1 | //
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2 | // compute_ixjy.cc
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3 | //
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4 | // Copyright (C) 2004 Edward Valeev
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5 | //
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6 | // Author: Edward Valeev <edward.valeev@chemistry.gatech.edu>
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7 | // Maintainer: EV
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8 | //
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9 | // This file is part of the SC Toolkit.
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10 | //
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11 | // The SC Toolkit is free software; you can redistribute it and/or modify
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12 | // it under the terms of the GNU Library General Public License as published by
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13 | // the Free Software Foundation; either version 2, or (at your option)
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14 | // any later version.
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15 | //
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16 | // The SC Toolkit is distributed in the hope that it will be useful,
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17 | // but WITHOUT ANY WARRANTY; without even the implied warranty of
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18 | // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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19 | // GNU Library General Public License for more details.
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20 | //
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21 | // You should have received a copy of the GNU Library General Public License
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22 | // along with the SC Toolkit; see the file COPYING.LIB. If not, write to
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23 | // the Free Software Foundation, 675 Mass Ave, Cambridge, MA 02139, USA.
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24 | //
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25 | // The U.S. Government is granted a limited license as per AL 91-7.
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26 | //
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27 |
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28 | #include <stdexcept>
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29 | #include <stdlib.h>
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30 | #include <string.h>
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31 | #include <math.h>
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32 | #include <limits.h>
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33 |
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34 | #include <scconfig.h>
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35 | #include <util/misc/formio.h>
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36 | #include <util/misc/timer.h>
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37 | #include <util/class/class.h>
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38 | #include <util/state/state.h>
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39 | #include <util/state/state_text.h>
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40 | #include <util/state/state_bin.h>
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41 | #include <math/scmat/matrix.h>
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42 | #include <chemistry/qc/mbpt/bzerofast.h>
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43 | #include <chemistry/qc/mbptr12/transform_ixjy.h>
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44 | #include <chemistry/qc/mbptr12/blas.h>
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45 | #include <chemistry/qc/mbptr12/transform_13inds.h>
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46 |
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47 | using namespace std;
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48 | using namespace sc;
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49 |
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50 | #define SINGLE_THREAD_E13 0
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51 | #define PRINT2Q 0
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52 | #define PRINT3Q 0
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53 | #define PRINT4Q 0
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54 | #define PRINT_NUM_TE_TYPES 1
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55 | #define CHECK_INTS_SYMM 1
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56 |
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57 | /*-------------------------------------
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58 | Based on MBPT2::compute_mp2_energy()
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59 | -------------------------------------*/
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60 | void
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61 | TwoBodyMOIntsTransform_ixjy::compute()
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62 | {
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63 | init_acc();
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64 | if (ints_acc_->is_committed())
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65 | return;
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66 |
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67 | Ref<Integral> integral = factory_->integral();
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68 | Ref<GaussianBasisSet> bs1 = space1_->basis();
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69 | Ref<GaussianBasisSet> bs2 = space2_->basis();
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70 | Ref<GaussianBasisSet> bs3 = space3_->basis();
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71 | Ref<GaussianBasisSet> bs4 = space4_->basis();
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72 | int rank1 = space1_->rank();
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73 | int rank2 = space2_->rank();
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74 | int rank3 = space3_->rank();
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75 | int rank4 = space4_->rank();
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76 | int nbasis1 = bs1->nbasis();
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77 | int nbasis2 = bs2->nbasis();
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78 | int nbasis3 = bs3->nbasis();
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79 | int nbasis4 = bs4->nbasis();
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80 | int nshell1 = bs1->nshell();
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81 | int nshell2 = bs2->nshell();
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82 | int nshell3 = bs3->nshell();
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83 | int nshell4 = bs4->nshell();
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84 | int nfuncmax1 = bs1->max_nfunction_in_shell();
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85 | int nfuncmax2 = bs2->max_nfunction_in_shell();
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86 | int nfuncmax3 = bs3->max_nfunction_in_shell();
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87 | int nfuncmax4 = bs4->max_nfunction_in_shell();
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88 | enum te_types {eri=0, r12=1, r12t1=2};
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89 | const size_t memgrp_blocksize = memgrp_blksize();
