1 | //
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2 | // r12ia_node0file.cc
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3 | //
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4 | // Copyright (C) 2002 Edward Valeev
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5 | //
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6 | // Author: Edward Valeev <edward.valeev@chemistry.gatech.edu>
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7 | // Maintainer: EV
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8 | //
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9 | // This file is part of the SC Toolkit.
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10 | //
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11 | // The SC Toolkit is free software; you can redistribute it and/or modify
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12 | // it under the terms of the GNU Library General Public License as published by
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13 | // the Free Software Foundation; either version 2, or (at your option)
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14 | // any later version.
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15 | //
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16 | // The SC Toolkit is distributed in the hope that it will be useful,
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17 | // but WITHOUT ANY WARRANTY; without even the implied warranty of
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18 | // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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19 | // GNU Library General Public License for more details.
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20 | //
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21 | // You should have received a copy of the GNU Library General Public License
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22 | // along with the SC Toolkit; see the file COPYING.LIB. If not, write to
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23 | // the Free Software Foundation, 675 Mass Ave, Cambridge, MA 02139, USA.
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24 | //
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25 | // The U.S. Government is granted a limited license as per AL 91-7.
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26 | //
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27 |
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28 | #ifdef __GNUC__
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29 | #pragma implementation
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30 | #endif
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31 |
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32 | #include <stdexcept>
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33 | #include <util/class/scexception.h>
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34 | #include <sys/types.h>
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35 | #include <sys/stat.h>
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36 | #include <fcntl.h>
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37 | #include <errno.h>
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38 | #include <stdlib.h>
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39 | #include <util/misc/string.h>
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40 | #include <util/misc/formio.h>
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41 | #include <util/misc/exenv.h>
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42 | #include <chemistry/qc/mbptr12/r12ia_node0file.h>
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43 |
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44 | #define CREATE_FILE_ON_NODE0_ONLY 1
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45 |
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46 | using namespace std;
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47 | using namespace sc;
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48 |
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49 | ///////////////////////////////////////////////////////////////
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50 |
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51 | static ClassDesc R12IntsAcc_Node0File_cd(
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52 | typeid(R12IntsAcc_Node0File),"R12IntsAcc_Node0File",1,"public R12IntsAcc",
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53 | 0, 0, create<R12IntsAcc_Node0File>);
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54 |
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55 | R12IntsAcc_Node0File::R12IntsAcc_Node0File(Ref<MemoryGrp>& mem, const char* filename, int num_te_types,
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56 | int ni, int nj, int nx, int ny) :
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57 | R12IntsAcc(num_te_types, ni, nj, nx, ny)
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58 | {
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59 | mem_ = mem;
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60 | filename_ = strdup(filename);
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61 |
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62 | init(false);
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63 | }
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64 |
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65 | R12IntsAcc_Node0File::R12IntsAcc_Node0File(StateIn& si) :
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66 | R12IntsAcc(si)
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67 | {
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68 | mem_ = MemoryGrp::get_default_memorygrp();
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69 | si.getstring(filename_);
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70 |
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71 | init(true);
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72 | }
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73 |
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74 | R12IntsAcc_Node0File::~R12IntsAcc_Node0File()
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75 | {
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76 | for(int i=0;i<ni_;i++)
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77 | for(int j=0;j<nj_;j++) {
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78 | if (!is_avail(i,j)) {
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79 | int ij = ij_index(i,j);
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80 | for(int oper_type=0; oper_type<num_te_types(); oper_type++)
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81 | if (pairblk_[ij].ints_[oper_type] != NULL) {
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82 | ExEnv::outn() << indent << taskid() << ": i = " << i << " j = " << j << " oper_type = " << oper_type << endl;
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83 | throw std::runtime_error("Logic error: R12IntsAcc_Node0File::~ : some nonlocal blocks have not been released!");
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84 | }
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85 | }
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86 | }
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87 | delete[] pairblk_;
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88 |
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89 | // Destroy the file
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90 | #if CREATE_FILE_ON_NODE0_ONLY
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91 | if (taskid() == 0)
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92 | #endif
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93 | unlink(filename_);
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94 | free(filename_);
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95 | }
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96 |
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97 | void
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98 | R12IntsAcc_Node0File::save_data_state(StateOut& so)
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99 | {
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100 | R12IntsAcc::save_data_state(so);
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101 | so.putstring(filename_);
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102 | }
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103 |
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104 | void
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105 | R12IntsAcc_Node0File::init(bool restart)
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106 | {
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107 | pairblk_ = new struct PairBlkInfo[ni_*nj_];
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108 | int i, j, ij;
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109 | for(i=0,ij=0;i<ni_;i++)
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110 | for(j=0;j<nj_;j++,ij++) {
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111 | pairblk_[ij].ints_[eri] = NULL;
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112 | pairblk_[ij].ints_[r12] = NULL;
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113 | pairblk_[ij].ints_[r12t1] = NULL;
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114 | pairblk_[ij].ints_[r12t2] = NULL;
