| [0b990d] | 1 | //
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 | 2 | // memmtmpi.cc
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 | 3 | // based on memmpi.cc
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 | 4 | //
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 | 5 | // Copyright (C) 1996 Limit Point Systems, Inc.
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 | 6 | //
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 | 7 | // Author: Curtis Janssen <cljanss@limitpt.com>
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 | 8 | // Maintainer: LPS
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 | 9 | //
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 | 10 | // This file is part of the SC Toolkit.
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 | 11 | //
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 | 12 | // The SC Toolkit is free software; you can redistribute it and/or modify
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 | 13 | // it under the terms of the GNU Library General Public License as published by
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 | 14 | // the Free Software Foundation; either version 2, or (at your option)
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 | 15 | // any later version.
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 | 16 | //
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 | 17 | // The SC Toolkit is distributed in the hope that it will be useful,
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 | 18 | // but WITHOUT ANY WARRANTY; without even the implied warranty of
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 | 19 | // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
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 | 20 | // GNU Library General Public License for more details.
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 | 21 | //
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 | 22 | // You should have received a copy of the GNU Library General Public License
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 | 23 | // along with the SC Toolkit; see the file COPYING.LIB.  If not, write to
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 | 24 | // the Free Software Foundation, 675 Mass Ave, Cambridge, MA 02139, USA.
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 | 25 | //
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 | 26 | // The U.S. Government is granted a limited license as per AL 91-7.
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 | 27 | //
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 | 28 | 
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 | 29 | #ifndef _util_group_memmtmpi_cc
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 | 30 | #define _util_group_memmtmpi_cc
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 | 31 | 
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 | 32 | #ifdef __GNUC__
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 | 33 | #pragma implementation
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 | 34 | #endif
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 | 35 | 
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 | 36 | #include <assert.h>
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 | 37 | 
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 | 38 | #include <util/misc/formio.h>
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 | 39 | #include <util/group/messmpi.h>
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 | 40 | #include <util/group/memmtmpi.h>
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 | 41 | 
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 | 42 | #define MPICH_SKIP_MPICXX
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 | 43 | #include <mpi.h>
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 | 44 | 
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 | 45 | using namespace std;
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 | 46 | 
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 | 47 | // Define this to use immediate mode.  This was added added to work
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 | 48 | // around bugs in non-immediate mode optimizations in an MPI impl.
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 | 49 | #undef USE_IMMEDIATE_MODE
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 | 50 | 
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 | 51 | namespace sc {
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 | 52 | 
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 | 53 | static const int dbufsize = 32768;
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 | 54 | 
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 | 55 | ///////////////////////////////////////////////////////////////////////
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 | 56 | // The MTMPIThread class
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 | 57 | 
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 | 58 | class MTMPIThread: public Thread {
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 | 59 |   private:
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 | 60 |     MTMPIMemoryGrp *mem_;
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 | 61 |     int req_tag_;
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 | 62 |     int tag_;
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 | 63 |     unsigned int nreq_recd_;
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 | 64 |     double chunk[dbufsize];
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 | 65 |   public:
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 | 66 |     MTMPIThread(MTMPIMemoryGrp *, int reqtype, int tag);
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 | 67 |     void run();
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 | 68 |     int run_one();
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 | 69 |     unsigned int nreq_recd() { return nreq_recd_; }
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 | 70 |     void set_nreq_recd(unsigned int val) { nreq_recd_ = val; }
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 | 71 | };
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 | 72 | 
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 | 73 | MTMPIThread::MTMPIThread(MTMPIMemoryGrp *mem,
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 | 74 |                          int reqtype, int tag)
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 | 75 | {
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 | 76 |   mem_ = mem;
