[0b990d] | 1 | //
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| 2 | // distrect.cc
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| 3 | //
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| 4 | // Copyright (C) 1996 Limit Point Systems, Inc.
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| 5 | //
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| 6 | // Author: Curtis Janssen <cljanss@limitpt.com>
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| 7 | // Maintainer: LPS
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| 8 | //
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| 9 | // This file is part of the SC Toolkit.
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| 10 | //
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| 11 | // The SC Toolkit is free software; you can redistribute it and/or modify
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| 12 | // it under the terms of the GNU Library General Public License as published by
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| 13 | // the Free Software Foundation; either version 2, or (at your option)
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| 14 | // any later version.
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| 15 | //
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| 16 | // The SC Toolkit is distributed in the hope that it will be useful,
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| 17 | // but WITHOUT ANY WARRANTY; without even the implied warranty of
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| 18 | // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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| 19 | // GNU Library General Public License for more details.
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| 20 | //
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| 21 | // You should have received a copy of the GNU Library General Public License
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| 22 | // along with the SC Toolkit; see the file COPYING.LIB. If not, write to
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| 23 | // the Free Software Foundation, 675 Mass Ave, Cambridge, MA 02139, USA.
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| 24 | //
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| 25 | // The U.S. Government is granted a limited license as per AL 91-7.
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| 26 | //
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| 27 |
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| 28 | #include <iostream>
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| 29 | #include <iomanip>
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| 30 | #include <stdlib.h>
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| 31 | #include <math.h>
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| 32 |
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| 33 | #include <util/misc/formio.h>
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| 34 | #include <util/keyval/keyval.h>
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| 35 | #include <math/scmat/dist.h>
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| 36 | #include <math/scmat/cmatrix.h>
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| 37 | #include <math/scmat/elemop.h>
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| 38 |
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| 39 | using namespace std;
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| 40 | using namespace sc;
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| 41 |
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| 42 | #define DEBUG 0
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| 43 |
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| 44 | /////////////////////////////////////////////////////////////////////////////
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| 45 |
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| 46 | static void
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| 47 | fail(const char *m)
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| 48 | {
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| 49 | ExEnv::errn() << indent << "distrect.cc: error: " << m << endl;
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| 50 | abort();
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| 51 | }
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| 52 |
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| 53 | /////////////////////////////////////////////////////////////////////////////
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| 54 | // DistSCMatrix member functions
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| 55 |
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| 56 | static ClassDesc DistSCMatrix_cd(
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| 57 | typeid(DistSCMatrix),"DistSCMatrix",1,"public SCMatrix",
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| 58 | 0, 0, 0);
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| 59 |
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| 60 | DistSCMatrix::DistSCMatrix(const RefSCDimension&a,const RefSCDimension&b,
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| 61 | DistSCMatrixKit*k):
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| 62 | SCMatrix(a,b,k)
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| 63 | {
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| 64 | init_blocklist();
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| 65 | }
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| 66 |
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| 67 | int
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| 68 | DistSCMatrix::block_to_node(int i, int j) const
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| 69 | {
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| 70 | return (i*d2->blocks()->nblock() + j)%messagegrp()->n();
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| 71 | }
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| 72 |
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| 73 | Ref<SCMatrixBlock>
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| 74 | DistSCMatrix::block_to_block(int i, int j) const
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| 75 | {
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| 76 | int offset = i*d2->blocks()->nblock() + j;
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| 77 | int nproc = messagegrp()->n();
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| 78 |
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| 79 | if ((offset%nproc) != messagegrp()->me()) return 0;
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| 80 |
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| 81 | SCMatrixBlockListIter I;
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| 82 | for (I=blocklist->begin(); I!=blocklist->end(); I++) {
