| 1 | // | 
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| 2 | // distrect.cc | 
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| 3 | // | 
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| 4 | // Copyright (C) 1996 Limit Point Systems, Inc. | 
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| 5 | // | 
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| 6 | // Author: Curtis Janssen <cljanss@limitpt.com> | 
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| 7 | // Maintainer: LPS | 
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| 8 | // | 
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| 9 | // This file is part of the SC Toolkit. | 
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| 10 | // | 
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| 11 | // The SC Toolkit is free software; you can redistribute it and/or modify | 
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| 12 | // it under the terms of the GNU Library General Public License as published by | 
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| 13 | // the Free Software Foundation; either version 2, or (at your option) | 
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| 14 | // any later version. | 
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| 15 | // | 
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| 16 | // The SC Toolkit is distributed in the hope that it will be useful, | 
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| 17 | // but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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| 18 | // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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| 19 | // GNU Library General Public License for more details. | 
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| 20 | // | 
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| 21 | // You should have received a copy of the GNU Library General Public License | 
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| 22 | // along with the SC Toolkit; see the file COPYING.LIB.  If not, write to | 
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| 23 | // the Free Software Foundation, 675 Mass Ave, Cambridge, MA 02139, USA. | 
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| 24 | // | 
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| 25 | // The U.S. Government is granted a limited license as per AL 91-7. | 
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| 26 | // | 
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| 27 |  | 
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| 28 | #include <iostream> | 
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| 29 | #include <iomanip> | 
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| 30 | #include <stdlib.h> | 
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| 31 | #include <math.h> | 
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| 32 |  | 
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| 33 | #include <util/misc/formio.h> | 
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| 34 | #include <util/keyval/keyval.h> | 
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| 35 | #include <math/scmat/dist.h> | 
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| 36 | #include <math/scmat/cmatrix.h> | 
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| 37 | #include <math/scmat/elemop.h> | 
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| 38 |  | 
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| 39 | using namespace std; | 
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| 40 | using namespace sc; | 
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| 41 |  | 
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| 42 | #define DEBUG 0 | 
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| 43 |  | 
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| 44 | ///////////////////////////////////////////////////////////////////////////// | 
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| 45 |  | 
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| 46 | static void | 
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| 47 | fail(const char *m) | 
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| 48 | { | 
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| 49 | ExEnv::errn() << indent << "distrect.cc: error: " << m << endl; | 
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| 50 | abort(); | 
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| 51 | } | 
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| 52 |  | 
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| 53 | ///////////////////////////////////////////////////////////////////////////// | 
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| 54 | // DistSCMatrix member functions | 
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| 55 |  | 
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| 56 | static ClassDesc DistSCMatrix_cd( | 
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| 57 | typeid(DistSCMatrix),"DistSCMatrix",1,"public SCMatrix", | 
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| 58 | 0, 0, 0); | 
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| 59 |  | 
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| 60 | DistSCMatrix::DistSCMatrix(const RefSCDimension&a,const RefSCDimension&b, | 
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| 61 | DistSCMatrixKit*k): | 
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| 62 | SCMatrix(a,b,k) | 
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| 63 | { | 
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| 64 | init_blocklist(); | 
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| 65 | } | 
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| 66 |  | 
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| 67 | int | 
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| 68 | DistSCMatrix::block_to_node(int i, int j) const | 
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| 69 | { | 
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| 70 | return (i*d2->blocks()->nblock() + j)%messagegrp()->n(); | 
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| 71 | } | 
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| 72 |  | 
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| 73 | Ref<SCMatrixBlock> | 
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| 74 | DistSCMatrix::block_to_block(int i, int j) const | 
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| 75 | { | 
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| 76 | int offset = i*d2->blocks()->nblock() + j; | 
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| 77 | int nproc = messagegrp()->n(); | 
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| 78 |  | 
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| 79 | if ((offset%nproc) != messagegrp()->me()) return 0; | 
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| 80 |  | 
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| 81 | SCMatrixBlockListIter I; | 
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| 82 | for (I=blocklist->begin(); I!=blocklist->end(); I++) { | 
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| 83 | if (I.block()->blocki == i && I.block()->blockj == j) | 
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| 84 | return I.block(); | 
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| 85 | } | 
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| 86 |  | 