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 | 77 |   req_tag_ = reqtype;
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 | 78 |   tag_ = tag;
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 | 79 |   nreq_recd_ = 0;
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 | 80 | }
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 | 81 | 
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 | 82 | void
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 | 83 | MTMPIThread::run()
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 | 84 | {
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 | 85 |   while(run_one());
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 | 86 | }
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 | 87 | 
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 | 88 | int
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 | 89 | MTMPIThread::run_one()
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 | 90 | {
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 | 91 |   int i;
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 | 92 |   int dsize;
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 | 93 |   int dremain;
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 | 94 |   int doffset;
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 | 95 |   long l;
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 | 96 |   MemoryDataRequest req;
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 | 97 |   MPI_Status status;
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 | 98 | #ifndef USE_IMMEDIATE_MODE
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 | 99 |   MPI_Recv(req.data(),req.nbytes(),MPI_BYTE,MPI_ANY_SOURCE,
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 | 100 |            req_tag_,mem_->comm_comm_,&status);
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 | 101 | #else
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 | 102 |   MPI_Request mpireq;
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 | 103 |   MPI_Irecv(req.data(),req.nbytes(),MPI_BYTE,MPI_ANY_SOURCE,
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 | 104 |            req_tag_,mem_->comm_comm_,&mpireq);
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 | 105 |   MPI_Wait(&mpireq,&status);
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 | 106 | #endif // USE_IMMEDIATE_MODE
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 | 107 |   int rtag = req.serial_number();
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 | 108 |   if (mem_->debug_) {
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 | 109 |       mem_->print_lock_->lock();
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 | 110 |       req.print("RECV",mem_->hout);
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 | 111 |       mem_->print_lock_->unlock();
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 | 112 |     }
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 | 113 |   if (req.touches_data()) {
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 | 114 |       assert(req.size() >= 0);
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 | 115 |       if (req.offset()+req.size() > mem_->localsize()) {
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 | 116 |           mem_->print_lock_->lock();
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 | 117 |           req.print("BAD RECV");
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 | 118 |           ExEnv::outn() << "mem_->localsize() = " << mem_->localsize() << endl;
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 | 119 |           mem_->print_lock_->lock();
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 | 120 |         }
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 | 121 |       assert(req.offset()+req.size() <= mem_->localsize());
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 | 122 |     }
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 | 123 |   switch (req.request()) {
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 | 124 |   case MemoryDataRequest::Deactivate:
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 | 125 |       return 0;
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 | 126 |   case MemoryDataRequest::Retrieve:
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 | 127 |       nreq_recd_++;
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 | 128 |       if (req.lock())
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 | 129 |           mem_->obtain_local_lock(req.offset(), req.offset()+req.size());
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 | 130 |       MPI_Send(&mem_->data_[req.offset()],req.size(),MPI_BYTE,
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 | 131 |                req.node(),rtag,mem_->comp_comm_);
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 | 132 |       break;
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 | 133 |   case MemoryDataRequest::Replace:
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 | 134 |       nreq_recd_++;
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 | 135 |       // May be able to get rid of this MPI_Send - MLL
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 | 136 |       MPI_Send(&tag_,1,MPI_INT,req.node(),rtag,mem_->comp_comm_);
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 | 137 |       MPI_Recv(&mem_->data_[req.offset()],req.size(),MPI_BYTE,
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 | 138 |                req.node(),tag_,mem_->comm_comm_,&status);
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 | 139 |       if (req.lock())
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 | 140 |           mem_->release_local_lock(req.offset(), req.offset()+req.size());
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 | 141 |       break;
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 | 142 |   case MemoryDataRequest::DoubleSum:
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 | 143 |       nreq_recd_++;
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 | 144 | //      MPI_Send(&tag_,1,MPI_INT,req.node(),rtag,mem_->comm_);
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 | 145 |       dsize = req.size()/sizeof(double);
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 | 146 |       dremain = dsize;
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 | 147 |       doffset = req.offset()/sizeof(double);
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 | 148 |       mem_->obtain_local_lock(req.offset(), req.offset()+req.size());
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 | 149 |       while(dremain>0) {