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115 | pairblk_[ij].refcount_[eri] = 0;
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116 | pairblk_[ij].refcount_[r12] = 0;
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117 | pairblk_[ij].refcount_[r12t1] = 0;
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118 | pairblk_[ij].refcount_[r12t2] = 0;
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119 | pairblk_[ij].offset_ = (off_t)ij*blocksize_;
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120 | }
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121 |
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122 | // node 0 will have the file
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123 | #if CREATE_FILE_ON_NODE0_ONLY
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124 | if (taskid() != 0)
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125 | return;
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126 | #endif
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127 |
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128 | // See if can open/create the file
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129 | if (restart) {
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130 | datafile_ = open(filename_,O_WRONLY|O_APPEND,0644);
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131 | }
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132 | else {
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133 | datafile_ = creat(filename_,0644);
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134 | }
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135 | // Check if the file was opened correctly
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136 | check_filedescr_();
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137 | // If everything is fine close it and proceed
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138 | close(datafile_);
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139 | }
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140 |
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141 | void
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142 | R12IntsAcc_Node0File::check_filedescr_()
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143 | {
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144 | // If the file was not opened correctly - throw an exception
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145 | if (datafile_ == -1) {
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146 | switch (errno) {
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147 | case EACCES:
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148 | throw std::runtime_error("R12IntsAcc_Node0File::R12IntsAcc_Node0File -- access to the requested file is not allowed");
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149 | case ENOSPC:
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150 | throw std::runtime_error("R12IntsAcc_Node0File::R12IntsAcc_Node0File -- no space left in the filesystem");
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151 | case ENOENT:
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152 | throw std::runtime_error("R12IntsAcc_Node0File::R12IntsAcc_Node0File -- file does not exist");
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153 | case ENOTDIR:
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154 | throw std::runtime_error("R12IntsAcc_Node0File::R12IntsAcc_Node0File -- not a directory");
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155 | default:
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156 | perror(0);
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157 | throw std::runtime_error("R12IntsAcc_Node0File::R12IntsAcc_Node0File -- failed to open POSIX file on node 0");
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158 | }
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159 | }
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160 | }
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161 |
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162 | void
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163 | R12IntsAcc_Node0File::store_memorygrp(Ref<MemoryGrp>& mem, int ni, const size_t blksize)
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164 | {
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165 | if (committed_) {
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166 | ExEnv::out0() << "R12IntsAcc_Node0File::store_memorygrp(mem,ni) called after all data has been committed" << endl;
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167 | abort();
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168 | }
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169 | // mem must be the same as mem_
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170 | else if (mem_ != mem) {
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171 | ExEnv::out0() << "R12IntsAcc_MemoryGrp::store_memorygrp(mem,ni) called with invalid argument:" << endl <<
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172 | "mem != R12IntsAcc_MemoryGrp::mem_" << endl;
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173 | abort();
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174 | }
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175 | // Will store integrals on node 0
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176 | else if (taskid() != 0)
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177 | return;
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178 | else if (ni > ni_) {
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179 | ExEnv::out0() << "R12IntsAcc_Node0File::store_memorygrp(mem,ni) called with invalid argument:" << endl <<
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180 | "ni > R12IntsAcc_Node0File::ni_" << endl;
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181 | abort();
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182 | }
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183 | else if (next_orbital() + ni > ni_) {
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184 | ExEnv::out0() << "R12IntsAcc_Node0File::store_memorygrp(mem,ni) called with invalid argument:" << endl <<
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185 | "ni+next_orbital() > R12IntsAcc_Node0File::ni_" << endl;
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186 | abort();
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187 | }
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188 | else {
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189 | size_t blksize_memgrp = blksize;
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190 | if (blksize_memgrp == 0)
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191 | blksize_memgrp = blksize_;
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192 |
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193 | // Now do some extra work to figure layout of data in MemoryGrp
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194 | // Compute global offsets to each processor's data
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195 | int i,j,ij;
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196 | int me = taskid();
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197 | int nproc = mem->n();
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198 |
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199 | // Append the data to the file
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200 | datafile_ = open(filename_,O_WRONLY|O_APPEND,0644);
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201 | for (int i=0; i<ni; i++)
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202 | for (int j=0; j<nj_; j++) {
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203 | double *data;
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204 | int ij = ij_index(i,j);
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205 | int proc = ij%nproc;
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206 | int local_ij_index = ij/nproc;
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207 | if (proc != me) {
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208 | distsize_t moffset = (distsize_t)local_ij_index*blksize_memgrp*num_te_types() + mem->offset(proc);
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209 | for(int te_type=0; te_type < num_te_types(); te_type++) {
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210 | data = (double *) mem->obtain_readonly(moffset, blksize_);
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211 | ssize_t wrote_this_much = write(datafile_, data, blksize_);
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212 | if (wrote_this_much != blksize_)
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213 | throw FileOperationFailed("R12IntsAcc_Node0File::store_memorygrp() failed",
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214 | __FILE__,
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215 | __LINE__,
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216 | filename_,
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217 | FileOperationFailed::Write);
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218 | mem->release_readonly(data, moffset, blksize_);
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219 | moffset += blksize_memgrp;
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220 | }
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221 | }
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222 | else {