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| 87 | ExEnv::errn() << indent << "DistSCMatrix::block_to_block: internal error" << endl; | 
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| 88 | abort(); | 
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| 89 | return 0; | 
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| 90 | } | 
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| 91 |  | 
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| 92 | double * | 
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| 93 | DistSCMatrix::find_element(int i, int j) const | 
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| 94 | { | 
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| 95 | int bi, oi; | 
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| 96 | d1->blocks()->elem_to_block(i, bi, oi); | 
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| 97 |  | 
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| 98 | int bj, oj; | 
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| 99 | d2->blocks()->elem_to_block(j, bj, oj); | 
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| 100 |  | 
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| 101 | Ref<SCMatrixRectBlock> blk | 
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| 102 | = dynamic_cast<SCMatrixRectBlock*>(block_to_block(bi, bj).pointer()); | 
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| 103 | if (blk.nonnull()) { | 
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| 104 | return &blk->data[oi*(blk->jend-blk->jstart)+oj]; | 
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| 105 | } | 
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| 106 | else { | 
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| 107 | return 0; | 
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| 108 | } | 
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| 109 | } | 
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| 110 |  | 
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| 111 | int | 
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| 112 | DistSCMatrix::element_to_node(int i, int j) const | 
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| 113 | { | 
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| 114 | int bi, oi; | 
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| 115 | d1->blocks()->elem_to_block(i, bi, oi); | 
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| 116 |  | 
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| 117 | int bj, oj; | 
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| 118 | d2->blocks()->elem_to_block(j, bj, oj); | 
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| 119 |  | 
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| 120 | return block_to_node(bi,bj); | 
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| 121 | } | 
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| 122 |  | 
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| 123 | void | 
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| 124 | DistSCMatrix::init_blocklist() | 
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| 125 | { | 
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| 126 | int i, j, index; | 
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| 127 | int me = messagegrp()->me(); | 
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| 128 | blocklist = new SCMatrixBlockList; | 
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| 129 | for (i=0, index=0; i<d1->blocks()->nblock(); i++) { | 
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| 130 | for (j=0; j<d2->blocks()->nblock(); j++, index++) { | 
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| 131 | if (block_to_node(i,j) == me) { | 
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| 132 | Ref<SCMatrixBlock> b | 
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| 133 | = new SCMatrixRectBlock(d1->blocks()->start(i), | 
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| 134 | d1->blocks()->fence(i), | 
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| 135 | d2->blocks()->start(j), | 
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| 136 | d2->blocks()->fence(j)); | 
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| 137 | b->blocki = i; | 
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| 138 | b->blockj = j; | 
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| 139 | blocklist->append(b); | 
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| 140 | } | 
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| 141 | } | 
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| 142 | } | 
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| 143 | } | 
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| 144 |  | 
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| 145 | DistSCMatrix::~DistSCMatrix() | 
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| 146 | { | 
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| 147 | } | 
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| 148 |  | 
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| 149 | double | 
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| 150 | DistSCMatrix::get_element(int i,int j) const | 
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| 151 | { | 
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| 152 | double res; | 
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| 153 | double *e = find_element(i,j); | 
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| 154 | if (e) { | 
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| 155 | res = *e; | 
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| 156 | messagegrp()->bcast(res, messagegrp()->me()); | 
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| 157 | } | 
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| 158 | else { | 
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| 159 | messagegrp()->bcast(res, element_to_node(i, j)); | 
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| 160 | } | 
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| 161 | return res; | 
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| 162 | } | 
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| 163 |  | 
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| 164 | void | 
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| 165 | DistSCMatrix::set_element(int i,int j,double a) | 
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| 166 | { | 
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| 167 | double *e = find_element(i,j); | 
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| 168 | if (e) { | 
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| 169 | *e = a; | 
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| 170 | } | 
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| 171 | } | 
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| 172 |  | 
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| 173 | void | 
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| 174 | DistSCMatrix::accumulate_element(int i,int j,double a) | 
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| 175 | { | 
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| 176 | double *e = find_element(i,j); | 
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| 177 | if (e) { | 
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| 178 | *e += a; | 
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| 179 | } | 
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| 180 | } | 
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| 181 |  | 
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| 182 | SCMatrix * | 