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90 |
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91 | // log2 of the erep tolerance
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92 | // (erep < 2^tol => discard)
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93 | const int tol = (int) (-10.0/log10(2.0)); // discard ints smaller than 10^-20
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94 |
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95 | int aoint_computed = 0;
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96 |
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97 | std::string tim_label("tbint_tform_ikjy ");
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98 | tim_label += name_;
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99 | tim_enter(tim_label.c_str());
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100 |
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101 | print_header();
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102 |
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103 | // Compute the storage remaining for the integral routines
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104 | size_t dyn_mem = distsize_to_size(compute_transform_dynamic_memory_(batchsize_));
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105 |
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106 | int me = msg_->me();
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107 | int nproc = msg_->n();
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108 | const int restart_orb = restart_orbital();
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109 | int nijmax = compute_nij(batchsize_,rank3,nproc,me);
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110 |
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111 | vector<int> mosym1 = space1_->mosym();
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112 | vector<int> mosym2 = space2_->mosym();
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113 | vector<int> mosym3 = space3_->mosym();
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114 | vector<int> mosym4 = space4_->mosym();
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115 | double** vector2 = new double*[nbasis2];
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116 | double** vector4 = new double*[nbasis4];
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117 | vector2[0] = new double[rank2*nbasis2];
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118 | vector4[0] = new double[rank4*nbasis4];
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119 | for(int i=1; i<nbasis2; i++) vector2[i] = vector2[i-1] + rank2;
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120 | for(int i=1; i<nbasis4; i++) vector4[i] = vector4[i-1] + rank4;
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121 | space2_->coefs().convert(vector2);
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122 | space4_->coefs().convert(vector4);
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123 |
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124 | /////////////////////////////////////
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125 | // Begin transformation loops
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126 | /////////////////////////////////////
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127 |
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128 | // debug print
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129 | if (debug_ >= 2) {
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130 | ExEnv::outn() << indent
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131 | << scprintf("node %i, begin loop over i-batches",me) << endl;
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132 | }
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133 | // end of debug print
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134 |
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135 | // Initialize the integrals
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136 | integral->set_storage(memory_ - dyn_mem);
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137 | integral->set_basis(space1_->basis(),space2_->basis(),space3_->basis(),space4_->basis());
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138 | Ref<TwoBodyInt>* tbints = new Ref<TwoBodyInt>[thr_->nthread()];
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139 | for (int i=0; i<thr_->nthread(); i++) {
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140 | tbints[i] = integral->grt();
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141 | }
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142 | if (debug_ >= 1)
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143 | ExEnv::out0() << indent << scprintf("Memory used for integral storage: %i Bytes",
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144 | integral->storage_used()) << endl;
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145 |
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146 | Ref<ThreadLock> lock = thr_->new_lock();
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147 | TwoBodyMOIntsTransform_13Inds** e13thread = new TwoBodyMOIntsTransform_13Inds*[thr_->nthread()];
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148 | for (int i=0; i<thr_->nthread(); i++) {
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149 | e13thread[i] = new TwoBodyMOIntsTransform_13Inds(this,i,thr_->nthread(),lock,tbints[i],-100.0,debug_);
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150 | }
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151 |
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152 | /*-----------------------------------
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153 |
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154 | Start the integrals transformation
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155 |
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156 | -----------------------------------*/
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157 | tim_enter("mp2-r12/a passes");
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158 | if (me == 0 && top_mole_.nonnull() && top_mole_->if_to_checkpoint() && ints_acc_->can_restart()) {
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159 | StateOutBin stateout(top_mole_->checkpoint_file());
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160 | SavableState::save_state(top_mole_,stateout);
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161 | ExEnv::out0() << indent << "Checkpointed the wave function" << endl;
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162 | }
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163 |
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164 | for (int pass=0; pass<npass_; pass++) {
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165 |
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166 | ExEnv::out0() << indent << "Beginning pass " << pass+1 << endl;
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167 |
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168 | int ni = batchsize_;
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169 | int i_offset = restart_orb + pass*ni;
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170 | if (pass == npass_ - 1)
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171 | ni = rank1 - batchsize_*(npass_-1);
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172 |
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173 | // Compute number of of i,j pairs on each node during current pass for
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174 | // two-el integrals
