1 | //
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2 | // transform_13inds.cc
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3 | //
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4 | // Copyright (C) 2001 Edward Valeev
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5 | //
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6 | // Author: Edward Valeev <edward.valeev@chemistry.gatech.edu>
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7 | // Maintainer: EV
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8 | //
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9 | // This file is part of the SC Toolkit.
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10 | //
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11 | // The SC Toolkit is free software; you can redistribute it and/or modify
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12 | // it under the terms of the GNU Library General Public License as published by
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13 | // the Free Software Foundation; either version 2, or (at your option)
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14 | // any later version.
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15 | //
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16 | // The SC Toolkit is distributed in the hope that it will be useful,
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17 | // but WITHOUT ANY WARRANTY; without even the implied warranty of
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18 | // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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19 | // GNU Library General Public License for more details.
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20 | //
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21 | // You should have received a copy of the GNU Library General Public License
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22 | // along with the SC Toolkit; see the file COPYING.LIB. If not, write to
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23 | // the Free Software Foundation, 675 Mass Ave, Cambridge, MA 02139, USA.
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24 | //
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25 | // The U.S. Government is granted a limited license as per AL 91-7.
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26 | //
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27 |
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28 | #ifdef __GNUC__
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29 | #pragma implementation
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30 | #endif
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31 |
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32 | #include <math.h>
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33 | #include <stdexcept>
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34 |
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35 | #include <util/misc/formio.h>
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36 | #include <util/misc/timer.h>
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37 | #include <chemistry/qc/basis/gpetite.h>
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38 | #include <chemistry/qc/mbpt/bzerofast.h>
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39 | #include <chemistry/qc/mbpt/util.h>
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40 | #include <chemistry/qc/basis/distshpair.h>
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41 | #include <chemistry/qc/mbptr12/blas.h>
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42 | #include <chemistry/qc/mbptr12/transform_13inds.h>
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43 |
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44 | using namespace std;
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45 | using namespace sc;
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46 |
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47 | #define PRINT1Q 0
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48 | #define PRINT2Q 0
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49 | #define PRINT_NUM_TE_TYPES 1
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50 |
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51 | // The FAST_BUT_WRONG flags is useful for exercising the communications
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52 | // layer. It causes the first and second quarter transformation to be
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53 | // omitted, but all communication is still performed. This permits
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54 | // problems in communications libraries to be more quickly identified.
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55 | #define FAST_BUT_WRONG 0
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56 |
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57 | TwoBodyMOIntsTransform_13Inds::TwoBodyMOIntsTransform_13Inds(
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58 | const Ref<TwoBodyMOIntsTransform>& tform, int mythread, int nthread,
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59 | const Ref<ThreadLock>& lock, const Ref<TwoBodyInt> &tbint, double tol, int debug) :
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60 | tform_(tform), mythread_(mythread), nthread_(nthread), lock_(lock), tbint_(tbint),
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61 | tol_(tol), debug_(debug)
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62 | {
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63 | timer_ = new RegionTimer();
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64 | aoint_computed_ = 0;
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65 | ni_ = tform_->batchsize();
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66 | i_offset_ = 0;
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67 | }
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68 |
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69 | TwoBodyMOIntsTransform_13Inds::~TwoBodyMOIntsTransform_13Inds()
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70 | {
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71 | timer_ = 0;
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72 | }
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73 |
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74 | /*
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75 | Distribute work by SR
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76 |
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77 | for all PQ
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78 | compute unique (PQ|RS)
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79 | transform to (IM|RS) stored as rsim where M are all AOs for basis set 2
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80 | end PQ
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81 |
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82 | transform (IM|RS) to (IM|JS) stored as ijsm and accumulate to the tasks that holds respective ij-pairs.
