396 | AC_PATH_PROG(VALGRIND, [valgrind], [/bin/false]) | 
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|  | 397 | # set variables | 
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|  | 398 | AC_SUBST(HAVE_VALGRIND_TESTSUITE) | 
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|  | 399 | AC_SUBST(VALGRIND) | 
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|  | 400 | ], | 
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|  | 401 | [ | 
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|  | 402 | AC_MSG_ERROR(["Valgrind support requested but headers not available."]) | 
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|  | 403 | ] | 
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|  | 404 | ) | 
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| [f3b8a5] | 405 | ]) | 
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| [490038] | 406 |  | 
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| [14de469] | 407 | # Check for "extern inline", using a modified version | 
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|  | 408 | # of the test for AC_C_INLINE from acspecific.mt | 
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|  | 409 | AC_CACHE_CHECK([for extern inline], ac_cv_c_extern_inline, | 
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|  | 410 | [ac_cv_c_extern_inline=no | 
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|  | 411 | AC_TRY_COMPILE([extern $ac_cv_c_inline double foo(double x); | 
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|  | 412 | extern $ac_cv_c_inline double foo(double x) { return x+1.0; }; | 
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|  | 413 | double foo (double x) { return x + 1.0; };], | 
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|  | 414 | [  foo(1.0)  ], | 
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|  | 415 | [ac_cv_c_extern_inline="yes"]) | 
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|  | 416 | ]) | 
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|  | 417 |  | 
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|  | 418 | if test "$ac_cv_c_inline" != no ; then | 
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|  | 419 | AC_DEFINE(HAVE_INLINE,1, ["May use inline routines"]) | 
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|  | 420 | AC_SUBST(HAVE_INLINE) | 
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|  | 421 | fi | 
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|  | 422 |  | 
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| [bd3e55] | 423 | #AC_MSG_NOTICE(["CFLAGS: $CFLAGS, CXXFLAGS: $CXXFLAGS, LDFLAGS: $LDFLAGS, CC: $CC, CXX:, $CXX, MPICC: $MPICC, MPILIBS: $MPILIBS, LIBS: $LIBS"]) | 
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| [a19da5d] | 424 |  | 
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| [0ca39c] | 425 | # test suite | 
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| [878044] | 426 |  | 
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| [5079a0] | 427 | AC_CONFIG_FILES([ | 
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| [689639] | 428 | tests/Makefile]) | 
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|  | 429 |  | 
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| [abfc95] | 430 | AC_CONFIG_TESTDIR(tests/Calculations) | 
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|  | 431 | AC_CONFIG_FILES([ | 
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|  | 432 | tests/Calculations/atlocal | 
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|  | 433 | tests/Calculations/Makefile]) | 
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|  | 434 | AC_CONFIG_FILES([tests/Calculations/molecuilder], [chmod +x tests/Calculations/molecuilder]) | 
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|  | 435 |  | 
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| [689639] | 436 | AC_CONFIG_TESTDIR(tests/CodeChecks) | 
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| [d0a719] | 437 | AC_CONFIG_FILES([ | 
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|  | 438 | tests/CodeChecks/atlocal | 
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|  | 439 | tests/CodeChecks/Makefile]) | 
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| [689639] | 440 |  | 
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| [740d40] | 441 | AC_CONFIG_TESTDIR(tests/Fragmentations) | 
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| [038713] | 442 | AC_CONFIG_FILES([ | 
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| [740d40] | 443 | tests/Fragmentations/atlocal | 
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|  | 444 | tests/Fragmentations/Makefile]) | 
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|  | 445 | AC_CONFIG_FILES([tests/Fragmentations/molecuilder], [chmod +x tests/Fragmentations/molecuilder]) | 
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| [689639] | 446 |  | 
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| [0f0407] | 447 | AC_CONFIG_TESTDIR(tests/GuiChecks) | 
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|  | 448 | AC_CONFIG_FILES([ | 
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|  | 449 | tests/GuiChecks/atlocal | 
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|  | 450 | tests/GuiChecks/Makefile]) | 