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 | 150 |           int dchunksize = dbufsize;
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 | 151 |           if (dremain < dchunksize) dchunksize = dremain;
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 | 152 | #ifndef USE_IMMEDIATE_MODE
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 | 153 |           MPI_Recv(chunk,dchunksize,MPI_DOUBLE,
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 | 154 |                    req.node(),rtag ,mem_->comm_comm_,&status);
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 | 155 | #else
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 | 156 |           MPI_Request mpireq;
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 | 157 |           MPI_Irecv(chunk,dchunksize,MPI_DOUBLE,
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 | 158 |                    req.node(),rtag ,mem_->comm_comm_,&mpireq);
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 | 159 |           MPI_Wait(&mpireq,&status);
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 | 160 | #endif // USE_IMMEDIATE_MODE
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 | 161 |           double *source_data = &((double*)mem_->data_)[doffset];
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 | 162 |           for (i=0; i<dchunksize; i++) {
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 | 163 |               source_data[i] += chunk[i];
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 | 164 |             }
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 | 165 |           dremain -= dchunksize;
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 | 166 |           doffset += dchunksize;
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 | 167 |         }
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 | 168 |       mem_->release_local_lock(req.offset(), req.offset()+req.size());
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 | 169 |       break;
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 | 170 |   default:
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 | 171 |       mem_->print_lock_->lock();
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 | 172 |       ExEnv::outn() << "MTMPIThread: bad memory data request" << endl;
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 | 173 |       mem_->print_lock_->unlock();
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 | 174 |       abort();
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 | 175 |     }
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 | 176 |   return 1;
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 | 177 | }
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 | 178 | 
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 | 179 | ///////////////////////////////////////////////////////////////////////
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 | 180 | // The MTMPIMemoryGrp class
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 | 181 | 
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 | 182 | static ClassDesc MTMPIMemoryGrp_cd(
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 | 183 |   typeid(MTMPIMemoryGrp),"MTMPIMemoryGrp",1,"public ActiveMsgMemoryGrp",
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 | 184 |   0, create<MTMPIMemoryGrp>, 0);
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 | 185 | 
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 | 186 | MTMPIMemoryGrp::MTMPIMemoryGrp(const Ref<MessageGrp>& msg,
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 | 187 |                                const Ref<ThreadGrp>& th,
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 | 188 |                                MPI_Comm comm):
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 | 189 |   ActiveMsgMemoryGrp(msg)
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 | 190 | {
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 | 191 |   if (debug_) ExEnv::outn() << "MTMPIMemoryGrp CTOR entered" << endl;
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 | 192 | 
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 | 193 |   th_ = th;
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 | 194 | 
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 | 195 |   init_mtmpimg(comm,th_->nthread());
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 | 196 | }
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 | 197 | 
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 | 198 | MTMPIMemoryGrp::MTMPIMemoryGrp(const Ref<KeyVal>& keyval):
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 | 199 |   ActiveMsgMemoryGrp(keyval)
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 | 200 | {
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 | 201 |   if (debug_) ExEnv::outn() << "MTMPIMemoryGrp keyval CTOR entered" << endl;
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 | 202 | 
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 | 203 |   th_ = ThreadGrp::get_default_threadgrp();
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 | 204 | 
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 | 205 |   KeyValValueint nthreaddef(th_->nthread());
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 | 206 |   int nthread = keyval->intvalue("num_threads",nthreaddef);
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 | 207 |   ExEnv::out0() << indent << "MTMPIMemoryGrp: num_threads = " << nthread << endl;
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 | 208 | 
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 | 209 |   init_mtmpimg(MPI_COMM_WORLD,nthread);
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 | 210 | }
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 | 211 | 
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 | 212 | MTMPIMemoryGrp::~MTMPIMemoryGrp()
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 | 213 | {
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 | 214 |   deactivate();
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 | 215 |   for (int i=0; i<th_->nthread()-1; i++) {
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 | 216 |       delete thread_[i];
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 | 217 |     }
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 | 218 |   delete[] thread_;
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 | 219 |   delete[] nreq_sent_;
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 | 220 |   delete[] nreq_sent_buf_;
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 | 221 | }
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 | 222 | 