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| 183 | DistSCMatrix::get_subblock(int br, int er, int bc, int ec) | 
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| 184 | { | 
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| 185 | error("get_subblock"); | 
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| 186 | return 0; | 
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| 187 | } | 
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| 188 |  | 
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| 189 | void | 
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| 190 | DistSCMatrix::assign_subblock(SCMatrix*sb, int br, int er, int bc, int ec, | 
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| 191 | int source_br, int source_bc) | 
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| 192 | { | 
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| 193 | error("assign_subblock"); | 
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| 194 | } | 
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| 195 |  | 
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| 196 | void | 
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| 197 | DistSCMatrix::accumulate_subblock(SCMatrix*sb, int br, int er, int bc, int ec, | 
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| 198 | int source_br, int source_bc) | 
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| 199 | { | 
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| 200 | error("accumulate_subblock"); | 
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| 201 | } | 
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| 202 |  | 
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| 203 | SCVector * | 
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| 204 | DistSCMatrix::get_row(int i) | 
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| 205 | { | 
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| 206 | error("get_row"); | 
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| 207 | return 0; | 
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| 208 | } | 
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| 209 |  | 
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| 210 | void | 
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| 211 | DistSCMatrix::assign_row(SCVector *v, int i) | 
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| 212 | { | 
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| 213 | error("assign_row"); | 
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| 214 | } | 
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| 215 |  | 
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| 216 | void | 
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| 217 | DistSCMatrix::accumulate_row(SCVector *v, int i) | 
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| 218 | { | 
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| 219 | error("accumulate_row"); | 
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| 220 | } | 
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| 221 |  | 
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| 222 | SCVector * | 
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| 223 | DistSCMatrix::get_column(int i) | 
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| 224 | { | 
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| 225 | double *col = new double[nrow()]; | 
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| 226 |  | 
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| 227 | Ref<SCMatrixSubblockIter> iter = local_blocks(SCMatrixSubblockIter::Read); | 
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| 228 | for (iter->begin(); iter->ready(); iter->next()) { | 
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| 229 | SCMatrixRectBlock *b = dynamic_cast<SCMatrixRectBlock*>(iter->block()); | 
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| 230 | if (b->jstart > i || b->jend <= i) | 
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| 231 | continue; | 
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| 232 |  | 
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| 233 | int joff = i-b->jstart; | 
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| 234 | int jlen = b->jend-b->jstart; | 
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| 235 | int ist = 0; | 
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| 236 |  | 
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| 237 | for (int ii=b->istart; ii < b->iend; ii++,ist++) | 
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| 238 | col[ii] = b->data[ist*jlen+joff]; | 
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| 239 | } | 
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| 240 |  | 
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| 241 | SCVector * rcol = kit_->vector(rowdim()); | 
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| 242 | rcol->assign(col); | 
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| 243 |  | 
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| 244 | delete[] col; | 
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| 245 |  | 
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| 246 | return rcol; | 
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| 247 | } | 
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| 248 |  | 
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| 249 | void | 
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| 250 | DistSCMatrix::assign_column(SCVector *v, int i) | 
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| 251 | { | 
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| 252 | error("assign_column"); | 
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| 253 | } | 
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| 254 |  | 
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| 255 | void | 
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| 256 | DistSCMatrix::accumulate_column(SCVector *v, int i) | 
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| 257 | { | 
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| 258 | error("accumulate_column"); | 
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| 259 | } | 
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| 260 |  | 
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| 261 | void | 
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| 262 | DistSCMatrix::accumulate(const SCMatrix*a) | 
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| 263 | { | 
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| 264 | // make sure that the argument is of the correct type | 
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| 265 | const DistSCMatrix* la | 
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| 266 | = require_dynamic_cast<const DistSCMatrix*>(a,"DistSCMatrix::accumulate"); | 
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| 267 |  | 
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| 268 | // make sure that the dimensions match | 
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| 269 | if (!rowdim()->equiv(la->rowdim()) || !coldim()->equiv(la->coldim())) { | 
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| 270 | ExEnv::errn() << indent << "DistSCMatrix::accumulate(SCMatrix*a): " | 
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| 271 | << "dimensions don't match\n"; | 
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| 272 | abort(); | 
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| 273 | } | 
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| 274 |  | 