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83 |
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84 | end SR
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85 | */
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86 |
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87 | void
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88 | TwoBodyMOIntsTransform_13Inds::run()
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89 | {
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90 | Ref<MemoryGrp> mem = tform_->mem();
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91 | Ref<MessageGrp> msg = tform_->msg();
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92 | Ref<R12IntsAcc> ints_acc = tform_->ints_acc();
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93 | const int me = msg->me();
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94 | const int nproc = msg->n();
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95 | Ref<MOIndexSpace> space1 = tform_->space1();
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96 | Ref<MOIndexSpace> space2 = tform_->space2();
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97 | Ref<MOIndexSpace> space3 = tform_->space3();
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98 | Ref<MOIndexSpace> space4 = tform_->space4();
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99 |
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100 | Ref<GaussianBasisSet> bs1 = space1->basis();
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101 | Ref<GaussianBasisSet> bs2 = space2->basis();
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102 | Ref<GaussianBasisSet> bs3 = space3->basis();
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103 | Ref<GaussianBasisSet> bs4 = space4->basis();
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104 | const bool bs1_eq_bs2 = (bs1 == bs2);
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105 | const bool bs3_eq_bs4 = (bs3 == bs4);
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106 |
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107 | const bool dynamic = tform_->dynamic();
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108 | const double print_percent = tform_->print_percent();
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109 |
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110 | const int ni = ni_;
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111 | const int rank1 = space1->rank();
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112 | const int rank3 = space3->rank();
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113 | const int nfuncmax1 = bs1->max_nfunction_in_shell();
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114 | const int nfuncmax2 = bs2->max_nfunction_in_shell();
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115 | const int nfuncmax3 = bs3->max_nfunction_in_shell();
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116 | const int nfuncmax4 = bs4->max_nfunction_in_shell();
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117 | const int nsh1 = bs1->nshell();
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118 | const int nsh2 = bs2->nshell();
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119 | const int nsh3 = bs3->nshell();
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120 | const int nsh4 = bs4->nshell();
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121 | const int nbasis1 = bs1->nbasis();
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122 | const int nbasis2 = bs2->nbasis();
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123 | const int nbasis3 = bs3->nbasis();
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124 | const int nbasis4 = bs4->nbasis();
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125 | double dtol = pow(2.0,tol_);
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126 | const size_t memgrp_blksize = tform_->memgrp_blksize()/sizeof(double);
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127 |
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128 | double** vector1 = new double*[nbasis1];
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129 | double** vector3 = new double*[nbasis3];
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130 | vector1[0] = new double[rank1*nbasis1];
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131 | vector3[0] = new double[rank3*nbasis3];
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132 | for(int i=1; i<nbasis1; i++) vector1[i] = vector1[i-1] + rank1;
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133 | for(int i=1; i<nbasis3; i++) vector3[i] = vector3[i-1] + rank3;
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134 | space1->coefs().convert(vector1);
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135 | space3->coefs().convert(vector3);
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136 |
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137 | /*-------------------------------------------------------------
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138 | Find integrals buffers to 1/r12, r12, and [r12,T1] integrals
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139 | -------------------------------------------------------------*/
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140 | const int num_te_types = tform_->num_te_types();
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141 | const double *intbuf[TwoBodyInt::num_tbint_types];
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142 | intbuf[TwoBodyInt::eri] = tbint_->buffer(TwoBodyInt::eri);
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143 | intbuf[TwoBodyInt::r12] = tbint_->buffer(TwoBodyInt::r12);
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144 | intbuf[TwoBodyInt::r12t1] = tbint_->buffer(TwoBodyInt::r12t1);
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145 | intbuf[TwoBodyInt::r12t2] = tbint_->buffer(TwoBodyInt::r12t2);
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146 |
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147 | /*-----------------------------------------------------
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148 | Allocate buffers for partially transformed integrals
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149 | -----------------------------------------------------*/
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150 | double *ijsq_contrib; // local contributions to integral_ijsq
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151 | double *ijrq_contrib; // local contributions to integral_ijrq
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152 | double **rsiq_ints = new double*[num_te_types]; // quarter-transformed integrals for each RS pair
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153 | for(int te_type=0;te_type<num_te_types;te_type++) {
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154 | rsiq_ints[te_type] = new double[ni*nbasis2*nfuncmax3*nfuncmax4];
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155 | }
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156 | ijsq_contrib = mem->malloc_local_double(nbasis2*nfuncmax4);
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157 | if (bs3_eq_bs4)
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158 | ijrq_contrib = mem->malloc_local_double(nbasis2*nfuncmax4);
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159 | else
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160 | ijrq_contrib = NULL;
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161 |
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162 | /*-----------------------------
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163 | Initialize work distribution
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164 | -----------------------------*/
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165 | sc::DistShellPair shellpairs(msg,nthread_,mythread_,lock_,bs4,bs3,dynamic,
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166 | tform_->shell_pair_data());
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167 | shellpairs.set_debug(debug_);
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168 | if (debug_) shellpairs.set_print_percent(print_percent/10.0);
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169 | else shellpairs.set_print_percent(print_percent);
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170 | int work_per_thread = bs3_eq_bs4 ?