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| 83 | if (I.block()->blocki == i && I.block()->blockj == j)
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| 84 | return I.block();
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| 85 | }
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| 86 |
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| 87 | ExEnv::errn() << indent << "DistSCMatrix::block_to_block: internal error" << endl;
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| 88 | abort();
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| 89 | return 0;
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| 90 | }
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| 91 |
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| 92 | double *
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| 93 | DistSCMatrix::find_element(int i, int j) const
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| 94 | {
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| 95 | int bi, oi;
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| 96 | d1->blocks()->elem_to_block(i, bi, oi);
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| 97 |
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| 98 | int bj, oj;
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| 99 | d2->blocks()->elem_to_block(j, bj, oj);
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| 100 |
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| 101 | Ref<SCMatrixRectBlock> blk
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| 102 | = dynamic_cast<SCMatrixRectBlock*>(block_to_block(bi, bj).pointer());
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| 103 | if (blk.nonnull()) {
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| 104 | return &blk->data[oi*(blk->jend-blk->jstart)+oj];
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| 105 | }
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| 106 | else {
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| 107 | return 0;
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| 108 | }
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| 109 | }
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| 110 |
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| 111 | int
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| 112 | DistSCMatrix::element_to_node(int i, int j) const
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| 113 | {
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| 114 | int bi, oi;
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| 115 | d1->blocks()->elem_to_block(i, bi, oi);
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| 116 |
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| 117 | int bj, oj;
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| 118 | d2->blocks()->elem_to_block(j, bj, oj);
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| 119 |
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| 120 | return block_to_node(bi,bj);
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| 121 | }
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| 122 |
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| 123 | void
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| 124 | DistSCMatrix::init_blocklist()
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| 125 | {
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| 126 | int i, j, index;
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| 127 | int me = messagegrp()->me();
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| 128 | blocklist = new SCMatrixBlockList;
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| 129 | for (i=0, index=0; i<d1->blocks()->nblock(); i++) {
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| 130 | for (j=0; j<d2->blocks()->nblock(); j++, index++) {
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| 131 | if (block_to_node(i,j) == me) {
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| 132 | Ref<SCMatrixBlock> b
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| 133 | = new SCMatrixRectBlock(d1->blocks()->start(i),
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| 134 | d1->blocks()->fence(i),
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| 135 | d2->blocks()->start(j),
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| 136 | d2->blocks()->fence(j));
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| 137 | b->blocki = i;
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| 138 | b->blockj = j;
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| 139 | blocklist->append(b);
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| 140 | }
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| 141 | }
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| 142 | }
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| 143 | }
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| 144 |
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| 145 | DistSCMatrix::~DistSCMatrix()
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| 146 | {
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| 147 | }
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| 148 |
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| 149 | double
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| 150 | DistSCMatrix::get_element(int i,int j) const
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| 151 | {
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| 152 | double res;
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| 153 | double *e = find_element(i,j);
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| 154 | if (e) {
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| 155 | res = *e;
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| 156 | messagegrp()->bcast(res, messagegrp()->me());
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| 157 | }
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| 158 | else {
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| 159 | messagegrp()->bcast(res, element_to_node(i, j));
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| 160 | }
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| 161 | return res;
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| 162 | }
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| 163 |
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| 164 | void
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| 165 | DistSCMatrix::set_element(int i,int j,double a)
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| 166 | {
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| 167 | double *e = find_element(i,j);
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| 168 | if (e) {
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| 169 | *e = a;
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| 170 | }
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| 171 | }