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| 275 | SCMatrixBlockListIter i1, i2; | 
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| 276 | for (i1=la->blocklist->begin(),i2=blocklist->begin(); | 
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| 277 | i1!=la->blocklist->end() && i2!=blocklist->end(); | 
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| 278 | i1++,i2++) { | 
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| 279 | int n = i1.block()->ndat(); | 
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| 280 | if (n != i2.block()->ndat()) { | 
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| 281 | ExEnv::errn() << indent | 
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| 282 | << "DistSCMatrixListSubblockIter::accumulate block mismatch: " | 
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| 283 | << "internal error" << endl; | 
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| 284 | abort(); | 
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| 285 | } | 
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| 286 | double *dat1 = i1.block()->dat(); | 
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| 287 | double *dat2 = i2.block()->dat(); | 
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| 288 | for (int i=0; i<n; i++) { | 
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| 289 | dat2[i] += dat1[i]; | 
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| 290 | } | 
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| 291 | } | 
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| 292 | } | 
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| 293 |  | 
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| 294 | void | 
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| 295 | DistSCMatrix::accumulate(const SymmSCMatrix*a) | 
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| 296 | { | 
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| 297 | // make sure that the argument is of the correct type | 
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| 298 | const DistSymmSCMatrix* la | 
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| 299 | = require_dynamic_cast<const DistSymmSCMatrix*>(a,"DistSCMatrix::accumulate"); | 
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| 300 |  | 
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| 301 | // make sure that the dimensions match | 
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| 302 | if (!rowdim()->equiv(la->dim()) || !coldim()->equiv(la->dim())) { | 
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| 303 | ExEnv::errn() << indent << "DistSCMatrix::accumulate(SCMatrix*a): " | 
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| 304 | << "dimensions don't match\n"; | 
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| 305 | abort(); | 
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| 306 | } | 
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| 307 |  | 
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| 308 | Ref<SCMatrixSubblockIter> I = ((SymmSCMatrix*)a)->all_blocks(SCMatrixSubblockIter::Read); | 
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| 309 | for (I->begin(); I->ready(); I->next()) { | 
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| 310 | Ref<SCMatrixBlock> block = I->block(); | 
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| 311 | if (DEBUG) | 
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| 312 | ExEnv::outn() << messagegrp()->me() << ": " | 
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| 313 | << block->class_name() | 
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| 314 | << "(" << block->blocki << ", " << block->blockj << ")" | 
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| 315 | << endl; | 
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| 316 | // see if i've got this block | 
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| 317 | Ref<SCMatrixBlock> localblock | 
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| 318 | = block_to_block(block->blocki,block->blockj); | 
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| 319 | if (localblock.nonnull()) { | 
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| 320 | // the diagonal blocks require special handling | 
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| 321 | if (block->blocki == block->blockj) { | 
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| 322 | int n = rowblocks()->size(block->blocki); | 
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| 323 | double *dat1 = block->dat(); | 
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| 324 | double *dat2 = localblock->dat(); | 
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| 325 | for (int i=0; i<n; i++) { | 
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| 326 | for (int j=0; j<i; j++) { | 
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| 327 | double tmp = *dat1; | 
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| 328 | dat2[i*n+j] += tmp; | 
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| 329 | dat2[j*n+i] += tmp; | 
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| 330 | dat1++; | 
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| 331 | } | 
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| 332 | dat2[i*n+i] = *dat1++; | 
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| 333 | } | 
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| 334 | } | 
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| 335 | else { | 
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| 336 | int n = block->ndat(); | 
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| 337 | double *dat1 = block->dat(); | 
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| 338 | double *dat2 = localblock->dat(); | 
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| 339 | for (int i=0; i<n; i++) { | 
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| 340 | dat2[i] += dat1[i]; | 
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| 341 | } | 
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| 342 | } | 
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| 343 | } | 
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| 344 | // now for the transpose | 
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| 345 | if (block->blocki != block->blockj) { | 
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| 346 | localblock = block_to_block(block->blockj,block->blocki); | 
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| 347 | if (localblock.nonnull()) { | 
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| 348 | int nr = rowblocks()->size(block->blocki); | 
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| 349 | int nc = rowblocks()->size(block->blockj); | 
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| 350 | double *dat1 = block->dat(); | 
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| 351 | double *dat2 = localblock->dat(); | 
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| 352 | for (int i=0; i<nr; i++) { | 
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| 353 | for (int j=0; j<nc; j++) { | 
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| 354 | dat2[j*nr+i] += *dat1++; | 
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| 355 | } | 
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| 356 | } | 
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| 357 | } | 
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| 358 | } | 
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| 359 | } | 