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175 | int nij = compute_nij(ni,rank3,nproc,me);
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176 |
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177 | // debug print
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178 | if (debug_)
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179 | ExEnv::outn() << indent << "node " << me << ", nij = " << nij << endl;
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180 | // end of debug print
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181 |
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182 | // Allocate and initialize some arrays
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183 | // (done here to avoid having these arrays
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184 | // overlap with arrays allocated later)
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185 |
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186 | // Allocate (and initialize) some arrays
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187 |
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188 | double* integral_ijsq = (double*) mem_->localdata();
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189 | //bzerofast(integral_ijsx, (num_te_types_*nij*memgrp_blocksize/sizeof(double)));
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190 | memset(integral_ijsq, 0, num_te_types_*nij*memgrp_blocksize);
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191 | integral_ijsq = 0;
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192 | mem_->sync();
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193 | ExEnv::out0() << indent
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194 | << scprintf("Begin loop over shells (ints, 1+2 q.t.)") << endl;
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195 |
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196 | // Do the two electron integrals and the first two quarter transformations
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197 | tim_enter("ints+1qt+2qt");
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198 | shell_pair_data()->init();
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199 | for (int i=0; i<thr_->nthread(); i++) {
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200 | e13thread[i]->set_i_offset(i_offset);
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201 | e13thread[i]->set_ni(ni);
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202 | thr_->add_thread(i,e13thread[i]);
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203 | # if SINGLE_THREAD_E13
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204 | e13thread[i]->run();
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205 | # endif
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206 | }
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207 | # if !SINGLE_THREAD_E13
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208 | thr_->start_threads();
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209 | thr_->wait_threads();
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210 | # endif
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211 | tim_exit("ints+1qt+2qt");
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212 | ExEnv::out0() << indent << "End of loop over shells" << endl;
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213 |
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214 | mem_->sync(); // Make sure ijsq is complete on each node before continuing
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215 | integral_ijsq = (double*) mem_->localdata();
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216 |
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217 | #if PRINT2Q
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218 | {
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219 | for(int te_type=0; te_type<PRINT_NUM_TE_TYPES; te_type++) {
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220 | for (int i = 0; i<ni; i++) {
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221 | for (int q = 0; q<nbasis2; q++) {
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222 | for (int j = 0; j<rank3; j++) {
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223 | int ij = i*rank3+j;
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224 | int ij_local = ij/nproc;
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225 | if (ij%nproc == me) {
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226 | const double* ijsq_ints = (const double*) ((size_t)integral_ijsq + (ij_local*num_te_types_+te_type)*memgrp_blocksize);
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227 | for (int s = 0; s<nbasis4; s++) {
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228 | double value = ijsq_ints[s*rank2+q];
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229 | printf("2Q: type = %d (%d %d|%d %d) = %12.8f\n",
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230 | te_type,i+i_offset,q,j,s,value);
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231 | }
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232 | }
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233 | }
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234 | }
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235 | }
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236 | }
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237 | }
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238 | #endif
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239 |
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240 | // Third quarter transform
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241 | ExEnv::out0() << indent << "Begin third q.t." << endl;
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242 | tim_enter("3. q.t.");
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243 | // Begin third quarter transformation;
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244 | // from (iq|js) stored as ijsq
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245 | // generate (ix|js) stored as ijsx
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246 |
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247 | const int sx_size = nbasis4 * rank2 * sizeof(double);
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248 | double* sx_ints = new double[nbasis4 * rank2];
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249 | for (int i = 0; i<ni; i++) {
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250 | for (int j = 0; j<rank3; j++) {
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251 | int ij = i*rank3+j;
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252 | int ij_local = ij/nproc;
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253 | if (ij%nproc == me) {
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254 |
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255 | for(int te_type=0; te_type<num_te_types_; te_type++) {
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256 |
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257 | const double *sq_ptr = (const double*) ((size_t)integral_ijsq + (ij_local*num_te_types_+te_type)*memgrp_blocksize);
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258 |
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259 | // fourth quarter transform
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260 | // sx = sq * qx
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261 | const char notransp = 'n';
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262 | const double one = 1.0;
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263 | const double zero = 0.0;