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| 172 |
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| 173 | void
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| 174 | DistSCMatrix::accumulate_element(int i,int j,double a)
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| 175 | {
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| 176 | double *e = find_element(i,j);
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| 177 | if (e) {
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| 178 | *e += a;
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| 179 | }
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| 180 | }
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| 181 |
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| 182 | SCMatrix *
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| 183 | DistSCMatrix::get_subblock(int br, int er, int bc, int ec)
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| 184 | {
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| 185 | error("get_subblock");
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| 186 | return 0;
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| 187 | }
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| 188 |
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| 189 | void
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| 190 | DistSCMatrix::assign_subblock(SCMatrix*sb, int br, int er, int bc, int ec,
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| 191 | int source_br, int source_bc)
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| 192 | {
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| 193 | error("assign_subblock");
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| 194 | }
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| 195 |
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| 196 | void
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| 197 | DistSCMatrix::accumulate_subblock(SCMatrix*sb, int br, int er, int bc, int ec,
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| 198 | int source_br, int source_bc)
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| 199 | {
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| 200 | error("accumulate_subblock");
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| 201 | }
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| 202 |
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| 203 | SCVector *
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| 204 | DistSCMatrix::get_row(int i)
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| 205 | {
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| 206 | error("get_row");
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| 207 | return 0;
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| 208 | }
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| 209 |
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| 210 | void
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| 211 | DistSCMatrix::assign_row(SCVector *v, int i)
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| 212 | {
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| 213 | error("assign_row");
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| 214 | }
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| 215 |
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| 216 | void
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| 217 | DistSCMatrix::accumulate_row(SCVector *v, int i)
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| 218 | {
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| 219 | error("accumulate_row");
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| 220 | }
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| 221 |
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| 222 | SCVector *
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| 223 | DistSCMatrix::get_column(int i)
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| 224 | {
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| 225 | double *col = new double[nrow()];
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| 226 |
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| 227 | Ref<SCMatrixSubblockIter> iter = local_blocks(SCMatrixSubblockIter::Read);
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| 228 | for (iter->begin(); iter->ready(); iter->next()) {
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| 229 | SCMatrixRectBlock *b = dynamic_cast<SCMatrixRectBlock*>(iter->block());
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| 230 | if (b->jstart > i || b->jend <= i)
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| 231 | continue;
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| 232 |
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| 233 | int joff = i-b->jstart;
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| 234 | int jlen = b->jend-b->jstart;
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| 235 | int ist = 0;
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| 236 |
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| 237 | for (int ii=b->istart; ii < b->iend; ii++,ist++)
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| 238 | col[ii] = b->data[ist*jlen+joff];
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| 239 | }
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| 240 |
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| 241 | SCVector * rcol = kit_->vector(rowdim());
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| 242 | rcol->assign(col);
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| 243 |
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| 244 | delete[] col;
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| 245 |
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| 246 | return rcol;
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| 247 | }
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| 248 |
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| 249 | void
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| 250 | DistSCMatrix::assign_column(SCVector *v, int i)
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| 251 | {
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| 252 | error("assign_column");
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| 253 | }
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| 254 |
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| 255 | void
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| 256 | DistSCMatrix::accumulate_column(SCVector *v, int i)
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| 257 | {
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| 258 | error("accumulate_column");
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| 259 | }
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| 260 |
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| 261 | void
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| 262 | DistSCMatrix::accumulate(const SCMatrix*a)
