1 |
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2 | #ifdef __GNUC__
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3 | #pragma implementation
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4 | #endif
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5 |
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6 | #include <stdexcept>
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7 | #include <math.h>
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8 |
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9 | #include <util/keyval/keyval.h>
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10 | #include <util/misc/formio.h>
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11 | #include <util/state/stateio.h>
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12 | #include <math/scmat/matrix.h>
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13 | #include <math/symmetry/pointgrp.h>
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14 | #include <chemistry/molecule/molecule.h>
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15 | #include <chemistry/qc/psi/psiwfn.h>
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16 |
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17 | using namespace std;
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18 |
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19 | namespace sc {
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20 |
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21 | //////////////////////////////////////////////////////////////////////////
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22 |
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23 | static ClassDesc PsiWavefunction_cd(
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24 | typeid(PsiWavefunction),"PsiWavefunction",2,"public Wavefunction",
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25 | 0, 0, 0);
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26 |
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27 | PsiWavefunction::PsiWavefunction(const Ref<KeyVal>&keyval):
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28 | Wavefunction(keyval)
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29 | {
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30 | exenv_ << keyval->describedclassvalue("psienv");
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31 | if (exenv_.null()) {
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32 | ExEnv::err0() << "PsiWavefunction::PsiWavefunction: no Psi execution environment object (psienv)" << endl;
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33 | abort();
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34 | }
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35 |
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36 | nirrep_ = molecule()->point_group()->char_table().order();
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37 | docc_ = read_occ(keyval,"docc",nirrep_);
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38 | socc_ = read_occ(keyval,"socc",nirrep_);
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39 | frozen_docc_ = read_occ(keyval,"frozen_docc",nirrep_);
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40 | frozen_uocc_ = read_occ(keyval,"frozen_uocc",nirrep_);
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41 |
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42 | int bytes = keyval->intvalue("memory");
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43 | if (bytes <= 2000000)
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44 | bytes = 2000000;
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45 | int bytes_str_len = (int)ceil(log10((long double)bytes));
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46 | memory_ = new char[bytes_str_len+5];
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47 | sprintf(memory_,"(%ld B)",bytes);
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48 | }
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49 |
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50 | PsiWavefunction::~PsiWavefunction()
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51 | {
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52 | }
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53 |
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54 | PsiWavefunction::PsiWavefunction(StateIn&s):
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55 | SavableState(s),
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56 | Wavefunction(s)
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57 | {
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58 | throw std::runtime_error("PsiWavefunction::PsiWavefunction(StateIn&) -- cannot restore state of Psi wave functions");
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59 | }
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60 |
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61 | void
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62 | PsiWavefunction::save_data_state(StateOut&s)
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63 | {
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64 | throw std::runtime_error("PsiWavefunction::save_data_state -- cannot save state of Psi wave functions, set savestate = no in your input file");
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65 | }
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66 |
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67 | void
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68 | PsiWavefunction::print(ostream&o) const
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69 | {
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70 | Wavefunction::print(o);
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71 | exenv_->print(o);
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72 | }
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73 |
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74 | void
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75 | PsiWavefunction::compute()
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76 | {
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77 | if (gradient_needed() && !gradient_implemented()) {
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78 | ExEnv::out0() << scprintf("Gradient is not implemented for this Psi wavefunction") << endl;
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79 | abort();
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80 | }
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81 | double energy_acc = desired_value_accuracy();
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82 | double grad_acc = desired_gradient_accuracy();
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83 | if (energy_acc > 1.0e-6) energy_acc = 1.0e-6;
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84 | if (grad_acc > 1.0e-7) grad_acc = 1.0e-7;
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85 | if (gradient_needed() && energy_acc > grad_acc/10.0)
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86 | energy_acc = grad_acc/10.0;
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87 |
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88 | write_input((int)-log10(energy_acc));
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89 | exenv_->run_psi();
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90 |
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91 | // read output
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92 | if (gradient_needed()) {
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93 | Ref<PsiFile11> file11 = exenv_->get_psi_file11();
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94 | file11->open();
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95 |
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96 | set_energy(file11->get_energy(0));
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97 | set_actual_value_accuracy(energy_acc);
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98 |