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264 | F77_DGEMM(¬ransp,¬ransp,&rank2,&nbasis4,&nbasis2,&one,vector2[0],&rank2,
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265 | sq_ptr,&nbasis2,&zero,sx_ints,&rank2);
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266 |
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267 | // copy the result back to integrals_ijsq
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268 | memcpy((void*)sq_ptr,(const void*)sx_ints,sx_size);
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269 | }
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270 | }
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271 | }
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272 | }
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273 | delete[] sx_ints;
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274 | tim_exit("3. q.t.");
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275 | ExEnv::out0() << indent << "End of third q.t." << endl;
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276 | integral_ijsq = 0;
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277 |
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278 | double* integral_ijsx = (double*) mem_->localdata();
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279 | #if PRINT3Q
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280 | {
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281 | for(int te_type=0; te_type<PRINT_NUM_TE_TYPES; te_type++) {
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282 | for (int i = 0; i<ni; i++) {
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283 | for (int x = 0; x<rank2; x++) {
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284 | for (int j = 0; j<rank3; j++) {
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285 | int ij = i*rank3+j;
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286 | int ij_local = ij/nproc;
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287 | if (ij%nproc == me) {
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288 | const double* ijsx_ints = (const double*) ((size_t)integral_ijsx + (ij_local*num_te_types_+te_type)*memgrp_blocksize);
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289 | for (int s = 0; s<nbasis4; s++) {
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290 | double value = ijsx_ints[s*rank2+x];
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291 | printf("3Q: type = %d (%d %d|%d %d) = %12.8f\n",
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292 | te_type,i+i_offset,x,j,s,value);
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293 | }
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294 | }
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295 | }
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296 | }
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297 | }
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298 | }
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299 | }
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300 | #endif
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301 |
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302 | // Fourth quarter transform
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303 | ExEnv::out0() << indent << "Begin fourth q.t." << endl;
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304 | tim_enter("4. q.t.");
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305 | // Begin fourth quarter transformation;
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306 | // generate (ix|jy) stored as ijxy
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307 |
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308 | double* ijxy_ints = new double[rank2*rank4];
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309 | const size_t xy_size = rank2*rank4*sizeof(double);
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310 | for(int te_type=0; te_type<num_te_types_; te_type++) {
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311 |
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312 | for (int i = 0; i<ni; i++) {
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313 | for (int j = 0; j<rank3; j++) {
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314 | int ij = i*rank3+j;
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315 | int ij_local = ij/nproc;
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316 | if (ij%nproc == me) {
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317 |
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318 | const double *sx_ptr = (const double*) ((size_t)integral_ijsx + (ij_local*num_te_types_+te_type)*memgrp_blocksize);
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319 |
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320 | // fourth quarter transform
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321 | // xy = sx^t * sy
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322 | const char notransp = 'n';
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323 | const char transp = 't';
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324 | const double one = 1.0;
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325 | const double zero = 0.0;
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326 | F77_DGEMM(¬ransp,&transp,&rank4,&rank2,&nbasis4,&one,vector4[0],&rank4,
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327 | sx_ptr,&rank2,&zero,ijxy_ints,&rank4);
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328 |
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329 | // copy the result back to integrals_ijsx
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330 | memcpy((void*)sx_ptr,(const void*)ijxy_ints,xy_size);
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331 | }
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332 | }
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333 | }
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334 | }
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335 | delete[] ijxy_ints;
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336 | tim_exit("4. q.t.");
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337 | ExEnv::out0() << indent << "End of fourth q.t." << endl;
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338 |
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339 | integral_ijsx = 0;
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340 | double* integral_ijxy = (double*) mem_->localdata();
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341 |
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342 | // Zero out nonsymmetric integrals -- Pitzer theorem in action
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343 | {
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344 | for (int i = 0; i<ni; i++) {
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345 | for (int j = 0; j<rank3; j++) {
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346 | int ij = i*rank3+j;
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347 | int ij_local = ij/nproc;
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348 | if (ij%nproc == me) {
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349 | const int ij_sym = mosym1[i+i_offset] ^ mosym3[j];
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350 | for(int te_type=0; te_type<num_te_types_; te_type++) {
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351 | double* ijxy_ptr = (double*) ((size_t)integral_ijxy + (ij_local*num_te_types_+te_type)*memgrp_blocksize);
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352 | for (int x = 0; x<rank2; x++) {
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353 | const int ijx_sym = ij_sym ^ mosym2[x];
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354 | for (int y = 0; y<rank4; y++, ijxy_ptr++) {