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| 263 | {
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| 264 | // make sure that the argument is of the correct type
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| 265 | const DistSCMatrix* la
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| 266 | = require_dynamic_cast<const DistSCMatrix*>(a,"DistSCMatrix::accumulate");
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| 267 |
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| 268 | // make sure that the dimensions match
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| 269 | if (!rowdim()->equiv(la->rowdim()) || !coldim()->equiv(la->coldim())) {
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| 270 | ExEnv::errn() << indent << "DistSCMatrix::accumulate(SCMatrix*a): "
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| 271 | << "dimensions don't match\n";
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| 272 | abort();
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| 273 | }
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| 274 |
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| 275 | SCMatrixBlockListIter i1, i2;
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| 276 | for (i1=la->blocklist->begin(),i2=blocklist->begin();
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| 277 | i1!=la->blocklist->end() && i2!=blocklist->end();
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| 278 | i1++,i2++) {
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| 279 | int n = i1.block()->ndat();
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| 280 | if (n != i2.block()->ndat()) {
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| 281 | ExEnv::errn() << indent
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| 282 | << "DistSCMatrixListSubblockIter::accumulate block mismatch: "
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| 283 | << "internal error" << endl;
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| 284 | abort();
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| 285 | }
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| 286 | double *dat1 = i1.block()->dat();
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| 287 | double *dat2 = i2.block()->dat();
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| 288 | for (int i=0; i<n; i++) {
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| 289 | dat2[i] += dat1[i];
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| 290 | }
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| 291 | }
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| 292 | }
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| 293 |
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| 294 | void
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| 295 | DistSCMatrix::accumulate(const SymmSCMatrix*a)
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| 296 | {
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| 297 | // make sure that the argument is of the correct type
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| 298 | const DistSymmSCMatrix* la
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| 299 | = require_dynamic_cast<const DistSymmSCMatrix*>(a,"DistSCMatrix::accumulate");
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| 300 |
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| 301 | // make sure that the dimensions match
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| 302 | if (!rowdim()->equiv(la->dim()) || !coldim()->equiv(la->dim())) {
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| 303 | ExEnv::errn() << indent << "DistSCMatrix::accumulate(SCMatrix*a): "
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| 304 | << "dimensions don't match\n";
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| 305 | abort();
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| 306 | }
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| 307 |
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| 308 | Ref<SCMatrixSubblockIter> I = ((SymmSCMatrix*)a)->all_blocks(SCMatrixSubblockIter::Read);
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| 309 | for (I->begin(); I->ready(); I->next()) {
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| 310 | Ref<SCMatrixBlock> block = I->block();
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| 311 | if (DEBUG)
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| 312 | ExEnv::outn() << messagegrp()->me() << ": "
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| 313 | << block->class_name()
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| 314 | << "(" << block->blocki << ", " << block->blockj << ")"
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| 315 | << endl;
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| 316 | // see if i've got this block
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| 317 | Ref<SCMatrixBlock> localblock
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| 318 | = block_to_block(block->blocki,block->blockj);
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| 319 | if (localblock.nonnull()) {
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| 320 | // the diagonal blocks require special handling
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| 321 | if (block->blocki == block->blockj) {
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| 322 | int n = rowblocks()->size(block->blocki);
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| 323 | double *dat1 = block->dat();
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| 324 | double *dat2 = localblock->dat();
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| 325 | for (int i=0; i<n; i++) {
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| 326 | for (int j=0; j<i; j++) {
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| 327 | double tmp = *dat1;
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| 328 | dat2[i*n+j] += tmp;
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| 329 | dat2[j*n+i] += tmp;
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| 330 | dat1++;
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| 331 | }
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| 332 | dat2[i*n+i] = *dat1++;
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| 333 | }
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| 334 | }
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| 335 | else {
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| 336 | int n = block->ndat();
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| 337 | double *dat1 = block->dat();
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| 338 | double *dat2 = localblock->dat();
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| 339 | for (int i=0; i<n; i++) {
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| 340 | dat2[i] += dat1[i];
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| 341 | }