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171 | ((nsh3*(nsh3+1))/2)/(nproc*nthread_) :
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172 | (nsh3*nsh4)/(nproc*nthread_) ;
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173 | int print_interval = work_per_thread/100;
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174 | int time_interval = work_per_thread/10;
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175 | int print_index = 0;
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176 | if (print_interval == 0) print_interval = 1;
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177 | if (time_interval == 0) time_interval = 1;
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178 | if (work_per_thread == 0) work_per_thread = 1;
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179 |
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180 | if (debug_) {
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181 | lock_->lock();
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182 | ExEnv::outn() << scprintf("%d:%d: starting get_task loop",me,mythread_) << endl;
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183 | lock_->unlock();
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184 | }
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185 |
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186 | Ref<GenPetite4> p4list
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187 | = construct_gpetite(bs1,bs2,bs3,bs4);
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188 |
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189 | #if FAST_BUT_WRONG
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190 | for(int te_type=0;te_type<num_te_types;te_type++) {
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191 | bzerofast(rsiq_ints[te_type], ni*nbasis2*nfuncmax3*nfuncmax4);
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192 | bzerofast(ijsq_contrib[te_type], nbasis2*nfuncmax4);
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193 | if (bs3_eq_bs4)
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194 | bzerofast(ijrq_contrib[te_type], nbasis2*nfuncmax4);
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195 | }
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196 | #endif
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197 |
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198 | int R = 0;
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199 | int S = 0;
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200 | while (shellpairs.get_task(S,R)) {
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201 | // if bs3_eq_bs4 then S >= R always (see sc::exp::DistShellPair)
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202 | int nr = bs3->shell(R).nfunction();
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203 | int r_offset = bs3->shell_to_function(R);
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204 |
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205 | int ns = bs4->shell(S).nfunction();
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206 | int s_offset = bs4->shell_to_function(S);
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207 |
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208 | int nrs = nr*ns;
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209 |
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210 | if (debug_ > 1 && (print_index++)%print_interval == 0) {
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211 | lock_->lock();
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212 | ExEnv::outn() << scprintf("%d:%d: (PQ|%d %d) %d%%",
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213 | me,mythread_,R,S,(100*print_index)/work_per_thread)
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214 | << endl;
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215 | lock_->unlock();
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216 | }
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217 | if (debug_ > 1 && (print_index)%time_interval == 0) {
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218 | lock_->lock();
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219 | ExEnv::outn() << scprintf("timer for %d:%d:",me,mythread_) << endl;
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220 | timer_->print();
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221 | lock_->unlock();
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222 | }
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223 |
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224 | #if !FAST_BUT_WRONG
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225 | // Zero out 1 q.t. storage
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226 | for(int te_type=0;te_type<num_te_types;te_type++)
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227 | bzerofast(rsiq_ints[te_type], nrs*ni*nbasis2);
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228 |
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229 | for (int P=0; P<nsh1; P++) {
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230 | int np = bs1->shell(P).nfunction();
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231 | int p_offset = bs1->shell_to_function(P);
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232 |
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233 | int Qmax = (bs1_eq_bs2 ? P : nsh2-1);
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234 | for (int Q=0; Q<=Qmax; Q++) {
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235 | int nq = bs2->shell(Q).nfunction();
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236 | int q_offset = bs2->shell_to_function(Q);
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237 |
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238 | // check if symmetry unique and compute degeneracy
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239 | int deg = p4list->in_p4(P,Q,R,S);
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240 | if (deg == 0)
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241 | continue;
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242 | double symfac = (double) deg;
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243 |
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244 | if (tbint_->log2_shell_bound(P,Q,R,S) < tol_) {