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355 | if (ijx_sym ^ mosym4[y]) {
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356 | *ijxy_ptr = 0.0;
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357 | }
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358 | }
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359 | }
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360 | }
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361 | }
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362 | }
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363 | }
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364 | }
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365 | // Sync up tasks before integrals are committed
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366 | mem_->sync();
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367 |
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368 | #if PRINT4Q
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369 | {
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370 | for(int te_type=0; te_type<PRINT_NUM_TE_TYPES; te_type++) {
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371 | for (int i = 0; i<ni; i++) {
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372 | for (int x = 0; x<rank2; x++) {
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373 | for (int j = 0; j<rank3; j++) {
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374 | int ij = i*rank3+j;
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375 | int ij_local = ij/nproc;
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376 | if (ij%nproc == me) {
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377 | const double* ijxy_ints = (const double*)((size_t)integral_ijxy + (ij_local*num_te_types_+te_type)*memgrp_blocksize);
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378 | for (int y = 0; y<rank4; y++) {
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379 | double value = ijxy_ints[x*rank4+y];
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380 | printf("4Q: type = %d (%d %d|%d %d) = %12.8f\n",
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381 | te_type,i+i_offset,x,j,y,value);
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382 | }
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383 | }
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384 | }
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385 | }
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386 | }
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387 | }
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388 | }
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389 | #endif
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390 |
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391 | // Push locally stored integrals to an accumulator
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392 | // This could involve storing the data to disk or simply remembering the pointer
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393 | tim_enter("MO ints store");
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394 | ints_acc_->store_memorygrp(mem_,ni,memgrp_blocksize);
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395 | tim_exit("MO ints store");
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396 | mem_->sync();
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397 |
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398 | if (me == 0 && top_mole_.nonnull() && top_mole_->if_to_checkpoint() && ints_acc_->can_restart()) {
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399 | StateOutBin stateout(top_mole_->checkpoint_file());
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400 | SavableState::save_state(top_mole_,stateout);
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401 | ExEnv::out0() << indent << "Checkpointed the wave function" << endl;
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402 | }
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403 |
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404 | } // end of loop over passes
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405 | tim_exit("mp2-r12/a passes");
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406 | if (debug_)
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407 | ExEnv::out0() << indent << "End of mp2-r12/a transformation" << endl;
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408 | // Done storing integrals - commit the content
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409 | // WARNING: it is not safe to use mem until deactivate has been called on the accumulator
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410 | // After that deactivate the size of mem will be 0 [mem->set_localsize(0)]
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411 | ints_acc_->commit();
|
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412 |
|
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413 |
|
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414 | for (int i=0; i<thr_->nthread(); i++) {
|
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415 | delete e13thread[i];
|
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416 | }
|
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417 | delete[] e13thread;
|
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418 | delete[] tbints; tbints = 0;
|
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419 | delete[] vector2[0]; delete[] vector2;
|
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420 | delete[] vector4[0]; delete[] vector4;
|
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421 |
|
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422 | tim_exit(tim_label.c_str());
|
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423 |
|
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424 | if (me == 0 && top_mole_.nonnull() && top_mole_->if_to_checkpoint()) {
|
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425 | StateOutBin stateout(top_mole_->checkpoint_file());
|
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426 | SavableState::save_state(top_mole_,stateout);
|
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427 | ExEnv::out0() << indent << "Checkpointed the wave function" << endl;
|
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428 | }
|
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429 |
|
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430 | print_footer();
|
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431 |
|
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432 | #if CHECK_INTS_SYMM
|
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433 | ExEnv::out0() << indent << "Detecting non-totally-symmetric integrals ... ";
|
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434 | check_int_symm();
|
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435 | ExEnv::out0() << "none" << endl;
|
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436 | #endif
|
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437 |
|
---|
438 | }
|
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439 |
|
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440 |
|
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441 | ////////////////////////////////////////////////////////////////////////////
|
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442 |
|
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443 | // Local Variables:
|
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444 | // mode: c++
|
---|
445 | // c-file-style: "CLJ-CONDENSED"
|
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446 | // End:
|
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