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| 342 | }
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| 343 | }
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| 344 | // now for the transpose
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| 345 | if (block->blocki != block->blockj) {
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| 346 | localblock = block_to_block(block->blockj,block->blocki);
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| 347 | if (localblock.nonnull()) {
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| 348 | int nr = rowblocks()->size(block->blocki);
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| 349 | int nc = rowblocks()->size(block->blockj);
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| 350 | double *dat1 = block->dat();
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| 351 | double *dat2 = localblock->dat();
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| 352 | for (int i=0; i<nr; i++) {
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| 353 | for (int j=0; j<nc; j++) {
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| 354 | dat2[j*nr+i] += *dat1++;
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| 355 | }
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| 356 | }
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| 357 | }
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| 358 | }
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| 359 | }
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| 360 | }
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| 361 |
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| 362 | void
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| 363 | DistSCMatrix::accumulate(const DiagSCMatrix*a)
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| 364 | {
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| 365 | // make sure that the argument is of the correct type
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| 366 | const DistDiagSCMatrix* la
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| 367 | = require_dynamic_cast<const DistDiagSCMatrix*>(a,"DistSCMatrix::accumulate");
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| 368 |
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| 369 | // make sure that the dimensions match
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| 370 | if (!rowdim()->equiv(la->dim()) || !coldim()->equiv(la->dim())) {
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| 371 | ExEnv::errn() << indent << "DistSCMatrix::accumulate(SCMatrix*a): "
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| 372 | << "dimensions don't match\n";
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| 373 | abort();
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| 374 | }
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| 375 |
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| 376 | Ref<SCMatrixSubblockIter> I = ((DiagSCMatrix*)a)->all_blocks(SCMatrixSubblockIter::Read);
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| 377 | for (I->begin(); I->ready(); I->next()) {
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| 378 | Ref<SCMatrixBlock> block = I->block();
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| 379 | // see if i've got this block
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| 380 | Ref<SCMatrixBlock> localblock
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| 381 | = block_to_block(block->blocki,block->blockj);
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| 382 | if (localblock.nonnull()) {
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| 383 | int n = rowblocks()->size(block->blocki);
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| 384 | double *dat1 = block->dat();
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| 385 | double *dat2 = localblock->dat();
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| 386 | for (int i=0; i<n; i++) {
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| 387 | dat2[i*n+i] += *dat1++;
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| 388 | }
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| 389 | }
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| 390 | }
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| 391 | }
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| 392 |
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| 393 | void
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| 394 | DistSCMatrix::accumulate(const SCVector*a)
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| 395 | {
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| 396 | // make sure that the argument is of the correct type
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| 397 | const DistSCVector* la
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| 398 | = require_dynamic_cast<const DistSCVector*>(a,"DistSCMatrix::accumulate");
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| 399 |
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| 400 | // make sure that the dimensions match
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| 401 | if (!((rowdim()->equiv(la->dim()) && coldim()->n() == 1)
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| 402 | || (coldim()->equiv(la->dim()) && rowdim()->n() == 1))) {
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| 403 | ExEnv::errn() << indent << "DistSCMatrix::accumulate(SCVector*a): "
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| 404 | << "dimensions don't match\n";
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| 405 | abort();
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| 406 | }
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| 407 |
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| 408 | SCMatrixBlockListIter I, J;
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| 409 | for (I = blocklist->begin(), J = la->blocklist->begin();
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| 410 | I != blocklist->end() && J != la->blocklist->end();
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| 411 | I++,J++) {
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| 412 | int n = I.block()->ndat();
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| 413 | if (n != J.block()->ndat()) {
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| 414 | ExEnv::errn() << indent << "DistSCMatrix::accumulate(SCVector*a): "
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| 415 | << "block lists do not match" << endl;
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| 416 | abort();
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| 417 | }
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| 418 | double *dati = I.block()->dat();
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| 419 | double *datj = J.block()->dat();
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| 420 | for (int i=0; i<n; i++) dati[i] += datj[i];