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99 | int natom_mpqc = molecule()->natom();
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100 | int natom = file11->get_natom(0);
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101 | if (natom != natom_mpqc) {
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102 | ExEnv::out0() << scprintf("Number of atoms in MPQC and Psi3 do not match") << endl;
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103 | abort();
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104 | }
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105 | RefSCVector gradientvec = basis()->matrixkit()->vector(moldim());
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106 | for(int atom=0; atom<natom; atom++) {
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107 | gradientvec[3*atom] = file11->get_grad(0,atom,0);
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108 | gradientvec[3*atom+1] = file11->get_grad(0,atom,1);
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109 | gradientvec[3*atom+2] = file11->get_grad(0,atom,2);
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110 | }
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111 | set_gradient(gradientvec);
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112 | file11->close();
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113 | file11->remove();
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114 | }
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115 | else {
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116 | double energy = 0.0;;
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117 | set_energy(energy);
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118 | set_actual_value_accuracy(energy_acc);
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119 | }
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120 | }
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121 |
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122 | RefSymmSCMatrix
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123 | PsiWavefunction::density()
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124 | {
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125 | abort();
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126 | return 0;
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127 | }
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128 |
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129 | int
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130 | PsiWavefunction::nelectron()
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131 | {
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132 | abort();
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133 | return 0;
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134 | }
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135 |
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136 | void
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137 | PsiWavefunction::write_basic_input(int conv)
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138 | {
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139 | const char *dertype = gradient_needed() ? "first" : "none";
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140 |
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141 | Ref<PsiInput> psiinput = get_psi_input();
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142 | psiinput->write_defaults(exenv_,dertype);
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143 | psiinput->write_keyword("psi:memory",memory_);
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144 | psiinput->begin_section("input");
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145 | psiinput->write_keyword("no_reorient","true");
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146 | psiinput->write_keyword("keep_ref_frame","true");
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147 | psiinput->write_basis(basis());
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148 | if (basis()->max_nfunction_in_shell() != basis()->max_ncartesian_in_shell())
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149 | psiinput->write_keyword("puream","true");
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150 | psiinput->write_geom(molecule());
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151 | psiinput->end_section();
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152 | psiinput->write_basis_sets(basis());
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153 | }
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154 |
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155 | // Shamelessly borrowed from class SCF
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156 | int *
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157 | PsiWavefunction::read_occ(const Ref<KeyVal> &keyval, const char *name, int nirrep)
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158 | {
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159 | int *occ = 0;
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160 | if (keyval->exists(name)) {
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161 | if (keyval->count(name) != nirrep) {
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162 | ExEnv::err0() << indent
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163 | << "ERROR: PsiWavefunction: have " << nirrep << " irreps but "
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164 | << name << " vector is length " << keyval->count(name)
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165 | << endl;
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166 | abort();
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167 | }
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168 | occ = new int[nirrep];
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169 | for (int i=0; i<nirrep; i++) {
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170 | occ[i] = keyval->intvalue(name,i);
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171 | }
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172 | }
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173 | return occ;
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174 | }
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175 |
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176 | //////////////////////////////////////////////////////////////////////////
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177 |
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178 | static ClassDesc PsiSCF_cd(
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179 | typeid(PsiSCF),"PsiSCF",1,"public PsiWavefunction",
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180 | 0, 0, 0);
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181 |
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182 | PsiSCF::PsiSCF(const Ref<KeyVal>&keyval):
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183 | PsiWavefunction(keyval)
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184 | {
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185 | if (!docc_ || !socc_) {
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186 | if (keyval->exists("total_charge") && keyval->exists("multiplicity")) {
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187 | charge_ = keyval->intvalue("total_charge");
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188 | multp_ = keyval->intvalue("multiplicity");
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189 | if (multp_ < 1) {
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190 | ExEnv::err0() << indent
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191 | << "ERROR: PsiSCF: valid multiplicity has to be >= 1" << endl;
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192 | abort();
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193 | }
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194 | }
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195 | else {
