1 | //
|
---|
2 | // clks.cc --- implementation of the closed shell Kohn-Sham SCF class
|
---|
3 | //
|
---|
4 | // Copyright (C) 1997 Limit Point Systems, Inc.
|
---|
5 | //
|
---|
6 | // Author: Edward Seidl <seidl@janed.com>
|
---|
7 | // Maintainer: LPS
|
---|
8 | //
|
---|
9 | // This file is part of the SC Toolkit.
|
---|
10 | //
|
---|
11 | // The SC Toolkit is free software; you can redistribute it and/or modify
|
---|
12 | // it under the terms of the GNU Library General Public License as published by
|
---|
13 | // the Free Software Foundation; either version 2, or (at your option)
|
---|
14 | // any later version.
|
---|
15 | //
|
---|
16 | // The SC Toolkit is distributed in the hope that it will be useful,
|
---|
17 | // but WITHOUT ANY WARRANTY; without even the implied warranty of
|
---|
18 | // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
|
---|
19 | // GNU Library General Public License for more details.
|
---|
20 | //
|
---|
21 | // You should have received a copy of the GNU Library General Public License
|
---|
22 | // along with the SC Toolkit; see the file COPYING.LIB. If not, write to
|
---|
23 | // the Free Software Foundation, 675 Mass Ave, Cambridge, MA 02139, USA.
|
---|
24 | //
|
---|
25 | // The U.S. Government is granted a limited license as per AL 91-7.
|
---|
26 | //
|
---|
27 |
|
---|
28 | #ifdef __GNUC__
|
---|
29 | #pragma implementation
|
---|
30 | #endif
|
---|
31 |
|
---|
32 | #include <math.h>
|
---|
33 |
|
---|
34 | #include <util/misc/timer.h>
|
---|
35 | #include <util/misc/formio.h>
|
---|
36 | #include <util/state/stateio.h>
|
---|
37 |
|
---|
38 | #include <math/optimize/scextrapmat.h>
|
---|
39 |
|
---|
40 | #include <chemistry/qc/basis/petite.h>
|
---|
41 |
|
---|
42 | #include <chemistry/qc/dft/clks.h>
|
---|
43 | #include <chemistry/qc/scf/lgbuild.h>
|
---|
44 | #include <chemistry/qc/scf/ltbgrad.h>
|
---|
45 |
|
---|
46 | #include <chemistry/qc/dft/clkstmpl.h>
|
---|
47 |
|
---|
48 | using namespace std;
|
---|
49 | using namespace sc;
|
---|
50 |
|
---|
51 | ///////////////////////////////////////////////////////////////////////////
|
---|
52 | // CLKS
|
---|
53 |
|
---|
54 | static ClassDesc CLKS_cd(
|
---|
55 | typeid(CLKS),"CLKS",1,"public CLSCF",
|
---|
56 | 0, create<CLKS>, create<CLKS>);
|
---|
57 |
|
---|
58 | CLKS::CLKS(StateIn& s) :
|
---|
59 | SavableState(s),
|
---|
60 | CLSCF(s)
|
---|
61 | {
|
---|
62 | exc_=0;
|
---|
63 | integrator_ << SavableState::restore_state(s);
|
---|
64 | functional_ << SavableState::restore_state(s);
|
---|
65 | vxc_ = basis_matrixkit()->symmmatrix(so_dimension());
|
---|
66 | vxc_.restore(s);
|
---|
67 | }
|
---|
68 |
|
---|
69 | CLKS::CLKS(const Ref<KeyVal>& keyval) :
|
---|
70 | CLSCF(keyval)
|
---|
71 | {
|
---|
72 | exc_=0;
|
---|
73 | integrator_ << keyval->describedclassvalue("integrator");
|
---|
74 | if (integrator_.null()) integrator_ = new RadialAngularIntegrator();
|
---|
75 |
|
---|
76 | functional_ << keyval->describedclassvalue("functional");
|
---|
77 | if (functional_.null()) {
|
---|
78 | ExEnv::outn() << "ERROR: " << class_name() << ": no \"functional\" given" << endl;
|
---|
79 | abort();
|
---|
80 | }
|
---|
81 | }
|
---|
82 |
|
---|
83 | CLKS::~CLKS()
|
---|
84 | {
|
---|
85 | }
|
---|
86 |
|
---|
87 | void
|
---|