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| 421 | }
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| 422 | }
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| 423 |
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| 424 | void
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| 425 | DistSCMatrix::accumulate_product_rr(SCMatrix*pa,SCMatrix*pb)
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| 426 | {
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| 427 | const char* name = "DistSCMatrix::accumulate_product_rr";
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| 428 | // make sure that the arguments are of the correct type
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| 429 | DistSCMatrix* a = require_dynamic_cast<DistSCMatrix*>(pa,name);
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| 430 | DistSCMatrix* b = require_dynamic_cast<DistSCMatrix*>(pb,name);
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| 431 |
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| 432 | // make sure that the dimensions match
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| 433 | if (!rowdim()->equiv(a->rowdim()) || !coldim()->equiv(b->coldim()) ||
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| 434 | !a->coldim()->equiv(b->rowdim())) {
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| 435 | ExEnv::errn() << indent
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| 436 | << "DistSCMatrix::accumulate_product_rr(SCMatrix*a,SCMatrix*b): "
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| 437 | << "dimensions don't match\n";
|
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| 438 | ExEnv::err0() << indent << "rowdim():" << endl;
|
---|
| 439 | rowdim().print();
|
---|
| 440 | ExEnv::err0() << indent << "coldim():" << endl;
|
---|
| 441 | coldim().print();
|
---|
| 442 | ExEnv::err0() << indent << "a->rowdim():" << endl;
|
---|
| 443 | a->rowdim().print();
|
---|
| 444 | ExEnv::err0() << indent << "a->coldim():" << endl;
|
---|
| 445 | a->coldim().print();
|
---|
| 446 | ExEnv::err0() << indent << "b->rowdim():" << endl;
|
---|
| 447 | b->rowdim().print();
|
---|
| 448 | ExEnv::err0() << indent << "b->coldim():" << endl;
|
---|
| 449 | b->coldim().print();
|
---|
| 450 | abort();
|
---|
| 451 | }
|
---|
| 452 |
|
---|
| 453 | // i need this in row form and a in row form
|
---|
| 454 | create_vecform(Row);
|
---|
| 455 | vecform_zero();
|
---|
| 456 | a->create_vecform(Row);
|
---|
| 457 | a->vecform_op(CopyToVec);
|
---|
| 458 |
|
---|
| 459 | Ref<SCMatrixSubblockIter> I = b->all_blocks(SCMatrixSubblockIter::Read);
|
---|
| 460 | for (I->begin(); I->ready(); I->next()) {
|
---|
| 461 | Ref<SCMatrixRectBlock> blk
|
---|
| 462 | = dynamic_cast<SCMatrixRectBlock*>(I->block());
|
---|
| 463 | int kk,k,jj,j,i,nj;
|
---|
| 464 | nj = blk->jend - blk->jstart;
|
---|
| 465 | double *data = blk->data;
|
---|
| 466 | for (i=0; i<nvec; i++) {
|
---|
| 467 | double *veci = vec[i];
|
---|
| 468 | double *aveci = a->vec[i];
|
---|
| 469 | for (j=blk->jstart,jj=0; j<blk->jend; j++,jj++) {
|
---|
| 470 | double tmp = 0.0;
|
---|
| 471 | for (k=blk->istart,kk=0; k<blk->iend; k++,kk++) {
|
---|
| 472 | tmp += aveci[k] * data[kk*nj+jj];
|
---|
| 473 | }
|
---|
| 474 | veci[j] += tmp;
|
---|
| 475 | }
|
---|
| 476 | }
|
---|
| 477 | }
|
---|
| 478 |
|
---|
| 479 | vecform_op(AccumFromVec);
|
---|
| 480 | delete_vecform();
|
---|
| 481 | a->delete_vecform();
|
---|
| 482 | }
|
---|
| 483 |
|
---|
| 484 | void
|
---|
| 485 | DistSCMatrix::create_vecform(Form f, int nvectors)
|
---|
| 486 | {
|
---|
| 487 | // determine with rows/cols go on this node
|
---|
| 488 | form = f;
|
---|
| 489 | int nproc = messagegrp()->n();
|
---|
| 490 | int me = messagegrp()->me();
|
---|
| 491 | int n1=0, n2=0;
|
---|
| 492 | if (form == Row) { n1 = nrow(); n2 = ncol(); }
|
---|
| 493 | if (form == Col) { n1 = ncol(); n2 = nrow(); }
|
---|
| 494 | if (nvectors == -1) {
|
---|
| 495 | nvec = n1/nproc;
|
---|
| 496 | vecoff = nvec*me;
|
---|
| 497 | int nremain = n1%nproc;
|
---|
| 498 | if (me < nremain) {
|
---|
| 499 | vecoff += me;
|
---|
| 500 | nvec++;
|
---|
| 501 | }
|
---|
| 502 | else {
|
---|
| 503 | vecoff += nremain;
|
---|
| 504 | }
|
---|
| 505 | }
|
---|
| 506 | else {
|
---|
| 507 | nvec = nvectors;
|
---|
| 508 | vecoff = 0;
|
---|
| 509 | }
|
---|
| 510 |
|
---|
| 511 | // allocate storage
|
---|
| 512 | vec = new double*[nvec];
|
---|
| 513 | vec[0] = new double[nvec*n2];
|
---|
| 514 | int i;
|
---|
| 515 | for (i=1; i<nvec; i++) {
|
---|
| 516 | vec[i] = &vec[0][i*n2];
|
---|
| 517 | }
|
---|
| 518 | }
|
---|
| 519 |
|
---|
| 520 | void
|
---|
| 521 | DistSCMatrix::vecform_zero()
|
---|
| 522 | {
|
---|
| 523 | int n=0;
|
---|
| 524 | if (form == Row) { n = nvec * ncol(); }
|
---|
| 525 | if (form == Col) { n = nvec * nrow(); }
|
---|
| 526 |
|
---|
| 527 | double *dat = vec[0];
|
---|
| 528 | for (int i=0; i<n; i++) dat[i] = 0.0;
|
---|
| 529 | }
|
---|
| 530 |
|
---|
| 531 | void
|
---|
| 532 | DistSCMatrix::delete_vecform()
|
---|
| 533 | {
|
---|
| 534 | delete[] vec[0];
|
---|
| 535 | delete[] vec;
|
---|
| 536 | vec = 0;
|
---|
| 537 | nvec = 0;
|
---|
| 538 | }
|
---|
| 539 |
|
---|
| 540 | void
|
---|
| 541 | DistSCMatrix::vecform_op(VecOp op, int *ivec)
|
---|
| 542 | {
|
---|
| 543 | Ref<SCMatrixSubblockIter> i;
|
---|
| 544 | if (op == CopyToVec || op == AccumToVec) {
|
---|
| 545 | i = all_blocks(SCMatrixSubblockIter::Read);
|
---|
| 546 | }
|
---|
| 547 | else {
|
---|
| 548 | if (op == CopyFromVec) assign(0.0);
|
---|
| 549 | i = all_blocks(SCMatrixSubblockIter::Accum);
|
---|
| 550 | }
|
---|
| 551 | for (i->begin(); i->ready(); i->next()) {
|
---|
| 552 | Ref<SCMatrixRectBlock> b = dynamic_cast<SCMatrixRectBlock*>(i->block());
|
---|
| 553 | if (DEBUG)
|
---|
| 554 | ExEnv::outn() << messagegrp()->me() << ": "
|
---|
| 555 | << "got block " << b->blocki << ' ' << b->blockj << endl;
|
---|
| 556 | int b1start, b2start, b1end, b2end;
|
---|
| 557 | if (form == Row) {
|
---|
| 558 | b1start = b->istart;
|
---|
| 559 | b2start = b->jstart;
|
---|
| 560 | b1end = b->iend;
|
---|
| 561 | b2end = b->jend;
|
---|
| 562 | }
|
---|
| 563 | else {
|
---|
| 564 | b1start = b->jstart;
|
---|
| 565 | b2start = b->istart;
|
---|
| 566 | b1end = b->jend;
|
---|
| 567 | b2end = b->iend;
|
---|
| 568 | }
|
---|
| 569 | int nbj = b->jend - b->jstart;
|
---|
| 570 | int start, end;
|
---|
| 571 | if (ivec) {
|
---|
| 572 | start = b1start;
|
---|
| 573 | end = b1end;
|
---|
| 574 | }
|
---|
| 575 | else {
|
---|
| 576 | start = b1start > vecoff ? b1start : vecoff;
|
---|
| 577 | end = b1end > vecoff+nvec ? vecoff+nvec : b1end;
|
---|
| 578 | }
|
---|
| 579 | double *dat = b->data;
|
---|
| 580 | int off = -b1start;
|
---|
| 581 | for (int j=start; j<end; j++) {
|
---|
| 582 | double *vecj;
|
---|
| 583 | if (ivec) {
|
---|
| 584 | vecj = 0;
|
---|
| 585 | for (int ii=0; ii<nvec; ii++) {
|
---|
| 586 | if (ivec[ii] == j) { vecj = vec[ii]; break; }