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|  | 451 | AC_CONFIG_FILES([tests/GuiChecks/molecuilder], [chmod +x tests/GuiChecks/molecuilder]) | 
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|  | 452 | AC_CONFIG_FILES([tests/GuiChecks/molecuilderguitest], [chmod +x tests/GuiChecks/molecuilderguitest]) | 
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| [c66ae6] | 453 | AC_CONFIG_FILES([tests/GuiChecks/adjacencymatcher], [chmod +x tests/GuiChecks/adjacencymatcher]) | 
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| [42b40a] | 454 | AC_CONFIG_FILES([tests/GuiChecks/trianglematcher], [chmod +x tests/GuiChecks/trianglematcher]) | 
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| [0f0407] | 455 |  | 
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| [004d5c] | 456 | AC_CONFIG_TESTDIR(tests/JobMarket) | 
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|  | 457 | AC_CONFIG_FILES([ | 
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|  | 458 | tests/JobMarket/atlocal | 
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|  | 459 | tests/JobMarket/Makefile]) | 
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|  | 460 | AC_CONFIG_FILES([tests/JobMarket/molecuilder], [chmod +x tests/JobMarket/molecuilder]) | 
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|  | 461 |  | 
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| [689639] | 462 | AC_CONFIG_TESTDIR(tests/regression) | 
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|  | 463 | AC_CONFIG_FILES([ | 
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|  | 464 | tests/regression/atlocal | 
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|  | 465 | tests/regression/Makefile]) | 
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|  | 466 | AC_CONFIG_FILES([tests/regression/molecuilder], [chmod +x tests/regression/molecuilder]) | 
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| [c66ae6] | 467 | AC_CONFIG_FILES([tests/regression/adjacencymatcher], [chmod +x tests/regression/adjacencymatcher]) | 
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| [7d146a] | 468 | AC_CONFIG_FILES([tests/regression/trianglematcher], [chmod +x tests/regression/trianglematcher]) | 
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| [893426] | 469 | AC_CONFIG_FILES([tests/regression/runpython], [chmod +x tests/regression/runpython]) | 
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| [689639] | 470 |  | 
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|  | 471 | AC_CONFIG_TESTDIR(tests/Tesselations) | 
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| [5079a0] | 472 | AC_CONFIG_FILES([ | 
|---|
| [a85f45] | 473 | tests/Tesselations/atlocal | 
|---|
|  | 474 | tests/Tesselations/Makefile]) | 
|---|
|  | 475 | AC_CONFIG_FILES([tests/Tesselations/molecuilder], [chmod +x tests/Tesselations/molecuilder]) | 
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| [7d146a] | 476 | AC_CONFIG_FILES([tests/Tesselations/trianglematcher], [chmod +x tests/Tesselations/trianglematcher]) | 
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| [689639] | 477 |  | 
|---|
| [5079a0] | 478 | AC_CONFIG_FILES([ | 
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|  | 479 | doc/molecuilder.xml]) | 
|---|
| [6029a6] | 480 | AC_CONFIG_FILES([ | 
|---|
|  | 481 | doc/userguide/catalog.xml:doc/userguide/catalog.xml.in]) | 
|---|
| [861874] | 482 | AC_CONFIG_FILES([ | 
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| [878044] | 483 | MoleCuilder.pc:MoleCuilder.pc.in]) | 
|---|
| [5079a0] | 484 | AC_CONFIG_FILES([ | 
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| [ec188c] | 485 | doc/Makefile | 
|---|
| [6029a6] | 486 | doc/userguide/Makefile | 
|---|
|  | 487 | ]) | 
|---|
|  | 488 | AC_CONFIG_FILES([ | 
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|  | 489 | Makefile | 
|---|
| [938ffd] | 490 | src/Makefile | 
|---|
| [c66ae6] | 491 | src/Bond/AdjacencyMatcher/Makefile | 
|---|
| [7d146a] | 492 | src/Tesselation/TriangleMatcher/Makefile | 
|---|
| [5b991a] | 493 | data/icons/Makefile | 
|---|
| [04e1fb] | 494 | utils/Makefile | 
|---|
| [85949a] | 495 | ]) | 
|---|
|  | 496 | AC_CONFIG_FILES([ | 
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| [878044] | 497 | src/unittests/Makefile | 
|---|
| [85949a] | 498 | ]) | 
|---|
| [d0b3aca] | 499 |  | 
|---|
| [c015b3] | 500 | # produce python scripts and tests only when python's present | 
|---|
| [24e19e] | 501 | AC_CONFIG_TESTDIR([tests/Python]) | 
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|  | 502 | AC_CONFIG_FILES([tests/Python/atlocal]) | 
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| [c015b3] | 503 | AM_COND_IF([CONDPYTHON],[ | 
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| [9fd196] | 504 | AC_CONFIG_FILES([utils/Python/boxmaker.py:utils/Python/boxmaker.py.in], [chmod +x utils/Python/boxmaker.py]) | 
|---|
|  | 505 | AC_CONFIG_FILES([utils/Python/python_wrapper:utils/Python/python_wrapper.in], [chmod +x utils/Python/python_wrapper]) | 
|---|
| [c015b3] | 506 | AC_CONFIG_FILES([tests/Python/run], [chmod +x tests/Python/run]) | 
|---|
|  | 507 | ]) | 
|---|
| [24e19e] | 508 | AC_CONFIG_FILES([tests/Python/Makefile]) | 
|---|
| [d0b3aca] | 509 |  | 
|---|
| [14de469] | 510 | AC_OUTPUT | 
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