88 | CLKS::save_data_state(StateOut& s)
|
---|
89 | {
|
---|
90 | CLSCF::save_data_state(s);
|
---|
91 | SavableState::save_state(integrator_.pointer(),s);
|
---|
92 | SavableState::save_state(functional_.pointer(),s);
|
---|
93 | vxc_.save(s);
|
---|
94 | }
|
---|
95 |
|
---|
96 | int
|
---|
97 | CLKS::value_implemented() const
|
---|
98 | {
|
---|
99 | return 1;
|
---|
100 | }
|
---|
101 |
|
---|
102 | int
|
---|
103 | CLKS::gradient_implemented() const
|
---|
104 | {
|
---|
105 | return 1;
|
---|
106 | }
|
---|
107 |
|
---|
108 | void
|
---|
109 | CLKS::print(ostream&o) const
|
---|
110 | {
|
---|
111 | o << indent << "Closed Shell Kohn-Sham (CLKS) Parameters:" << endl;
|
---|
112 | o << incindent;
|
---|
113 | CLSCF::print(o);
|
---|
114 | o << indent << "Functional:" << endl;
|
---|
115 | o << incindent;
|
---|
116 | functional_->print(o);
|
---|
117 | o << decindent;
|
---|
118 | o << indent << "Integrator:" << endl;
|
---|
119 | o << incindent;
|
---|
120 | integrator_->print(o);
|
---|
121 | o << decindent;
|
---|
122 | o << decindent;
|
---|
123 | }
|
---|
124 |
|
---|
125 | RefSymmSCMatrix
|
---|
126 | CLKS::density()
|
---|
127 | {
|
---|
128 | RefSymmSCMatrix dens(so_dimension(), basis_matrixkit());
|
---|
129 | so_density(dens, 2.0);
|
---|
130 | dens.scale(2.0);
|
---|
131 | return dens;
|
---|
132 | }
|
---|
133 |
|
---|
134 | double
|
---|
135 | CLKS::scf_energy()
|
---|
136 | {
|
---|
137 | double ehf = CLSCF::scf_energy();
|
---|
138 | return ehf+exc_;
|
---|
139 | }
|
---|
140 |
|
---|
141 | RefSymmSCMatrix
|
---|
142 | CLKS::effective_fock()
|
---|
143 | {
|
---|
144 | RefSymmSCMatrix fa = fock(0) + vxc_;
|
---|
145 |
|
---|
146 | RefSymmSCMatrix mofock(oso_dimension(), basis_matrixkit());
|
---|
147 | mofock.assign(0.0);
|
---|
148 |
|
---|
149 | // use eigenvectors if scf_vector_ is null
|
---|
150 | if (oso_scf_vector_.null())
|
---|
151 | mofock.accumulate_transform(eigenvectors(), fa,
|
---|
152 | SCMatrix::TransposeTransform);
|
---|
153 | else
|
---|
154 | mofock.accumulate_transform(so_to_orthog_so().t() * oso_scf_vector_, fa,
|
---|
155 | SCMatrix::TransposeTransform);
|
---|
156 |
|
---|
157 | return mofock;
|
---|
158 | }
|
---|
159 |
|
---|
160 | Ref<SCExtrapData>
|
---|
161 | CLKS::extrap_data()
|
---|
162 | {
|
---|
163 | Ref<SCExtrapData> data =
|
---|
164 | new SymmSCMatrix2SCExtrapData(cl_fock_.result_noupdate(), vxc_);
|
---|
165 | return data;
|
---|
166 | }
|
---|
167 |
|
---|
168 | //////////////////////////////////////////////////////////////////////////////
|
---|
169 |
|
---|
170 | void
|
---|
171 | CLKS::ao_fock(double accuracy)
|
---|
172 | {
|
---|
173 | Ref<PetiteList> pl = integral()->petite_list(basis());
|
---|
174 |
|
---|
175 | // calculate G. First transform cl_dens_diff_ to the AO basis, then
|
---|
176 | // scale the off-diagonal elements by 2.0
|
---|
177 | tim_enter("setup");
|
---|
178 | RefSymmSCMatrix dd = cl_dens_diff_;
|
---|
179 | cl_dens_diff_ = pl->to_AO_basis(dd);
|
---|
180 | cl_dens_diff_->scale(2.0);
|
---|
181 | cl_dens_diff_->scale_diagonal(0.5);
|
---|
182 | tim_exit("setup");
|
---|
183 |
|
---|
184 | // now try to figure out the matrix specialization we're dealing with
|
---|
185 | // if we're using Local matrices, then there's just one subblock, or
|
---|