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| 360 | } | 
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| 361 |  | 
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| 362 | void | 
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| 363 | DistSCMatrix::accumulate(const DiagSCMatrix*a) | 
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| 364 | { | 
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| 365 | // make sure that the argument is of the correct type | 
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| 366 | const DistDiagSCMatrix* la | 
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| 367 | = require_dynamic_cast<const DistDiagSCMatrix*>(a,"DistSCMatrix::accumulate"); | 
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| 368 |  | 
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| 369 | // make sure that the dimensions match | 
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| 370 | if (!rowdim()->equiv(la->dim()) || !coldim()->equiv(la->dim())) { | 
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| 371 | ExEnv::errn() << indent << "DistSCMatrix::accumulate(SCMatrix*a): " | 
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| 372 | << "dimensions don't match\n"; | 
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| 373 | abort(); | 
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| 374 | } | 
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| 375 |  | 
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| 376 | Ref<SCMatrixSubblockIter> I = ((DiagSCMatrix*)a)->all_blocks(SCMatrixSubblockIter::Read); | 
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| 377 | for (I->begin(); I->ready(); I->next()) { | 
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| 378 | Ref<SCMatrixBlock> block = I->block(); | 
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| 379 | // see if i've got this block | 
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| 380 | Ref<SCMatrixBlock> localblock | 
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| 381 | = block_to_block(block->blocki,block->blockj); | 
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| 382 | if (localblock.nonnull()) { | 
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| 383 | int n = rowblocks()->size(block->blocki); | 
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| 384 | double *dat1 = block->dat(); | 
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| 385 | double *dat2 = localblock->dat(); | 
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| 386 | for (int i=0; i<n; i++) { | 
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| 387 | dat2[i*n+i] += *dat1++; | 
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| 388 | } | 
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| 389 | } | 
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| 390 | } | 
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| 391 | } | 
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| 392 |  | 
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| 393 | void | 
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| 394 | DistSCMatrix::accumulate(const SCVector*a) | 
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| 395 | { | 
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| 396 | // make sure that the argument is of the correct type | 
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| 397 | const DistSCVector* la | 
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| 398 | = require_dynamic_cast<const DistSCVector*>(a,"DistSCMatrix::accumulate"); | 
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| 399 |  | 
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| 400 | // make sure that the dimensions match | 
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| 401 | if (!((rowdim()->equiv(la->dim()) && coldim()->n() == 1) | 
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| 402 | || (coldim()->equiv(la->dim()) && rowdim()->n() == 1))) { | 
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| 403 | ExEnv::errn() << indent << "DistSCMatrix::accumulate(SCVector*a): " | 
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| 404 | << "dimensions don't match\n"; | 
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| 405 | abort(); | 
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| 406 | } | 
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| 407 |  | 
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| 408 | SCMatrixBlockListIter I, J; | 
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| 409 | for (I = blocklist->begin(), J = la->blocklist->begin(); | 
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| 410 | I != blocklist->end() && J != la->blocklist->end(); | 
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| 411 | I++,J++) { | 
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| 412 | int n = I.block()->ndat(); | 
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| 413 | if (n != J.block()->ndat()) { | 
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| 414 | ExEnv::errn() << indent << "DistSCMatrix::accumulate(SCVector*a): " | 
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| 415 | << "block lists do not match" << endl; | 
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| 416 | abort(); | 
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| 417 | } | 
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| 418 | double *dati = I.block()->dat(); | 
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| 419 | double *datj = J.block()->dat(); | 
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| 420 | for (int i=0; i<n; i++) dati[i] += datj[i]; | 
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| 421 | } | 
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| 422 | } | 
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| 423 |  | 
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| 424 | void | 
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| 425 | DistSCMatrix::accumulate_product_rr(SCMatrix*pa,SCMatrix*pb) | 
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| 426 | { | 
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| 427 | const char* name = "DistSCMatrix::accumulate_product_rr"; | 
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| 428 | // make sure that the arguments are of the correct type | 
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| 429 | DistSCMatrix* a = require_dynamic_cast<DistSCMatrix*>(pa,name); | 
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| 430 | DistSCMatrix* b = require_dynamic_cast<DistSCMatrix*>(pb,name); | 
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| 431 |  | 
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| 432 | // make sure that the dimensions match | 
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| 433 | if (!rowdim()->equiv(a->rowdim()) || !coldim()->equiv(b->coldim()) || | 
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| 434 | !a->coldim()->equiv(b->rowdim())) { | 
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| 435 | ExEnv::errn() << indent | 
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| 436 | << "DistSCMatrix::accumulate_product_rr(SCMatrix*a,SCMatrix*b): " | 
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| 437 | << "dimensions don't match\n"; | 
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| 438 | ExEnv::err0() << indent << "rowdim():" << endl; | 
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| 439 | rowdim().print(); | 
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| 440 | ExEnv::err0() << indent << "coldim():" << endl; | 