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196 | ExEnv::err0() << indent
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197 | << "ERROR: PsiSCF: multiplicity and total_charge need "
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198 | << "to be specified when docc (socc) are missing" << endl;
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199 | abort();
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200 | }
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201 | }
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202 | }
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203 |
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204 | PsiSCF::~PsiSCF()
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205 | {
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206 | }
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207 |
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208 | PsiSCF::PsiSCF(StateIn&s):
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209 | PsiWavefunction(s)
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210 | {
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211 | }
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212 |
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213 | void
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214 | PsiSCF::save_data_state(StateOut&s)
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215 | {
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216 | PsiWavefunction::save_data_state(s);
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217 | }
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218 |
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219 | //////////////////////////////////////////////////////////////////////////
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220 |
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221 | static ClassDesc PsiCLHF_cd(
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222 | typeid(PsiCLHF),"PsiCLHF",1,"public PsiSCF",
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223 | 0, create<PsiCLHF>, create<PsiCLHF>);
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224 |
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225 | PsiCLHF::PsiCLHF(const Ref<KeyVal>&keyval):
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226 | PsiSCF(keyval)
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227 | {
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228 | if (!docc_ && multp_ != 1) {
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229 | ExEnv::err0() << indent
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230 | << "ERROR: PsiCLHF: multiplicity should be 1 for CLHF wave function" << endl;
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231 | abort();
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232 | }
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233 | }
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234 |
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235 | PsiCLHF::~PsiCLHF()
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236 | {
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237 | }
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238 |
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239 | PsiCLHF::PsiCLHF(StateIn&s):
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240 | PsiSCF(s)
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241 | {
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242 | }
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243 |
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244 | void
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245 | PsiCLHF::write_basic_input(int convergence)
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246 | {
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247 | Ref<PsiInput> input = get_psi_input();
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248 | input->write_keyword("psi:reference","rhf");
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249 | if (docc_)
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250 | input->write_keyword_array("psi:docc",nirrep_,docc_);
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251 | else {
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252 | input->write_keyword("psi:multp",multp_);
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253 | input->write_keyword("psi:charge",charge_);
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254 | }
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255 | }
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256 |
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257 | void
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258 | PsiCLHF::write_input(int convergence)
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259 | {
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260 | Ref<PsiInput> input = get_psi_input();
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261 | input->open();
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262 | PsiWavefunction::write_basic_input(convergence);
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263 | write_basic_input(convergence);
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264 | input->write_keyword("psi:wfn","scf");
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265 | input->close();
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266 | }
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267 |
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268 | //////////////////////////////////////////////////////////////////////////
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269 |
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270 | static ClassDesc PsiHSOSHF_cd(
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271 | typeid(PsiHSOSHF),"PsiHSOSHF",1,"public PsiSCF",
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272 | 0, create<PsiHSOSHF>, create<PsiHSOSHF>);
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273 |
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274 | PsiHSOSHF::PsiHSOSHF(const Ref<KeyVal>&keyval):
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275 | PsiSCF(keyval)
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276 | {
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277 | if ((!docc_ || !socc_) && multp_ == 1) {
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278 | ExEnv::err0() << indent
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279 | << "ERROR: PsiHSOSHF: multiplicity should be > 1 for HSOSHF wave function" << endl;
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280 | abort();
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281 | }
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282 | }
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283 |
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284 | PsiHSOSHF::~PsiHSOSHF()
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285 | {
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286 | }
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287 |
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288 | PsiHSOSHF::PsiHSOSHF(StateIn&s):
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289 | PsiSCF(s)
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290 | {
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291 | }
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292 |
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293 | void
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294 | PsiHSOSHF::write_basic_input(int convergence)
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295 | {
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296 | Ref<PsiInput> input = get_psi_input();
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297 | input->write_keyword("psi:reference","rohf");
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298 | if (docc_)
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299 | input->write_keyword_array("psi:docc",nirrep_,docc_);