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245 | continue; // skip shell quartets less than tol
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246 | }
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247 |
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248 | aoint_computed_++;
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249 |
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250 | timer_->enter("AO integrals");
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251 | tbint_->compute_shell(P,Q,R,S);
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252 | timer_->exit("AO integrals");
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253 |
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254 | timer_->enter("1. q.t.");
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255 |
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256 | // Begin first quarter transformation;
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257 | // generate (iq|rs) for i active
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258 | // if bs1_eq_bs2 then (ip|rs) are also generated
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259 | // store the integrals as rsiq
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260 | for(int te_type=0; te_type<num_te_types; te_type++) {
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261 | const double *pqrs_ptr = intbuf[te_type];
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262 |
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263 | for (int bf1 = 0; bf1 < np; bf1++) {
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264 | int p = p_offset + bf1;
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265 | int qmax = (bs1_eq_bs2 && P == Q) ? bf1 : nq-1;
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266 |
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267 | for (int bf2 = 0; bf2 <= qmax; bf2++) {
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268 | int q = q_offset + bf2;
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269 |
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270 | for (int bf3 = 0; bf3 < nr; bf3++) {
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271 | int smin = (bs3_eq_bs4 && R == S) ? bf3 : 0;
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272 | pqrs_ptr += smin;
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273 |
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274 | for (int bf4 = smin; bf4 <ns; bf4++) {
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275 |
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276 | // Only transform integrals larger than the threshold
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277 | if (fabs(*pqrs_ptr) > dtol) {
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278 |
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279 | double* rsiq_ptr = &rsiq_ints[te_type][q + nbasis2*(0 + ni*(bf4 + ns*bf3))];
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280 | const double* c_pi = vector1[p] + i_offset_;
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281 |
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282 | double* rsip_ptr;
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283 | const double* c_qi;
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284 | if (bs1_eq_bs2) {
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285 | rsip_ptr = &rsiq_ints[te_type][p + nbasis2*(0 + ni*(bf4 + ns*bf3))];
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286 | c_qi = vector1[q] + i_offset_;
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287 | }
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288 |
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289 | double rsiq_int_contrib = *pqrs_ptr;
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290 | // multiply each integral by its symmetry degeneracy factor
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291 | rsiq_int_contrib *= symfac;
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292 |
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293 | if (bs1_eq_bs2) {
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294 |
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295 | double rsip_int_contrib = rsiq_int_contrib;
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296 | if (te_type == TwoBodyInt::r12t1)
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297 | rsip_int_contrib = -1.0*rsiq_int_contrib;
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298 |
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299 | if (p == q) {
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300 | for (int i=0; i<ni; i++) {
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301 | *rsiq_ptr += *c_pi++ * rsiq_int_contrib;
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302 | rsiq_ptr += nbasis2;
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303 | }
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304 | }
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305 | else {
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306 | // p != q
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307 | for (int i=0; i<ni; i++) {
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308 | *rsip_ptr += *c_qi++ * rsip_int_contrib;
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309 | rsip_ptr += nbasis2;
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310 | *rsiq_ptr += *c_pi++ * rsiq_int_contrib;
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311 | rsiq_ptr += nbasis2;
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312 | }
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313 | }
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314 |
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315 | }
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316 | else {
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317 |
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318 | for (int i=0; i<ni; i++) {
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319 | *rsiq_ptr += *c_pi++ * rsiq_int_contrib;
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320 | rsiq_ptr += nbasis2;
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321 | }
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322 |
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323 | } // endif bs1_eq_bs2