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| 441 | coldim().print(); | 
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| 442 | ExEnv::err0() << indent << "a->rowdim():" << endl; | 
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| 443 | a->rowdim().print(); | 
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| 444 | ExEnv::err0() << indent << "a->coldim():" << endl; | 
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| 445 | a->coldim().print(); | 
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| 446 | ExEnv::err0() << indent << "b->rowdim():" << endl; | 
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| 447 | b->rowdim().print(); | 
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| 448 | ExEnv::err0() << indent << "b->coldim():" << endl; | 
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| 449 | b->coldim().print(); | 
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| 450 | abort(); | 
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| 451 | } | 
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| 452 |  | 
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| 453 | // i need this in row form and a in row form | 
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| 454 | create_vecform(Row); | 
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| 455 | vecform_zero(); | 
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| 456 | a->create_vecform(Row); | 
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| 457 | a->vecform_op(CopyToVec); | 
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| 458 |  | 
|---|
| 459 | Ref<SCMatrixSubblockIter> I = b->all_blocks(SCMatrixSubblockIter::Read); | 
|---|
| 460 | for (I->begin(); I->ready(); I->next()) { | 
|---|
| 461 | Ref<SCMatrixRectBlock> blk | 
|---|
| 462 | = dynamic_cast<SCMatrixRectBlock*>(I->block()); | 
|---|
| 463 | int kk,k,jj,j,i,nj; | 
|---|
| 464 | nj = blk->jend - blk->jstart; | 
|---|
| 465 | double *data = blk->data; | 
|---|
| 466 | for (i=0; i<nvec; i++) { | 
|---|
| 467 | double *veci = vec[i]; | 
|---|
| 468 | double *aveci = a->vec[i]; | 
|---|
| 469 | for (j=blk->jstart,jj=0; j<blk->jend; j++,jj++) { | 
|---|
| 470 | double tmp = 0.0; | 
|---|
| 471 | for (k=blk->istart,kk=0; k<blk->iend; k++,kk++) { | 
|---|
| 472 | tmp += aveci[k] * data[kk*nj+jj]; | 
|---|
| 473 | } | 
|---|
| 474 | veci[j] += tmp; | 
|---|
| 475 | } | 
|---|
| 476 | } | 
|---|
| 477 | } | 
|---|
| 478 |  | 
|---|
| 479 | vecform_op(AccumFromVec); | 
|---|
| 480 | delete_vecform(); | 
|---|
| 481 | a->delete_vecform(); | 
|---|
| 482 | } | 
|---|
| 483 |  | 
|---|
| 484 | void | 
|---|
| 485 | DistSCMatrix::create_vecform(Form f, int nvectors) | 
|---|
| 486 | { | 
|---|
| 487 | // determine with rows/cols go on this node | 
|---|
| 488 | form = f; | 
|---|
| 489 | int nproc = messagegrp()->n(); | 
|---|
| 490 | int me = messagegrp()->me(); | 
|---|
| 491 | int n1=0, n2=0; | 
|---|
| 492 | if (form == Row) { n1 = nrow(); n2 = ncol(); } | 
|---|
| 493 | if (form == Col) { n1 = ncol(); n2 = nrow(); } | 
|---|
| 494 | if (nvectors == -1) { | 
|---|
| 495 | nvec = n1/nproc; | 
|---|
| 496 | vecoff = nvec*me; | 
|---|
| 497 | int nremain = n1%nproc; | 
|---|
| 498 | if (me < nremain) { | 
|---|
| 499 | vecoff += me; | 
|---|
| 500 | nvec++; | 
|---|
| 501 | } | 
|---|
| 502 | else { | 
|---|
| 503 | vecoff += nremain; | 
|---|
| 504 | } | 
|---|
| 505 | } | 
|---|
| 506 | else { | 
|---|
| 507 | nvec = nvectors; | 
|---|
| 508 | vecoff = 0; | 
|---|
| 509 | } | 
|---|
| 510 |  | 
|---|
| 511 | // allocate storage | 
|---|
| 512 | vec = new double*[nvec]; | 
|---|
| 513 | vec[0] = new double[nvec*n2]; | 
|---|
| 514 | int i; | 
|---|
| 515 | for (i=1; i<nvec; i++) { | 
|---|
| 516 | vec[i] = &vec[0][i*n2]; | 
|---|
| 517 | } | 
|---|
| 518 | } | 
|---|
| 519 |  | 
|---|
| 520 | void | 
|---|
| 521 | DistSCMatrix::vecform_zero() | 
|---|
| 522 | { | 
|---|
| 523 | int n=0; | 
|---|
| 524 | if (form == Row) { n = nvec * ncol(); } | 
|---|
| 525 | if (form == Col) { n = nvec * nrow(); } | 
|---|
| 526 |  | 
|---|
| 527 | double *dat = vec[0]; | 
|---|
| 528 | for (int i=0; i<n; i++) dat[i] = 0.0; | 
|---|
| 529 | } | 
|---|
| 530 |  | 
|---|
| 531 | void | 
|---|
| 532 | DistSCMatrix::delete_vecform() | 
|---|
| 533 | { | 
|---|
| 534 | delete[] vec[0]; | 
|---|
| 535 | delete[] vec; | 
|---|
| 536 | vec = 0; | 
|---|
| 537 | nvec = 0; | 
|---|
| 538 | } | 
|---|
| 539 |  | 
|---|
| 540 | void | 
|---|
| 541 | DistSCMatrix::vecform_op(VecOp op, int *ivec) | 
|---|
| 542 | { | 
|---|
| 543 | Ref<SCMatrixSubblockIter> i; | 
|---|
| 544 | if (op == CopyToVec || op == AccumToVec) { | 
|---|
| 545 | i = all_blocks(SCMatrixSubblockIter::Read); | 
|---|
| 546 | } | 
|---|
| 547 | else { | 
|---|
| 548 | if (op == CopyFromVec) assign(0.0); | 
|---|
| 549 | i = all_blocks(SCMatrixSubblockIter::Accum); | 
|---|
| 550 | } | 
|---|
| 551 | for (i->begin(); i->ready(); i->next()) { | 
|---|
| 552 | Ref<SCMatrixRectBlock> b = dynamic_cast<SCMatrixRectBlock*>(i->block()); | 
|---|
| 553 | if (DEBUG) | 
|---|
| 554 | ExEnv::outn() << messagegrp()->me() << ": " | 
|---|
| 555 | << "got block " << b->blocki << ' ' << b->blockj << endl; | 
|---|
| 556 | int b1start, b2start, b1end, b2end; | 
|---|
| 557 | if (form == Row) { | 
|---|
| 558 | b1start = b->istart; | 
|---|
| 559 | b2start = b->jstart; | 
|---|
| 560 | b1end = b->iend; | 
|---|
| 561 | b2end = b->jend; | 
|---|
| 562 | } | 
|---|
| 563 | else { | 
|---|
| 564 | b1start = b->jstart; | 
|---|
| 565 | b2start = b->istart; | 
|---|
| 566 | b1end = b->jend; | 
|---|
| 567 | b2end = b->iend; | 
|---|
| 568 | } | 
|---|
| 569 | int nbj = b->jend - b->jstart; | 
|---|
| 570 | int start, end; | 
|---|
| 571 | if (ivec) { | 
|---|
| 572 | start = b1start; | 
|---|
| 573 | end = b1end; | 
|---|
| 574 | } | 
|---|
| 575 | else { | 
|---|
| 576 | start = b1start > vecoff ? b1start : vecoff; | 
|---|
| 577 | end = b1end > vecoff+nvec ? vecoff+nvec : b1end; | 
|---|
| 578 | } | 
|---|
| 579 | double *dat = b->data; | 
|---|
| 580 | int off = -b1start; | 
|---|
| 581 | for (int j=start; j<end; j++) { | 
|---|
| 582 | double *vecj; | 
|---|
| 583 | if (ivec) { | 
|---|
| 584 | vecj = 0; | 
|---|
| 585 | for (int ii=0; ii<nvec; ii++) { | 
|---|
| 586 | if (ivec[ii] == j) { vecj = vec[ii]; break; } | 
|---|
| 587 | } | 
|---|
| 588 | if (!vecj) continue; | 
|---|
| 589 | if (DEBUG) | 
|---|
| 590 | ExEnv::outn() << messagegrp()->me() << ": getting [" | 
|---|
| 591 | << j << "," | 
|---|
| 592 | << b2start << "-" << b2end << ")" << endl; | 
|---|
| 593 | } | 
|---|
| 594 | else { | 
|---|
| 595 | vecj = vec[j-vecoff]; | 
|---|
| 596 | } | 
|---|
| 597 | for (int k=b2start; k<b2end; k++) { | 
|---|
| 598 | int blockoffset; | 
|---|
| 599 | if (DEBUG) | 
|---|
| 600 | ExEnv::outn() << messagegrp()->me() << ": " | 
|---|
| 601 | << "using vec[" << j-vecoff << "]" | 
|---|
| 602 | << "[" << k << "]" << endl; | 
|---|
| 603 | if (form == Row) { | 
|---|
| 604 | blockoffset = (j+off)*nbj+k - b2start; | 
|---|
| 605 | if (DEBUG) | 
|---|
| 606 | ExEnv::outn() << messagegrp()->me() << ": " | 
|---|
| 607 | << "Row datum offset is " | 
|---|
| 608 | << "(" << j << "+" << off << ")*" << nbj << "+" << k | 
|---|
| 609 | << "-" << b2start | 
|---|
| 610 | << " = " << blockoffset << "(" << b->ndat() << ") " | 
|---|
| 611 | << " -> " << dat[blockoffset] << endl; | 
|---|
| 612 | } | 
|---|
| 613 | else { | 
|---|
| 614 | blockoffset = (k-b2start)*nbj+j+off; | 
|---|
| 615 | } | 
|---|
| 616 | if (blockoffset >= b->ndat()) { | 
|---|
| 617 | fail("bad offset"); | 
|---|
| 618 | } | 
|---|