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300 | if (socc_)
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301 | input->write_keyword_array("psi:socc",nirrep_,socc_);
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302 | }
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303 |
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304 | void
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305 | PsiHSOSHF::write_input(int convergence)
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306 | {
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307 | Ref<PsiInput> input = get_psi_input();
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308 | input->open();
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309 | PsiWavefunction::write_basic_input(convergence);
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310 | write_basic_input(convergence);
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311 | input->write_keyword("psi:wfn","scf");
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312 | input->close();
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313 | }
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314 |
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315 |
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316 | //////////////////////////////////////////////////////////////////////////
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317 |
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318 | static ClassDesc PsiUHF_cd(
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319 | typeid(PsiUHF),"PsiUHF",1,"public PsiSCF",
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320 | 0, create<PsiUHF>, create<PsiUHF>);
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321 |
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322 | PsiUHF::PsiUHF(const Ref<KeyVal>&keyval):
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323 | PsiSCF(keyval)
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324 | {
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325 | }
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326 |
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327 | PsiUHF::~PsiUHF()
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328 | {
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329 | }
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330 |
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331 | PsiUHF::PsiUHF(StateIn&s):
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332 | PsiSCF(s)
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333 | {
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334 | }
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335 |
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336 | void
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337 | PsiUHF::write_basic_input(int convergence)
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338 | {
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339 | Ref<PsiInput> input = get_psi_input();
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340 | input->write_keyword("psi:reference","uhf");
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341 | if (docc_)
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342 | input->write_keyword_array("psi:docc",nirrep_,docc_);
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343 | if (socc_)
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344 | input->write_keyword_array("psi:socc",nirrep_,socc_);
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345 | }
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346 |
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347 | void
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348 | PsiUHF::write_input(int convergence)
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349 | {
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350 | Ref<PsiInput> input = get_psi_input();
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351 | input->open();
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352 | PsiWavefunction::write_basic_input(convergence);
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353 | write_basic_input(convergence);
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354 | input->write_keyword("psi:wfn","scf");
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355 | input->close();
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356 | }
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357 |
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358 | //////////////////////////////////////////////////////////////////////////
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359 |
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360 | static ClassDesc PsiCCSD_cd(
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361 | typeid(PsiCCSD),"PsiCCSD",1,"public PsiWavefunction",
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362 | 0, create<PsiCCSD>, create<PsiCCSD>);
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363 |
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364 | PsiCCSD::PsiCCSD(const Ref<KeyVal>&keyval):
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365 | PsiWavefunction(keyval)
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366 | {
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367 | reference_ << keyval->describedclassvalue("reference");
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368 | if (reference_.null()) {
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369 | ExEnv::err0() << "PsiCCSD::PsiCCSD: no reference wavefunction" << endl;
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370 | abort();
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371 | }
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372 | }
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373 |
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374 | PsiCCSD::~PsiCCSD()
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375 | {
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376 | }
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377 |
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378 | PsiCCSD::PsiCCSD(StateIn&s):
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379 | PsiWavefunction(s)
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380 | {
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381 | reference_ << SavableState::restore_state(s);
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382 | }
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383 |
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384 | int
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385 | PsiCCSD::gradient_implemented() const
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386 | {
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387 | int impl = 0;
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388 | PsiSCF::RefType reftype = reference_->reftype();
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389 | if (reftype == PsiSCF::rhf || reftype == PsiSCF::hsoshf)
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390 | impl = 1;
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391 | return impl;
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392 | }
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393 |
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394 | void
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395 | PsiCCSD::save_data_state(StateOut&s)
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396 | {
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397 | PsiWavefunction::save_data_state(s);
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398 | SavableState::save_state(reference_.pointer(),s);
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399 | }
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400 |
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401 | void