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324 | } // endif dtol
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325 |
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326 | pqrs_ptr++;
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327 | } // exit bf4 loop
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328 | } // exit bf3 loop
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329 | } // exit bf2 loop
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330 | pqrs_ptr += (nq - qmax - 1) * nrs;
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331 | } // exit bf1 loop
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332 | // end of first quarter transformation
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333 | }
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334 | timer_->exit("1. q.t.");
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335 |
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336 | } // exit P loop
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337 | } // exit Q loop
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338 | #endif // !FAST_BUT_WRONG
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339 |
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340 | #if PRINT1Q
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341 | {
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342 | lock_->lock();
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343 | for(int te_type=0; te_type<PRINT_NUM_TE_TYPES; te_type++) {
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344 | for (int i = 0; i<ni; i++) {
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345 | for (int q = 0; q<nbasis2; q++) {
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346 | for (int r = 0; r<nr; r++) {
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347 | int rr = r+r_offset;
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348 | for (int s = 0; s<ns; s++) {
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349 | int ss = s+s_offset;
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350 | double value = rsiq_ints[te_type][q+nbasis2*(i+ni*(s+ns*r))];
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351 | printf("1Q: type = %d (%d %d|%d %d) = %12.8f\n",
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352 | te_type,i+i_offset_,q,rr,ss,value);
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353 | }
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354 | }
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355 | }
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356 | }
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357 | }
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358 | lock_->unlock();
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359 | }
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360 | #endif
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361 |
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362 | const int niq = ni*nbasis2;
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363 |
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364 | timer_->enter("2. q.t.");
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365 | // Begin second quarter transformation;
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366 | // generate (iq|js) stored as ijsq (also generate (iq|jr), if needed)
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367 |
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368 | for(int te_type=0; te_type<num_te_types; te_type++) {
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369 | for (int i=0; i<ni; i++) {
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370 | for (int j=0; j<rank3; j++) {
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371 |
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372 | #if !FAST_BUT_WRONG
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373 | bzerofast(ijsq_contrib, nbasis2*ns);
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374 | if (bs3_eq_bs4)
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375 | bzerofast(ijrq_contrib, nbasis2*nr);
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376 |
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377 | int ij_proc = (i*rank3 + j)%nproc;
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378 | int ij_index = (i*rank3 + j)/nproc;
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379 | const size_t ijsq_start = (size_t)(num_te_types*ij_index + te_type) * memgrp_blksize;
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380 | const double *rsiq_ptr = rsiq_ints[te_type] + i*nbasis2;
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381 |
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382 | if (bs3_eq_bs4) {
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383 |
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384 | for (int bf3 = 0; bf3 < nr; bf3++) {
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385 | int r = r_offset + bf3;
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386 | int smin = (bs3_eq_bs4 && R == S) ? bf3 : 0;
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387 | rsiq_ptr += smin*niq;
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388 |
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389 | for (int bf4 = smin; bf4 <ns; bf4++, rsiq_ptr+=niq) {
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390 | int s = s_offset + bf4;
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391 |
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392 | // second quarter transform
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393 | // rs = js
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394 | // rs = jr
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395 |
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396 | double* ijsq_ptr = ijsq_contrib + bf4*nbasis2;
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397 | double* ijrq_ptr = ijrq_contrib + bf3*nbasis2;
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398 | const double* i_ptr = rsiq_ptr;
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399 |
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400 | const double c_rj = vector3[r][j];
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401 | const double c_sj = vector3[s][j];
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402 |