|
---|
| 587 | }
|
---|
| 588 | if (!vecj) continue;
|
---|
| 589 | if (DEBUG)
|
---|
| 590 | ExEnv::outn() << messagegrp()->me() << ": getting ["
|
---|
| 591 | << j << ","
|
---|
| 592 | << b2start << "-" << b2end << ")" << endl;
|
---|
| 593 | }
|
---|
| 594 | else {
|
---|
| 595 | vecj = vec[j-vecoff];
|
---|
| 596 | }
|
---|
| 597 | for (int k=b2start; k<b2end; k++) {
|
---|
| 598 | int blockoffset;
|
---|
| 599 | if (DEBUG)
|
---|
| 600 | ExEnv::outn() << messagegrp()->me() << ": "
|
---|
| 601 | << "using vec[" << j-vecoff << "]"
|
---|
| 602 | << "[" << k << "]" << endl;
|
---|
| 603 | if (form == Row) {
|
---|
| 604 | blockoffset = (j+off)*nbj+k - b2start;
|
---|
| 605 | if (DEBUG)
|
---|
| 606 | ExEnv::outn() << messagegrp()->me() << ": "
|
---|
| 607 | << "Row datum offset is "
|
---|
| 608 | << "(" << j << "+" << off << ")*" << nbj << "+" << k
|
---|
| 609 | << "-" << b2start
|
---|
| 610 | << " = " << blockoffset << "(" << b->ndat() << ") "
|
---|
| 611 | << " -> " << dat[blockoffset] << endl;
|
---|
| 612 | }
|
---|
| 613 | else {
|
---|
| 614 | blockoffset = (k-b2start)*nbj+j+off;
|
---|
| 615 | }
|
---|
| 616 | if (blockoffset >= b->ndat()) {
|
---|
| 617 | fail("bad offset");
|
---|
| 618 | }
|
---|
| 619 | double *datum = &dat[blockoffset];
|
---|
| 620 | if (op == CopyToVec) {
|
---|
| 621 | if (DEBUG)
|
---|
| 622 | ExEnv::outn() << messagegrp()->me() << ": "
|
---|
| 623 | << "copying " << *datum << " "
|
---|
| 624 | << "to " << j << " " << k << endl;
|
---|
| 625 | vecj[k] = *datum;
|
---|
| 626 | }
|
---|
| 627 | else if (op == CopyFromVec) {
|
---|
| 628 | *datum = vecj[k];
|
---|
| 629 | }
|
---|
| 630 | else if (op == AccumToVec) {
|
---|
| 631 | vecj[k] += *datum;
|
---|
| 632 | }
|
---|
| 633 | else if (op == AccumFromVec) {
|
---|
| 634 | *datum += vecj[k];
|
---|
| 635 | }
|
---|
| 636 | }
|
---|
| 637 | }
|
---|
| 638 | }
|
---|
| 639 | }
|
---|
| 640 |
|
---|
| 641 | // does the outer product a x b. this must have rowdim() == a->dim() and
|
---|
| 642 | // coldim() == b->dim()
|
---|
| 643 | void
|
---|
| 644 | DistSCMatrix::accumulate_outer_product(SCVector*a,SCVector*b)
|
---|
| 645 | {
|
---|
| 646 | const char* name = "DistSCMatrix::accumulate_outer_product";
|
---|
| 647 | // make sure that the arguments are of the correct type
|
---|
| 648 | DistSCVector* la = require_dynamic_cast<DistSCVector*>(a,name);
|
---|
| 649 | DistSCVector* lb = require_dynamic_cast<DistSCVector*>(b,name);
|
---|
| 650 |
|
---|
| 651 | // make sure that the dimensions match
|
---|
| 652 | if (!rowdim()->equiv(la->dim()) || !coldim()->equiv(lb->dim())) {
|
---|
| 653 | ExEnv::errn() << indent
|
---|
| 654 | << "DistSCMatrix::accumulate_outer_product(SCVector*a,SCVector*b): "
|
---|
| 655 | << "dimensions don't match\n";
|
---|
| 656 | abort();
|
---|
| 657 | }
|
---|
| 658 |
|
---|
| 659 | Ref<SCMatrixSubblockIter> I = a->all_blocks(SCMatrixSubblockIter::Read);
|
---|
| 660 | Ref<SCMatrixSubblockIter> J = b->all_blocks(SCMatrixSubblockIter::Read);
|
---|
| 661 | for (I->begin(); I->ready(); I->next()) {
|
---|
| 662 | Ref<SCVectorSimpleBlock> vi
|
---|
| 663 | = dynamic_cast<SCVectorSimpleBlock*>(I->block());
|
---|
| 664 | int ni = vi->iend - vi->istart;
|
---|
| 665 | for (J->begin(); J->ready(); J->next()) {
|
---|
| 666 | Ref<SCVectorSimpleBlock> vj
|
---|
| 667 | = dynamic_cast<SCVectorSimpleBlock*>(J->block());
|
---|
| 668 | Ref<SCMatrixRectBlock> rij
|
---|
| 669 | = dynamic_cast<SCMatrixRectBlock*>(block_to_block(vi->blocki,
|
---|
| 670 | vj->blocki).pointer());
|
---|
| 671 | // if the block is held locally sum in the outer prod contrib
|
---|
| 672 | if (rij.nonnull()) {
|
---|
| 673 | int nj = vj->iend - vj->istart;
|
---|
| 674 | double *dat = rij->data;
|
---|
| 675 | for (int i=0; i<ni; i++) {
|
---|
| 676 | for (int j=0; j<nj; j++) {
|
---|
| 677 | *dat += vi->data[i]*vj->data[j];
|
---|
| 678 | }
|
---|
| 679 | }
|
---|
| 680 | }
|
---|
| 681 | }
|
---|
| 682 | }
|
---|
| 683 | }
|
---|
| 684 |
|
---|
| 685 | void
|
---|
| 686 | DistSCMatrix::transpose_this()
|
---|
| 687 | {
|
---|
| 688 | RefSCDimension tmp = d1;
|
---|
| 689 | d1 = d2;
|
---|
| 690 | d2 = tmp;
|
---|
| 691 |
|
---|
| 692 | Ref<SCMatrixBlockList> oldlist = blocklist;
|
---|
| 693 | init_blocklist();
|
---|
| 694 |
|
---|
| 695 | assign(0.0);
|
---|
| 696 |
|
---|
| 697 | Ref<SCMatrixSubblockIter> I
|
---|
| 698 | = new DistSCMatrixListSubblockIter(SCMatrixSubblockIter::Read,
|
---|
| 699 | oldlist,
|
---|
| 700 | messagegrp());
|
---|
| 701 | for (I->begin(); I->ready(); I->next()) {
|
---|
| 702 | Ref<SCMatrixRectBlock> remote
|
---|
| 703 | = dynamic_cast<SCMatrixRectBlock*>(I->block());
|
---|
| 704 | Ref<SCMatrixRectBlock> local
|
---|
| 705 | = dynamic_cast<SCMatrixRectBlock*>(block_to_block(remote->blockj,
|
---|
| 706 | remote->blocki).pointer());
|
---|
| 707 | if (local.nonnull()) {
|
---|
| 708 | int ni = local->iend - local->istart;
|
---|
| 709 | int nj = local->jend - local->jstart;
|
---|
| 710 | for (int i=0; i<ni; i++) {
|
---|
| 711 | for (int j=0; j<nj; j++) {
|
---|
| 712 | local->data[i*nj+j] = remote->data[j*ni+i];
|
---|
| 713 | }
|
---|
| 714 | }
|
---|
| 715 | }
|
---|
| 716 | }
|
---|
| 717 |
|
---|
| 718 | }
|
---|
| 719 |
|
---|
| 720 | double
|
---|
| 721 | DistSCMatrix::invert_this()
|
---|
| 722 | {
|
---|
| 723 | if (nrow() != ncol()) {
|
---|
| 724 | ExEnv::errn() << indent << "DistSCMatrix::invert_this: matrix is not square\n";
|
---|
| 725 | abort();
|
---|
| 726 | }
|
---|
| 727 | RefSymmSCMatrix refs = kit()->symmmatrix(d1);
|
---|
| 728 | refs->assign(0.0);
|
---|
| 729 | refs->accumulate_symmetric_product(this);
|
---|
| 730 | double determ2 = refs->invert_this();
|
---|
| 731 | transpose_this();
|
---|
| 732 | RefSCMatrix reft = copy();
|
---|
| 733 | assign(0.0);
|
---|
| 734 | ((SCMatrix*)this)->accumulate_product(reft.pointer(), refs.pointer());
|
---|
| 735 | return sqrt(fabs(determ2));
|
---|
| 736 | }
|
---|
| 737 |
|
---|
| 738 | void
|
---|
| 739 | DistSCMatrix::gen_invert_this()
|
---|
| 740 | {
|
---|
| 741 | invert_this();
|
---|
| 742 | }
|
---|
| 743 |
|
---|
| 744 | double
|
---|
| 745 | DistSCMatrix::determ_this()
|
---|
| 746 | {
|
---|
| 747 | if (nrow() != ncol()) {
|
---|
| 748 | ExEnv::errn() << indent << "DistSCMatrix::determ_this: matrix is not square\n";
|
---|
| 749 | abort();
|
---|
| 750 | }
|
---|
| 751 | return invert_this();
|
---|
| 752 | }
|
---|
| 753 |
|
---|
| 754 | double
|
---|
| 755 | DistSCMatrix::trace()
|
---|
| 756 | {
|
---|
| 757 | if (nrow() != ncol()) {
|
---|
| 758 | ExEnv::errn() << indent << "DistSCMatrix::trace: matrix is not square\n";
|
---|
| 759 | abort();
|
---|
| 760 | }
|
---|
| 761 |
|
---|
| 762 | double ret=0.0;
|
---|
| 763 | Ref<SCMatrixSubblockIter> I = local_blocks(SCMatrixSubblockIter::Read);
|
---|
| 764 | for (I->begin(); I->ready(); I->next()) {
|
---|
| 765 | Ref<SCMatrixRectBlock> b = dynamic_cast<SCMatrixRectBlock*>(I->block());
|
---|
| 766 | if (b->blocki == b->blockj) {