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223 | data = (double *) ((size_t)mem->localdata() + blksize_memgrp*num_te_types()*local_ij_index);
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224 | for(int te_type=0; te_type < num_te_types(); te_type++) {
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225 | ssize_t wrote_this_much = write(datafile_, data, blksize_);
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226 | if (wrote_this_much != blksize_)
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227 | throw FileOperationFailed("R12IntsAcc_Node0File::store_memorygrp() failed",
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228 | __FILE__,
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229 | __LINE__,
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230 | filename_,
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231 | FileOperationFailed::Write);
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232 | data = (double*) ((size_t) data + blksize_memgrp);
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233 | }
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234 | }
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235 | }
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236 | // Close the file and update the i counter
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237 | close(datafile_);
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238 | }
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239 |
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240 | inc_next_orbital(ni);
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241 | }
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242 |
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243 | void
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244 | R12IntsAcc_Node0File::store_pair_block(int i, int j, double *ints)
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245 | {
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246 | ExEnv::err0() << "R12IntsAcc_Node0File::store_pair_block() called: error" << endl;
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247 | abort();
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248 | }
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249 |
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250 | void
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251 | R12IntsAcc_Node0File::commit()
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252 | {
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253 | mem_->set_localsize(0);
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254 | mem_->sync();
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255 | mem_->deactivate();
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256 | R12IntsAcc::commit();
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257 | }
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258 |
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259 | void
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260 | R12IntsAcc_Node0File::activate()
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261 | {
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262 | R12IntsAcc::activate();
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263 | #if CREATE_FILE_ON_NODE0_ONLY
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264 | if (taskid() == 0)
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265 | #endif
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266 | datafile_ = open(filename_, O_RDONLY);
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267 | }
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268 |
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269 | void
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270 | R12IntsAcc_Node0File::deactivate()
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271 | {
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272 | mem_->activate();
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273 | #if CREATE_FILE_ON_NODE0_ONLY
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274 | if (taskid() == 0)
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275 | #endif
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276 | close(datafile_);
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277 | R12IntsAcc::deactivate();
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278 | }
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279 |
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280 | double *
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281 | R12IntsAcc_Node0File::retrieve_pair_block(int i, int j, tbint_type oper_type)
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282 | {
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283 | // Can retrieve blocks on node 0 only
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284 | if (is_avail(i,j)) {
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285 | int ij = ij_index(i,j);
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286 | struct PairBlkInfo *pb = &pairblk_[ij];
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287 | // Always first check if it's already in memory
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288 | if (pb->ints_[oper_type] == 0) {
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289 | off_t offset = pb->offset_ + (off_t)oper_type*blksize_;
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290 | off_t result_offset = lseek(datafile_,offset,SEEK_SET);
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291 | if (offset == (off_t)-1 || result_offset != offset)
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292 | throw FileOperationFailed("R12IntsAcc_Node0File::retrieve_pair_block() failed",
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293 | __FILE__,
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294 | __LINE__,
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295 | filename_,
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296 | FileOperationFailed::Other);
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297 | pb->ints_[oper_type] = new double[nxy_];
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298 | ssize_t read_this_much = read(datafile_,pb->ints_[oper_type],blksize_);
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299 | if (read_this_much != blksize_)
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300 | throw FileOperationFailed("R12IntsAcc_Node0File::retrieve_pair_block() failed",
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301 | __FILE__,
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302 | __LINE__,
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303 | filename_,
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304 | FileOperationFailed::Read);
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305 | }
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306 | pb->refcount_[oper_type] += 1;
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307 | return pb->ints_[oper_type];
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308 | }
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309 | else
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310 | throw std::runtime_error("R12IntsAcc_Node0File::retrieve_pair_block() called on node other than 0");
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311 |
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312 | return 0;
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313 | }
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314 |
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315 | void
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316 | R12IntsAcc_Node0File::release_pair_block(int i, int j, tbint_type oper_type)
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317 | {
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318 | if (is_avail(i,j)) {
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319 | int ij = ij_index(i,j);
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320 | struct PairBlkInfo *pb = &pairblk_[ij];
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321 | if (pb->refcount_[oper_type] <= 0) {
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322 | ExEnv::outn() << indent << taskid() << ":refcount=0: i = " << i << " j = " << j << " tbint_type = " << oper_type << endl;
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323 | throw std::runtime_error("Logic error: R12IntsAcc_Node0File::release_pair_block: refcount is already zero!");
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324 | }
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325 | if (pb->ints_[oper_type] != NULL && pb->refcount_[oper_type] == 1) {
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326 | delete[] pb->ints_[oper_type];
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327 | pb->ints_[oper_type] = NULL;
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328 | }
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329 | pb->refcount_[oper_type] -= 1;
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330 | }
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331 | }
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332 |
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333 |
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334 | // Local Variables:
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335 | // mode: c++
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336 | // c-file-style: "CLJ"
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337 | // End:
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