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 | 223 | void
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 | 224 | MTMPIMemoryGrp::init_mtmpimg(MPI_Comm comm, int nthread)
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 | 225 | {
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 | 226 |   int i;
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 | 227 |   active_ = 0;
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 | 228 | 
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 | 229 |   if (nthread < 2) nthread = 2;
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 | 230 |   th_ = th_->clone(nthread);
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 | 231 |   nthread = th_->nthread();
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 | 232 | 
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 | 233 |   if (debug_) {
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 | 234 |       char name[256];
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 | 235 |       sprintf(name, "mpqc.hand.%d", me());
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 | 236 |       hout.open(name);
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 | 237 |       sprintf(name, "mpqc.main.%d", me());
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 | 238 |       mout.open(name);
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 | 239 |     }
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 | 240 | 
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 | 241 |   MPI_Comm_dup(comm, &comp_comm_);
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 | 242 |   MPI_Comm_dup(comm, &comm_comm_);
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 | 243 | 
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| [fc38cb] | 244 |   MPI_Comm_set_errhandler(comp_comm_, MPI_ERRORS_ARE_FATAL);
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 | 245 |   MPI_Comm_set_errhandler(comm_comm_, MPI_ERRORS_ARE_FATAL);
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| [0b990d] | 246 | 
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 | 247 |   serial_ = 0;
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 | 248 |   req_tag_ = 15001;
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 | 249 | 
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 | 250 |   serial_lock_ = th_->new_lock();
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 | 251 | 
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 | 252 |   thread_ = new MTMPIThread*[nthread-1];
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 | 253 |   th_->add_thread(0,0);
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 | 254 |   for (i=1; i<nthread; i++) {
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 | 255 |       thread_[i-1] = new MTMPIThread(this,req_tag_,req_tag_ + i);
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 | 256 |       th_->add_thread(i,thread_[i-1]);
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 | 257 |     }
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 | 258 |   print_lock_ = th_->new_lock();
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 | 259 | 
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 | 260 |   nreq_sent_ = new unsigned int[n()];
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 | 261 |   memset(nreq_sent_, 0, sizeof(unsigned int)*n());
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 | 262 |   nreq_sent_buf_ = new unsigned int[n()];
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 | 263 | }
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 | 264 | 
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 | 265 | int
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 | 266 | MTMPIMemoryGrp::serial(int node)
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 | 267 | {
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 | 268 |   serial_lock_->lock();
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 | 269 |   nreq_sent_[node]++;
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 | 270 |   int r = serial_;
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 | 271 |   serial_++;
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 | 272 |   if (serial_ == req_tag_) serial_ = 0;
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 | 273 |   serial_lock_->unlock();
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 | 274 |   return r;
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 | 275 | }
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 | 276 | 
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 | 277 | void
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 | 278 | MTMPIMemoryGrp::retrieve_data(void *data, int node, int offset, int size,
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 | 279 |                               int lock)
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 | 280 | {
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 | 281 |   MemoryDataRequest req(MemoryDataRequest::Retrieve,me(),offset,size,lock,
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 | 282 |                         serial(node));
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 | 283 |   int tag = req.serial_number();
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 | 284 | 
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 | 285 |   // send the request
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 | 286 |   if (debug_) {
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 | 287 |       print_lock_->lock();
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 | 288 |       req.print("SEND",mout);
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 | 289 |       print_lock_->unlock();
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 | 290 |     }
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 | 291 |   MPI_Send(req.data(),req.nbytes(),MPI_BYTE,node,req_tag_,comm_comm_);
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 | 292 | 
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 | 293 |   // receive the data
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 | 294 |   MPI_Status status;
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 | 295 |   MPI_Recv(data,size,MPI_BYTE,node,tag,comp_comm_,&status);
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 | 296 | }
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 | 297 | 
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 | 298 | void
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 | 299 | MTMPIMemoryGrp::replace_data(void *data, int node, int offset, int size,