|
---|
| 767 | int ni = b->iend-b->istart;
|
---|
| 768 | for (int i=0; i<ni; i++) {
|
---|
| 769 | ret += b->data[i*ni+i];
|
---|
| 770 | }
|
---|
| 771 | }
|
---|
| 772 | }
|
---|
| 773 | messagegrp()->sum(ret);
|
---|
| 774 |
|
---|
| 775 | return ret;
|
---|
| 776 | }
|
---|
| 777 |
|
---|
| 778 | double
|
---|
| 779 | DistSCMatrix::solve_this(SCVector*v)
|
---|
| 780 | {
|
---|
| 781 | error("no solve_this");
|
---|
| 782 |
|
---|
| 783 | // make sure that the dimensions match
|
---|
| 784 | if (!rowdim()->equiv(v->dim())) {
|
---|
| 785 | ExEnv::errn() << indent << "DistSCMatrix::solve_this(SCVector*v): "
|
---|
| 786 | << "dimensions don't match\n";
|
---|
| 787 | abort();
|
---|
| 788 | }
|
---|
| 789 |
|
---|
| 790 | return 0.0;
|
---|
| 791 | }
|
---|
| 792 |
|
---|
| 793 | void
|
---|
| 794 | DistSCMatrix::schmidt_orthog(SymmSCMatrix *S, int nc)
|
---|
| 795 | {
|
---|
| 796 | error("no schmidt_orthog");
|
---|
| 797 | }
|
---|
| 798 |
|
---|
| 799 | int
|
---|
| 800 | DistSCMatrix::schmidt_orthog_tol(SymmSCMatrix *S, double tol, double *res)
|
---|
| 801 | {
|
---|
| 802 | error("no schmidt_orthog_tol");
|
---|
| 803 | return 0;
|
---|
| 804 | }
|
---|
| 805 |
|
---|
| 806 | void
|
---|
| 807 | DistSCMatrix::element_op(const Ref<SCElementOp>& op)
|
---|
| 808 | {
|
---|
| 809 | SCMatrixBlockListIter i;
|
---|
| 810 | for (i = blocklist->begin(); i != blocklist->end(); i++) {
|
---|
| 811 | // ExEnv::outn() << "rect elemop processing a block of type "
|
---|
| 812 | // << i.block()->class_name() << endl;
|
---|
| 813 | op->process_base(i.block());
|
---|
| 814 | }
|
---|
| 815 | if (op->has_collect()) op->collect(messagegrp());
|
---|
| 816 | }
|
---|
| 817 |
|
---|
| 818 | void
|
---|
| 819 | DistSCMatrix::element_op(const Ref<SCElementOp2>& op,
|
---|
| 820 | SCMatrix* m)
|
---|
| 821 | {
|
---|
| 822 | DistSCMatrix *lm
|
---|
| 823 | = require_dynamic_cast<DistSCMatrix*>(m,"DistSCMatrix::element_op");
|
---|
| 824 |
|
---|
| 825 | if (!rowdim()->equiv(lm->rowdim()) || !coldim()->equiv(lm->coldim())) {
|
---|
| 826 | ExEnv::errn() << indent << "DistSCMatrix: bad element_op\n";
|
---|
| 827 | abort();
|
---|
| 828 | }
|
---|
| 829 | SCMatrixBlockListIter i, j;
|
---|
| 830 | for (i = blocklist->begin(), j = lm->blocklist->begin();
|
---|
| 831 | i != blocklist->end();
|
---|
| 832 | i++, j++) {
|
---|
| 833 | op->process_base(i.block(), j.block());
|
---|
| 834 | }
|
---|
| 835 | if (op->has_collect()) op->collect(messagegrp());
|
---|
| 836 | }
|
---|
| 837 |
|
---|
| 838 | void
|
---|
| 839 | DistSCMatrix::element_op(const Ref<SCElementOp3>& op,
|
---|
| 840 | SCMatrix* m,SCMatrix* n)
|
---|
| 841 | {
|
---|
| 842 | DistSCMatrix *lm
|
---|
| 843 | = require_dynamic_cast<DistSCMatrix*>(m,"DistSCMatrix::element_op");
|
---|
| 844 | DistSCMatrix *ln
|
---|
| 845 | = require_dynamic_cast<DistSCMatrix*>(n,"DistSCMatrix::element_op");
|
---|
| 846 |
|
---|
| 847 | if (!rowdim()->equiv(lm->rowdim()) || !coldim()->equiv(lm->coldim()) ||
|
---|
| 848 | !rowdim()->equiv(ln->rowdim()) || !coldim()->equiv(ln->coldim())) {
|
---|
| 849 | ExEnv::errn() << indent << "DistSCMatrix: bad element_op\n";
|
---|
| 850 | abort();
|
---|
| 851 | }
|
---|
| 852 | SCMatrixBlockListIter i, j, k;
|
---|
| 853 | for (i = blocklist->begin(),
|
---|
| 854 | j = lm->blocklist->begin(),
|
---|
| 855 | k = ln->blocklist->begin();
|
---|
| 856 | i != blocklist->end();
|
---|
| 857 | i++, j++, k++) {
|
---|
| 858 | op->process_base(i.block(), j.block(), k.block());
|
---|
| 859 | }
|
---|
| 860 | if (op->has_collect()) op->collect(messagegrp());
|
---|
| 861 | }
|
---|
| 862 |
|
---|
| 863 | void
|
---|
| 864 | DistSCMatrix::vprint(const char *title, ostream& os, int prec) const
|
---|
| 865 | {
|
---|
| 866 | // cast so the non const vprint member can be called
|
---|
| 867 | ((DistSCMatrix*)this)->vprint(title,os,prec);
|
---|
| 868 | }
|
---|
| 869 |
|
---|
| 870 | void
|
---|
| 871 | DistSCMatrix::vprint(const char *title, ostream& os, int prec)
|
---|
| 872 | {
|
---|
| 873 | int i,j;
|
---|
| 874 | int lwidth;
|
---|
| 875 | double max=this->maxabs();
|
---|
| 876 |
|
---|
| 877 | int me = messagegrp()->me();
|
---|
| 878 |
|
---|
| 879 | max = (max==0.0) ? 1.0 : log10(max);
|
---|
| 880 | if (max < 0.0) max=1.0;
|
---|
| 881 |
|
---|
| 882 | lwidth = prec+5+(int) max;
|
---|
| 883 |
|
---|
| 884 | os.setf(ios::fixed,ios::floatfield); os.precision(prec);
|
---|
| 885 | os.setf(ios::right,ios::adjustfield);
|
---|
| 886 |
|
---|
| 887 | if (messagegrp()->me() == 0) {
|
---|
| 888 | if (title) os << endl << indent << title << endl;
|
---|
| 889 | else os << endl;
|
---|
| 890 | }
|
---|
| 891 |
|
---|
| 892 | if (nrow()==0 || ncol()==0) {
|
---|
| 893 | if (me == 0) os << indent << "empty matrix\n";
|
---|
| 894 | return;
|
---|
| 895 | }
|
---|
| 896 |
|
---|
| 897 | create_vecform(Row);
|
---|
| 898 | vecform_op(CopyToVec);
|
---|
| 899 |
|
---|
| 900 | int nc = ncol();
|
---|
| 901 |
|
---|
| 902 | int tmp = 0;
|
---|
| 903 | if (me != 0) {
|
---|
| 904 | messagegrp()->recv(me-1, tmp);
|
---|
| 905 | }
|
---|
| 906 | else {
|
---|
| 907 | os << indent;
|
---|
| 908 | for (i=0; i<nc; i++) os << setw(lwidth) << i;
|
---|
| 909 | os << endl;
|
---|
| 910 | }
|
---|
| 911 | for (i=0; i<nvec; i++) {
|
---|
| 912 | os << indent << setw(5) << i+vecoff;
|
---|
| 913 | for (j=0; j<nc; j++) os << setw(lwidth) << vec[i][j];
|
---|
| 914 | os << endl;
|
---|
| 915 | }
|
---|
| 916 | if (messagegrp()->n() > 1) {
|
---|
| 917 | // send the go ahead to the next node
|
---|
| 918 | int dest = me+1;
|
---|
| 919 | if (dest == messagegrp()->n()) dest = 0;
|
---|
| 920 | messagegrp()->send(dest, tmp);
|
---|
| 921 | // make node zero wait on the last node
|
---|
| 922 | if (me == 0) messagegrp()->recv(messagegrp()->n()-1, tmp);
|
---|
| 923 | }
|
---|
| 924 |
|
---|
| 925 | delete_vecform();
|
---|
| 926 | }
|
---|
| 927 |
|
---|
| 928 | Ref<SCMatrixSubblockIter>
|
---|
| 929 | DistSCMatrix::local_blocks(SCMatrixSubblockIter::Access access)
|
---|
| 930 | {
|
---|
| 931 | return new SCMatrixListSubblockIter(access, blocklist);
|
---|
| 932 | }
|
---|
| 933 |
|
---|
| 934 | Ref<SCMatrixSubblockIter>
|
---|
| 935 | DistSCMatrix::all_blocks(SCMatrixSubblockIter::Access access)
|
---|
| 936 | {
|
---|
| 937 | return new DistSCMatrixListSubblockIter(access, blocklist, messagegrp());
|
---|
| 938 | }
|
---|
| 939 |
|
---|
| 940 | void
|
---|
| 941 | DistSCMatrix::error(const char *msg)
|
---|
| 942 | {
|
---|
| 943 | ExEnv::errn() << "DistSCMatrix: error: " << msg << endl;
|
---|
| 944 | }
|
---|
| 945 |
|
---|
| 946 | Ref<DistSCMatrixKit>
|
---|
| 947 | DistSCMatrix::skit()
|
---|
| 948 | {
|
---|
| 949 | return dynamic_cast<DistSCMatrixKit*>(kit().pointer());
|
---|
| 950 | }
|
---|
| 951 |
|
---|
| 952 | /////////////////////////////////////////////////////////////////////////////
|
---|
| 953 |
|
---|
| 954 | // Local Variables:
|
---|
| 955 | // mode: c++
|
---|
| 956 | // c-file-style: "CLJ"
|
---|
| 957 | // End:
|
---|