| 619 | double *datum = &dat[blockoffset]; | 
|---|
| 620 | if (op == CopyToVec) { | 
|---|
| 621 | if (DEBUG) | 
|---|
| 622 | ExEnv::outn() << messagegrp()->me() << ": " | 
|---|
| 623 | << "copying " << *datum << " " | 
|---|
| 624 | << "to " << j << " " << k << endl; | 
|---|
| 625 | vecj[k] = *datum; | 
|---|
| 626 | } | 
|---|
| 627 | else if (op == CopyFromVec) { | 
|---|
| 628 | *datum = vecj[k]; | 
|---|
| 629 | } | 
|---|
| 630 | else if (op == AccumToVec) { | 
|---|
| 631 | vecj[k] += *datum; | 
|---|
| 632 | } | 
|---|
| 633 | else if (op == AccumFromVec) { | 
|---|
| 634 | *datum += vecj[k]; | 
|---|
| 635 | } | 
|---|
| 636 | } | 
|---|
| 637 | } | 
|---|
| 638 | } | 
|---|
| 639 | } | 
|---|
| 640 |  | 
|---|
| 641 | // does the outer product a x b.  this must have rowdim() == a->dim() and | 
|---|
| 642 | // coldim() == b->dim() | 
|---|
| 643 | void | 
|---|
| 644 | DistSCMatrix::accumulate_outer_product(SCVector*a,SCVector*b) | 
|---|
| 645 | { | 
|---|
| 646 | const char* name = "DistSCMatrix::accumulate_outer_product"; | 
|---|
| 647 | // make sure that the arguments are of the correct type | 
|---|
| 648 | DistSCVector* la = require_dynamic_cast<DistSCVector*>(a,name); | 
|---|
| 649 | DistSCVector* lb = require_dynamic_cast<DistSCVector*>(b,name); | 
|---|
| 650 |  | 
|---|
| 651 | // make sure that the dimensions match | 
|---|
| 652 | if (!rowdim()->equiv(la->dim()) || !coldim()->equiv(lb->dim())) { | 
|---|
| 653 | ExEnv::errn() << indent | 
|---|
| 654 | << "DistSCMatrix::accumulate_outer_product(SCVector*a,SCVector*b): " | 
|---|
| 655 | << "dimensions don't match\n"; | 
|---|
| 656 | abort(); | 
|---|
| 657 | } | 
|---|
| 658 |  | 
|---|
| 659 | Ref<SCMatrixSubblockIter> I = a->all_blocks(SCMatrixSubblockIter::Read); | 
|---|
| 660 | Ref<SCMatrixSubblockIter> J = b->all_blocks(SCMatrixSubblockIter::Read); | 
|---|
| 661 | for (I->begin(); I->ready(); I->next()) { | 
|---|
| 662 | Ref<SCVectorSimpleBlock> vi | 
|---|
| 663 | = dynamic_cast<SCVectorSimpleBlock*>(I->block()); | 
|---|
| 664 | int ni = vi->iend - vi->istart; | 
|---|
| 665 | for (J->begin(); J->ready(); J->next()) { | 
|---|
| 666 | Ref<SCVectorSimpleBlock> vj | 
|---|
| 667 | = dynamic_cast<SCVectorSimpleBlock*>(J->block()); | 
|---|
| 668 | Ref<SCMatrixRectBlock> rij | 
|---|
| 669 | = dynamic_cast<SCMatrixRectBlock*>(block_to_block(vi->blocki, | 
|---|
| 670 | vj->blocki).pointer()); | 
|---|
| 671 | // if the block is held locally sum in the outer prod contrib | 
|---|
| 672 | if (rij.nonnull()) { | 
|---|
| 673 | int nj = vj->iend - vj->istart; | 
|---|
| 674 | double *dat = rij->data; | 
|---|
| 675 | for (int i=0; i<ni; i++) { | 
|---|
| 676 | for (int j=0; j<nj; j++) { | 
|---|
| 677 | *dat += vi->data[i]*vj->data[j]; | 
|---|
| 678 | } | 
|---|
| 679 | } | 
|---|
| 680 | } | 
|---|
| 681 | } | 
|---|
| 682 | } | 
|---|
| 683 | } | 
|---|
| 684 |  | 
|---|
| 685 | void | 
|---|
| 686 | DistSCMatrix::transpose_this() | 
|---|
| 687 | { | 
|---|
| 688 | RefSCDimension tmp = d1; | 
|---|
| 689 | d1 = d2; | 
|---|
| 690 | d2 = tmp; | 
|---|
| 691 |  | 
|---|
| 692 | Ref<SCMatrixBlockList> oldlist = blocklist; | 
|---|
| 693 | init_blocklist(); | 
|---|
| 694 |  | 
|---|
| 695 | assign(0.0); | 
|---|
| 696 |  | 
|---|
| 697 | Ref<SCMatrixSubblockIter> I | 
|---|
| 698 | = new DistSCMatrixListSubblockIter(SCMatrixSubblockIter::Read, | 
|---|
| 699 | oldlist, | 
|---|
| 700 | messagegrp()); | 
|---|
| 701 | for (I->begin(); I->ready(); I->next()) { | 
|---|
| 702 | Ref<SCMatrixRectBlock> remote | 
|---|
| 703 | = dynamic_cast<SCMatrixRectBlock*>(I->block()); | 
|---|
| 704 | Ref<SCMatrixRectBlock> local | 
|---|
| 705 | = dynamic_cast<SCMatrixRectBlock*>(block_to_block(remote->blockj, | 
|---|
| 706 | remote->blocki).pointer()); | 
|---|
| 707 | if (local.nonnull()) { | 
|---|
| 708 | int ni = local->iend - local->istart; | 
|---|
| 709 | int nj = local->jend - local->jstart; | 
|---|
| 710 | for (int i=0; i<ni; i++) { | 
|---|
| 711 | for (int j=0; j<nj; j++) { | 
|---|
| 712 | local->data[i*nj+j] = remote->data[j*ni+i]; | 
|---|
| 713 | } | 
|---|
| 714 | } | 
|---|
| 715 | } | 
|---|
| 716 | } | 
|---|
| 717 |  | 
|---|
| 718 | } | 
|---|
| 719 |  | 
|---|
| 720 | double | 
|---|
| 721 | DistSCMatrix::invert_this() | 
|---|
| 722 | { | 
|---|
| 723 | if (nrow() != ncol()) { | 
|---|
| 724 | ExEnv::errn() << indent << "DistSCMatrix::invert_this: matrix is not square\n"; | 
|---|
| 725 | abort(); | 
|---|
| 726 | } | 
|---|
| 727 | RefSymmSCMatrix refs = kit()->symmmatrix(d1); | 
|---|
| 728 | refs->assign(0.0); | 
|---|
| 729 | refs->accumulate_symmetric_product(this); | 
|---|
| 730 | double determ2 = refs->invert_this(); | 
|---|
| 731 | transpose_this(); | 
|---|
| 732 | RefSCMatrix reft = copy(); | 
|---|
| 733 | assign(0.0); | 
|---|
| 734 | ((SCMatrix*)this)->accumulate_product(reft.pointer(), refs.pointer()); | 
|---|
| 735 | return sqrt(fabs(determ2)); | 
|---|
| 736 | } | 
|---|
| 737 |  | 
|---|
| 738 | void | 
|---|
| 739 | DistSCMatrix::gen_invert_this() | 
|---|
| 740 | { | 
|---|
| 741 | invert_this(); | 
|---|
| 742 | } | 
|---|
| 743 |  | 
|---|
| 744 | double | 
|---|
| 745 | DistSCMatrix::determ_this() | 
|---|
| 746 | { | 
|---|
| 747 | if (nrow() != ncol()) { | 
|---|
| 748 | ExEnv::errn() << indent << "DistSCMatrix::determ_this: matrix is not square\n"; | 
|---|
| 749 | abort(); | 
|---|
| 750 | } | 
|---|
| 751 | return invert_this(); | 
|---|
| 752 | } | 
|---|
| 753 |  | 
|---|
| 754 | double | 
|---|
| 755 | DistSCMatrix::trace() | 
|---|
| 756 | { | 
|---|
| 757 | if (nrow() != ncol()) { | 
|---|
| 758 | ExEnv::errn() << indent << "DistSCMatrix::trace: matrix is not square\n"; | 
|---|
| 759 | abort(); | 
|---|
| 760 | } | 
|---|
| 761 |  | 
|---|
| 762 | double ret=0.0; | 
|---|
| 763 | Ref<SCMatrixSubblockIter> I = local_blocks(SCMatrixSubblockIter::Read); | 
|---|
| 764 | for (I->begin(); I->ready(); I->next()) { | 
|---|
| 765 | Ref<SCMatrixRectBlock> b = dynamic_cast<SCMatrixRectBlock*>(I->block()); | 
|---|
| 766 | if (b->blocki == b->blockj) { | 
|---|
| 767 | int ni = b->iend-b->istart; | 
|---|
| 768 | for (int i=0; i<ni; i++) { | 
|---|
| 769 | ret += b->data[i*ni+i]; | 
|---|
| 770 | } | 
|---|
| 771 | } | 
|---|
| 772 | } | 
|---|
| 773 | messagegrp()->sum(ret); | 
|---|
| 774 |  | 
|---|
| 775 | return ret; | 
|---|
| 776 | } | 
|---|
| 777 |  | 
|---|
| 778 | double | 
|---|
| 779 | DistSCMatrix::solve_this(SCVector*v) | 
|---|
| 780 | { | 
|---|
| 781 | error("no solve_this"); | 
|---|
| 782 |  | 
|---|
| 783 | // make sure that the dimensions match | 
|---|
| 784 | if (!rowdim()->equiv(v->dim())) { | 
|---|
| 785 | ExEnv::errn() << indent << "DistSCMatrix::solve_this(SCVector*v): " | 
|---|
| 786 | << "dimensions don't match\n"; | 
|---|
| 787 | abort(); | 
|---|
| 788 | } | 
|---|
| 789 |  | 
|---|
| 790 | return 0.0; | 
|---|
| 791 | } | 
|---|
| 792 |  | 
|---|
| 793 | void | 
|---|
| 794 | DistSCMatrix::schmidt_orthog(SymmSCMatrix *S, int nc) | 
|---|
| 795 | { | 
|---|
| 796 | error("no schmidt_orthog"); | 
|---|
| 797 | } | 
|---|
| 798 |  | 
|---|
| 799 | int | 
|---|
| 800 | DistSCMatrix::schmidt_orthog_tol(SymmSCMatrix *S, double tol, double *res) | 
|---|
| 801 | { | 
|---|
| 802 | error("no schmidt_orthog_tol"); | 
|---|
| 803 | return 0; | 
|---|
| 804 | } | 
|---|
| 805 |  | 
|---|
| 806 | void | 
|---|
| 807 | DistSCMatrix::element_op(const Ref<SCElementOp>& op) | 
|---|
| 808 | { | 
|---|
| 809 | SCMatrixBlockListIter i; | 
|---|
| 810 | for (i = blocklist->begin(); i != blocklist->end(); i++) { | 
|---|
| 811 | //       ExEnv::outn() << "rect elemop processing a block of type " | 
|---|