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 | 300 |                              int unlock)
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 | 301 | {
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 | 302 |   MemoryDataRequest req(MemoryDataRequest::Replace,me(),offset,size,unlock,
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 | 303 |                         serial(node));
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 | 304 |   int tag = req.serial_number();
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 | 305 | 
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 | 306 |   if (debug_) {
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 | 307 |       print_lock_->lock();
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 | 308 |       req.print("SEND",mout);
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 | 309 |       print_lock_->unlock();
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 | 310 |     }
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 | 311 |   MPI_Send(req.data(),req.nbytes(),MPI_BYTE,node,req_tag_,comm_comm_);
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 | 312 | 
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 | 313 |   // wait for the go ahead message
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 | 314 |   MPI_Status status;
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 | 315 |   int rtag;
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 | 316 |   MPI_Recv(&rtag,1,MPI_INT,node,tag,comp_comm_,&status);
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 | 317 | 
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 | 318 |   // send the data
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 | 319 |   MPI_Send(data,size,MPI_BYTE,node,rtag,comm_comm_);
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 | 320 | }
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 | 321 | 
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 | 322 | void
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 | 323 | MTMPIMemoryGrp::sum_data(double *data, int node, int offset, int size)
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 | 324 | {
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 | 325 |   MemoryDataRequest req(MemoryDataRequest::DoubleSum,me(),offset,size,
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 | 326 |                         0, serial(node));
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 | 327 |   int tag = req.serial_number();
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 | 328 | 
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 | 329 |   // send the request
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 | 330 |   if (debug_) {
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 | 331 |       print_lock_->lock();
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 | 332 |       req.print("SEND",mout);
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 | 333 |       print_lock_->unlock();
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 | 334 |     }
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 | 335 | #ifndef USE_IMMEDIATE_MODE
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 | 336 |   MPI_Send(req.data(),req.nbytes(),MPI_BYTE,node,req_tag_,comm_comm_);
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 | 337 | #else
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 | 338 |   MPI_Status status;
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 | 339 |   MPI_Request mpireq;
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 | 340 |   MPI_Isend(req.data(),req.nbytes(),MPI_BYTE,node,req_tag_,comm_comm_,&mpireq);
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 | 341 |   MPI_Wait(&mpireq,&status);
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 | 342 | #endif // USE_IMMEDIATE_MODE
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 | 343 | 
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 | 344 |   // wait for the go ahead message
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 | 345 | //  MPI_Status status;
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 | 346 | //  int rtag;
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 | 347 | //  MPI_Recv(&rtag,1,MPI_INT,node,tag,comm_,&status);
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 | 348 | 
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 | 349 |   int dsize = size/sizeof(double);
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 | 350 |   int dremain = dsize;
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 | 351 |   int dcurrent = 0;
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 | 352 |   while(dremain>0) {
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 | 353 |       int dchunksize = dbufsize;
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 | 354 |       if (dremain < dchunksize) dchunksize = dremain;
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 | 355 |       // send the data
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 | 356 | #ifndef USE_IMMEDIATE_MODE
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 | 357 |       MPI_Send(&data[dcurrent],dchunksize,MPI_DOUBLE,
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 | 358 |                node,tag,comm_comm_);
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 | 359 | #else
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 | 360 |       MPI_Request mpireq;
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 | 361 |       MPI_Isend(&data[dcurrent],dchunksize,MPI_DOUBLE,
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 | 362 |                node,tag,comm_comm_,&mpireq);
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 | 363 |       MPI_Wait(&mpireq,&status);
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 | 364 | #endif // USE_IMMEDIATE_MODE
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 | 365 |       dcurrent += dchunksize;
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 | 366 |       dremain -= dchunksize;
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 | 367 |     }
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 | 368 | }
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 | 369 | 
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 | 370 | void
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 | 371 | MTMPIMemoryGrp::activate()
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 | 372 | {
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 | 373 |   // Only remote requests require the handler.  There are only remote
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 | 374 |   // requests if there is more than one node.