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402 | PsiCCSD::write_input(int convergence)
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403 | {
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404 | if (gradient_needed())
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405 | reference_->do_gradient(1);
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406 | else
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407 | reference_->do_gradient(0);
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408 |
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409 | Ref<PsiInput> input = get_psi_input();
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410 | input->open();
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411 | PsiWavefunction::write_basic_input(convergence);
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412 | reference_->write_basic_input(convergence);
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413 | input->write_keyword("psi:wfn","ccsd");
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414 | if (frozen_docc_)
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415 | input->write_keyword_array("psi:frozen_docc",nirrep_,frozen_docc_);
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416 | if (frozen_uocc_)
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417 | input->write_keyword_array("psi:frozen_uocc",nirrep_,frozen_uocc_);
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418 | input->close();
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419 | }
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420 |
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421 | //////////////////////////////////////////////////////////////////////////
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422 |
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423 | static ClassDesc PsiCCSD_T_cd(
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424 | typeid(PsiCCSD_T),"PsiCCSD_T",1,"public PsiWavefunction",
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425 | 0, create<PsiCCSD_T>, create<PsiCCSD_T>);
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426 |
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427 | PsiCCSD_T::PsiCCSD_T(const Ref<KeyVal>&keyval):
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428 | PsiWavefunction(keyval)
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429 | {
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430 | reference_ << keyval->describedclassvalue("reference");
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431 | if (reference_.null()) {
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432 | ExEnv::err0() << "PsiCCSD_T::PsiCCSD_T: no reference wavefunction" << endl;
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433 | abort();
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434 | }
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435 |
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436 | PsiSCF::RefType reftype = reference_->reftype();
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437 | if (reftype == PsiSCF::hsoshf) {
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438 | ExEnv::err0() << "PsiCCSD_T::PsiCCSD_T: HSOSHF-based CCSD(T) has not been implemented yet" << endl;
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439 | abort();
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440 | }
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441 | }
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442 |
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443 | PsiCCSD_T::~PsiCCSD_T()
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444 | {
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445 | }
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446 |
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447 | PsiCCSD_T::PsiCCSD_T(StateIn&s):
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448 | PsiWavefunction(s)
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449 | {
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450 | reference_ << SavableState::restore_state(s);
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451 | }
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452 |
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453 | int
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454 | PsiCCSD_T::gradient_implemented() const
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455 | {
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456 | int impl = 0;
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457 | PsiSCF::RefType reftype = reference_->reftype();
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458 | return impl;
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459 | }
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460 |
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461 | void
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462 | PsiCCSD_T::save_data_state(StateOut&s)
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463 | {
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464 | PsiWavefunction::save_data_state(s);
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465 | SavableState::save_state(reference_.pointer(),s);
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466 | }
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467 |
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468 | void
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469 | PsiCCSD_T::write_input(int convergence)
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470 | {
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471 | if (gradient_needed())
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472 | reference_->do_gradient(1);
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473 | else
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474 | reference_->do_gradient(0);
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475 |
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476 | Ref<PsiInput> input = get_psi_input();
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477 | input->open();
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478 | PsiWavefunction::write_basic_input(convergence);
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479 | reference_->write_basic_input(convergence);
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480 | input->write_keyword("psi:wfn","ccsd");
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481 | input->begin_section("psi");
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482 | input->write_keyword("exec","(\"cints\" \"cscf\" \"transqt\" \"ccsort\" \"ccenergy\" \"cchbar\" \"cctriples\")");
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483 | input->end_section();
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484 | if (frozen_docc_)
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485 | input->write_keyword_array("psi:frozen_docc",nirrep_,frozen_docc_);
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486 | if (frozen_uocc_)
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487 | input->write_keyword_array("psi:frozen_uocc",nirrep_,frozen_uocc_);
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488 | input->close();
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489 | }
|
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490 |
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491 | //////////////////////////////////////////////////////////////////////////
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492 |
|
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493 | }
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494 |
|
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495 | // Local Variables:
|
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496 | // mode: c++
|
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497 | // c-file-style: "CLJ"
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498 | // End:
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