| 812 | //            << i.block()->class_name() << endl; | 
|---|
| 813 | op->process_base(i.block()); | 
|---|
| 814 | } | 
|---|
| 815 | if (op->has_collect()) op->collect(messagegrp()); | 
|---|
| 816 | } | 
|---|
| 817 |  | 
|---|
| 818 | void | 
|---|
| 819 | DistSCMatrix::element_op(const Ref<SCElementOp2>& op, | 
|---|
| 820 | SCMatrix* m) | 
|---|
| 821 | { | 
|---|
| 822 | DistSCMatrix *lm | 
|---|
| 823 | = require_dynamic_cast<DistSCMatrix*>(m,"DistSCMatrix::element_op"); | 
|---|
| 824 |  | 
|---|
| 825 | if (!rowdim()->equiv(lm->rowdim()) || !coldim()->equiv(lm->coldim())) { | 
|---|
| 826 | ExEnv::errn() << indent << "DistSCMatrix: bad element_op\n"; | 
|---|
| 827 | abort(); | 
|---|
| 828 | } | 
|---|
| 829 | SCMatrixBlockListIter i, j; | 
|---|
| 830 | for (i = blocklist->begin(), j = lm->blocklist->begin(); | 
|---|
| 831 | i != blocklist->end(); | 
|---|
| 832 | i++, j++) { | 
|---|
| 833 | op->process_base(i.block(), j.block()); | 
|---|
| 834 | } | 
|---|
| 835 | if (op->has_collect()) op->collect(messagegrp()); | 
|---|
| 836 | } | 
|---|
| 837 |  | 
|---|
| 838 | void | 
|---|
| 839 | DistSCMatrix::element_op(const Ref<SCElementOp3>& op, | 
|---|
| 840 | SCMatrix* m,SCMatrix* n) | 
|---|
| 841 | { | 
|---|
| 842 | DistSCMatrix *lm | 
|---|
| 843 | = require_dynamic_cast<DistSCMatrix*>(m,"DistSCMatrix::element_op"); | 
|---|
| 844 | DistSCMatrix *ln | 
|---|
| 845 | = require_dynamic_cast<DistSCMatrix*>(n,"DistSCMatrix::element_op"); | 
|---|
| 846 |  | 
|---|
| 847 | if (!rowdim()->equiv(lm->rowdim()) || !coldim()->equiv(lm->coldim()) || | 
|---|
| 848 | !rowdim()->equiv(ln->rowdim()) || !coldim()->equiv(ln->coldim())) { | 
|---|
| 849 | ExEnv::errn() << indent << "DistSCMatrix: bad element_op\n"; | 
|---|
| 850 | abort(); | 
|---|
| 851 | } | 
|---|
| 852 | SCMatrixBlockListIter i, j, k; | 
|---|
| 853 | for (i = blocklist->begin(), | 
|---|
| 854 | j = lm->blocklist->begin(), | 
|---|
| 855 | k = ln->blocklist->begin(); | 
|---|
| 856 | i != blocklist->end(); | 
|---|
| 857 | i++, j++, k++) { | 
|---|
| 858 | op->process_base(i.block(), j.block(), k.block()); | 
|---|
| 859 | } | 
|---|
| 860 | if (op->has_collect()) op->collect(messagegrp()); | 
|---|
| 861 | } | 
|---|
| 862 |  | 
|---|
| 863 | void | 
|---|
| 864 | DistSCMatrix::vprint(const char *title, ostream& os, int prec) const | 
|---|
| 865 | { | 
|---|
| 866 | // cast so the non const vprint member can be called | 
|---|
| 867 | ((DistSCMatrix*)this)->vprint(title,os,prec); | 
|---|
| 868 | } | 
|---|
| 869 |  | 
|---|
| 870 | void | 
|---|
| 871 | DistSCMatrix::vprint(const char *title, ostream& os, int prec) | 
|---|
| 872 | { | 
|---|
| 873 | int i,j; | 
|---|
| 874 | int lwidth; | 
|---|
| 875 | double max=this->maxabs(); | 
|---|
| 876 |  | 
|---|
| 877 | int me = messagegrp()->me(); | 
|---|
| 878 |  | 
|---|
| 879 | max = (max==0.0) ? 1.0 : log10(max); | 
|---|
| 880 | if (max < 0.0) max=1.0; | 
|---|
| 881 |  | 
|---|
| 882 | lwidth = prec+5+(int) max; | 
|---|
| 883 |  | 
|---|
| 884 | os.setf(ios::fixed,ios::floatfield); os.precision(prec); | 
|---|
| 885 | os.setf(ios::right,ios::adjustfield); | 
|---|
| 886 |  | 
|---|
| 887 | if (messagegrp()->me() == 0) { | 
|---|
| 888 | if (title) os << endl << indent << title << endl; | 
|---|
| 889 | else os << endl; | 
|---|
| 890 | } | 
|---|
| 891 |  | 
|---|
| 892 | if (nrow()==0 || ncol()==0) { | 
|---|
| 893 | if (me == 0) os << indent << "empty matrix\n"; | 
|---|
| 894 | return; | 
|---|
| 895 | } | 
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| 896 |  | 
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| 897 | create_vecform(Row); | 
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| 898 | vecform_op(CopyToVec); | 
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| 899 |  | 
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| 900 | int nc = ncol(); | 
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| 901 |  | 
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| 902 | int tmp = 0; | 
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| 903 | if (me != 0) { | 
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| 904 | messagegrp()->recv(me-1, tmp); | 
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| 905 | } | 
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| 906 | else { | 
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| 907 | os << indent; | 
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| 908 | for (i=0; i<nc; i++) os << setw(lwidth) << i; | 
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| 909 | os << endl; | 
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| 910 | } | 
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| 911 | for (i=0; i<nvec; i++) { | 
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| 912 | os << indent << setw(5) << i+vecoff; | 
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| 913 | for (j=0; j<nc; j++) os << setw(lwidth) << vec[i][j]; | 
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| 914 | os << endl; | 
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| 915 | } | 
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| 916 | if (messagegrp()->n() > 1) { | 
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| 917 | // send the go ahead to the next node | 
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| 918 | int dest = me+1; | 
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| 919 | if (dest == messagegrp()->n()) dest = 0; | 
|---|
| 920 | messagegrp()->send(dest, tmp); | 
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| 921 | // make node zero wait on the last node | 
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| 922 | if (me == 0) messagegrp()->recv(messagegrp()->n()-1, tmp); | 
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| 923 | } | 
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| 924 |  | 
|---|
| 925 | delete_vecform(); | 
|---|
| 926 | } | 
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| 927 |  | 
|---|
| 928 | Ref<SCMatrixSubblockIter> | 
|---|
| 929 | DistSCMatrix::local_blocks(SCMatrixSubblockIter::Access access) | 
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| 930 | { | 
|---|
| 931 | return new SCMatrixListSubblockIter(access, blocklist); | 
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| 932 | } | 
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| 933 |  | 
|---|
| 934 | Ref<SCMatrixSubblockIter> | 
|---|
| 935 | DistSCMatrix::all_blocks(SCMatrixSubblockIter::Access access) | 
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| 936 | { | 
|---|
| 937 | return new DistSCMatrixListSubblockIter(access, blocklist, messagegrp()); | 
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| 938 | } | 
|---|
| 939 |  | 
|---|
| 940 | void | 
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| 941 | DistSCMatrix::error(const char *msg) | 
|---|
| 942 | { | 
|---|
| 943 | ExEnv::errn() << "DistSCMatrix: error: " << msg << endl; | 
|---|
| 944 | } | 
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| 945 |  | 
|---|
| 946 | Ref<DistSCMatrixKit> | 
|---|
| 947 | DistSCMatrix::skit() | 
|---|
| 948 | { | 
|---|
| 949 | return dynamic_cast<DistSCMatrixKit*>(kit().pointer()); | 
|---|
| 950 | } | 
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| 951 |  | 
|---|
| 952 | ///////////////////////////////////////////////////////////////////////////// | 
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| 953 |  | 
|---|
| 954 | // Local Variables: | 
|---|
| 955 | // mode: c++ | 
|---|
| 956 | // c-file-style: "CLJ" | 
|---|
| 957 | // End: | 
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