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 | 375 |   if (n() == 1) return;
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 | 376 | 
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 | 377 |   if (th_->nthread() < 2) {
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 | 378 |       ExEnv::outn() << "MTMPIMemoryGrp didn't get enough threads" << endl;
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 | 379 |       abort();
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 | 380 |     }
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 | 381 | 
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 | 382 |   if (active_) return;
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 | 383 |   active_ = 1;
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 | 384 | 
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 | 385 |   th_->start_threads();
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 | 386 | }
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 | 387 | 
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 | 388 | void
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 | 389 | MTMPIMemoryGrp::deactivate()
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 | 390 | {
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 | 391 |   if (!active_) return;
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 | 392 |   active_ = 0;
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 | 393 | 
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 | 394 |   // send a shutdown message
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 | 395 |   MemoryDataRequest req(MemoryDataRequest::Deactivate);
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 | 396 |   if (debug_) {
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 | 397 |       print_lock_->lock();
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 | 398 |       req.print("SEND",mout);
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 | 399 |       print_lock_->unlock();
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 | 400 |     }
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 | 401 |   for (int i=1; i<th_->nthread(); i++) {
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 | 402 | #ifndef USE_IMMEDIATE_MODE
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 | 403 |       MPI_Send(req.data(),req.nbytes(),MPI_BYTE,me(),req_tag_,comm_comm_);
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 | 404 | #else
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 | 405 |       MPI_Request mpireq;
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 | 406 |       MPI_Status status;
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 | 407 |       MPI_Isend(req.data(),req.nbytes(),MPI_BYTE,me(),req_tag_,comm_comm_,&mpireq);
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 | 408 |       MPI_Wait(&mpireq,&status);
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 | 409 | #endif // USE_IMMEDIATE_MODE
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 | 410 |     }
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 | 411 | 
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 | 412 |   // wait on the thread to shutdown
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 | 413 |   th_->wait_threads();
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 | 414 | }
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 | 415 | 
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 | 416 | void
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 | 417 | MTMPIMemoryGrp::sync()
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 | 418 | {
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 | 419 |   if (active_) {
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 | 420 |       MPI_Allreduce(nreq_sent_, nreq_sent_buf_,
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 | 421 |                     n(), MPI_UNSIGNED, MPI_SUM, comm_comm_);
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 | 422 |       deactivate();
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 | 423 |       unsigned int nreq_recd = 0;
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 | 424 |       for (int i=0; i<th_->nthread()-1; i++) {
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 | 425 |           nreq_recd += thread_[i]->nreq_recd();
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 | 426 |           thread_[i]->set_nreq_recd(0);
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 | 427 |         }
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 | 428 |       int n_outstanding = nreq_sent_buf_[me()] - nreq_recd;
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 | 429 |       for (int i=0; i<n_outstanding; i++) {
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 | 430 |           thread_[0]->run_one();
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 | 431 |         }
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 | 432 |       memset(nreq_sent_, 0, sizeof(unsigned int)*n());
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 | 433 |       // Make sure processing of all outstanding requests is finished
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 | 434 |       // before starting the next phase.
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 | 435 |       MPI_Barrier(comm_comm_);
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 | 436 |       activate();
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 | 437 |     }
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 | 438 |   else {
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 | 439 |       MPI_Barrier(comm_comm_);
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 | 440 |     }
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 | 441 | }
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 | 442 | 
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 | 443 | #endif
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 | 444 | 
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 | 445 | /////////////////////////////////////////////////////////////////////////////
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 | 446 | 
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 | 447 | }
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 | 448 | 
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 | 449 | // Local Variables:
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 | 450 | // mode: c++
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 | 451 | // c-file-style: "CLJ"
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 | 452 | // End:
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