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403 | if (r != s) {
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404 | for (int q=0; q<nbasis2; q++) {
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405 |
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406 | double value = *i_ptr++;
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407 | *ijsq_ptr++ += c_rj * value;
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408 | *ijrq_ptr++ += c_sj * value;
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409 |
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410 | }
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411 | }
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412 | else {
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413 | for (int q=0; q<nbasis2; q++) {
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414 |
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415 | double value = *i_ptr++;
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416 | *ijsq_ptr++ += c_rj * value;
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417 |
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418 | }
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419 | }
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420 | }
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421 | }
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422 | }
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423 | else {
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424 |
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425 | for (int bf3 = 0; bf3 < nr; bf3++) {
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426 | int r= r_offset + bf3;
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427 | double* ijsq_ptr = ijsq_contrib;
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428 |
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429 | for (int bf4 = 0; bf4 <ns; bf4++, rsiq_ptr+=niq) {
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430 |
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431 | // second quarter transform
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432 | // rs = js
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433 | const double* i_ptr = rsiq_ptr;
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434 |
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435 | const double c_rj = vector3[r][j];
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436 |
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437 | for (int q=0; q<nbasis2; q++) {
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438 |
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439 | double value = *i_ptr++;
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440 | *ijsq_ptr++ += c_rj * value;
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441 |
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442 | }
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443 | }
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444 | }
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445 | }
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446 |
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447 | // We now have contributions to ijsq (and ijrq) for one pair i,j,
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448 | // all q, and s in S (r in R); send ijsq (and ijrq) to the node
|
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449 | // (ij_proc) which is going to have this ij pair
|
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450 | #endif // !FAST_BUT_WRONG
|
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451 |
|
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452 | // Sum the ijsq_contrib to the appropriate place
|
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453 | size_t ij_offset = (size_t)nbasis2*s_offset + ijsq_start;
|
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454 | mem->sum_reduction_on_node(ijsq_contrib,
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455 | ij_offset, ns*nbasis2, ij_proc);
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456 |
|
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457 | if (bs3_eq_bs4) {
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458 | size_t ij_offset = (size_t)nbasis2*r_offset + ijsq_start;
|
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459 | mem->sum_reduction_on_node(ijrq_contrib,
|
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460 | ij_offset, nr*nbasis2, ij_proc);
|
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461 | }
|
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462 |
|
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463 | } // endif j
|
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464 | } // endif i
|
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465 | } // endif te_type
|
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466 | timer_->exit("2. q.t.");
|
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467 |
|
---|
468 | } // exit while get_task
|
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469 |
|
---|
470 | if (debug_) {
|
---|
471 | lock_->lock();
|
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472 | ExEnv::outn() << scprintf("%d:%d: done with get_task loop",me,mythread_) << endl;
|
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473 | lock_->unlock();
|
---|
474 | }
|
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475 |
|
---|
476 | for(int te_type=0; te_type<num_te_types; te_type++) {
|
---|
477 | delete[] rsiq_ints[te_type];
|
---|
478 | }
|
---|
479 | delete[] rsiq_ints;
|
---|
480 | mem->free_local_double(ijsq_contrib);
|
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481 | if (bs3_eq_bs4)
|
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482 | mem->free_local_double(ijrq_contrib);
|
---|
483 | delete[] vector1[0]; delete[] vector1;
|
---|
484 | delete[] vector3[0]; delete[] vector3;
|
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485 | }
|
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486 |
|
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487 | ////////////////////////////////////////////////////////////////////////////
|
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488 |
|
---|
489 | // Local Variables:
|
---|
490 | // mode: c++
|
---|
491 | // c-file-style: "CLJ-CONDENSED"
|
---|
492 | // End:
|
---|