186 | // see if we can convert G and P to local matrices
|
---|
187 |
|
---|
188 | if (local_ || local_dens_) {
|
---|
189 | // grab the data pointers from the G and P matrices
|
---|
190 | double *gmat, *pmat;
|
---|
191 | tim_enter("local data");
|
---|
192 | RefSymmSCMatrix gtmp = get_local_data(cl_gmat_, gmat, SCF::Accum);
|
---|
193 | RefSymmSCMatrix ptmp = get_local_data(cl_dens_diff_, pmat, SCF::Read);
|
---|
194 | tim_exit("local data");
|
---|
195 |
|
---|
196 | tim_enter("init pmax");
|
---|
197 | signed char * pmax = init_pmax(pmat);
|
---|
198 | tim_exit("init pmax");
|
---|
199 |
|
---|
200 | // LocalCLKSContribution lclc(gmat, pmat, functional_->a0());
|
---|
201 | // LocalGBuild<LocalCLKSContribution>
|
---|
202 | // gb(lclc, tbi_, pl, basis(), scf_grp_, pmax, desired_value_accuracy()/100.0);
|
---|
203 | // gb.run();
|
---|
204 | int i;
|
---|
205 | int nthread = threadgrp_->nthread();
|
---|
206 | LocalGBuild<LocalCLKSContribution> **gblds =
|
---|
207 | new LocalGBuild<LocalCLKSContribution>*[nthread];
|
---|
208 | LocalCLKSContribution **conts = new LocalCLKSContribution*[nthread];
|
---|
209 |
|
---|
210 | double **gmats = new double*[nthread];
|
---|
211 | gmats[0] = gmat;
|
---|
212 |
|
---|
213 | Ref<GaussianBasisSet> bs = basis();
|
---|
214 | int ntri = i_offset(bs->nbasis());
|
---|
215 |
|
---|
216 | double gmat_accuracy = accuracy;
|
---|
217 | if (min_orthog_res() < 1.0) { gmat_accuracy *= min_orthog_res(); }
|
---|
218 |
|
---|
219 | for (i=0; i < nthread; i++) {
|
---|
220 | if (i) {
|
---|
221 | gmats[i] = new double[ntri];
|
---|
222 | memset(gmats[i], 0, sizeof(double)*ntri);
|
---|
223 | }
|
---|
224 | conts[i] = new LocalCLKSContribution(gmats[i], pmat, functional_->a0());
|
---|
225 | gblds[i] = new LocalGBuild<LocalCLKSContribution>(*conts[i], tbis_[i],
|
---|
226 | pl, bs, scf_grp_, pmax, gmat_accuracy, nthread, i
|
---|
227 | );
|
---|
228 |
|
---|
229 | threadgrp_->add_thread(i, gblds[i]);
|
---|
230 | }
|
---|
231 |
|
---|
232 | tim_enter("start thread");
|
---|
233 | if (threadgrp_->start_threads() < 0) {
|
---|
234 | ExEnv::err0() << indent
|
---|
235 | << "CLKS: error starting threads" << endl;
|
---|
236 | abort();
|
---|
237 | }
|
---|
238 | tim_exit("start thread");
|
---|
239 |
|
---|
240 | tim_enter("stop thread");
|
---|
241 | if (threadgrp_->wait_threads() < 0) {
|
---|
242 | ExEnv::err0() << indent
|
---|
243 | << "CLKS: error waiting for threads" << endl;
|
---|
244 | abort();
|
---|
245 | }
|
---|
246 | tim_exit("stop thread");
|
---|
247 |
|
---|
248 | double tnint=0;
|
---|
249 | for (i=0; i < nthread; i++) {
|
---|
250 | tnint += gblds[i]->tnint;
|
---|
251 |
|
---|
252 | if (i) {
|
---|
253 | for (int j=0; j < ntri; j++)
|
---|
254 | gmat[j] += gmats[i][j];
|
---|
255 | delete[] gmats[i];
|
---|
256 | }
|
---|
257 | delete gblds[i];
|
---|
258 | delete conts[i];
|
---|
259 | }
|
---|
260 |
|
---|
261 | delete[] gmats;
|
---|
262 | delete[] gblds;
|
---|
263 | delete[] conts;
|
---|
264 |
|
---|
265 | delete[] pmax;
|
---|
266 |
|
---|
267 | scf_grp_->sum(&tnint, 1, 0, 0);
|
---|
268 | ExEnv::out0() << indent << scprintf("%20.0f integrals\n", tnint);
|
---|
269 |
|
---|
270 | // if we're running on multiple processors, then sum the G matrix
|
---|
271 | tim_enter("sum");
|
---|
272 | if (scf_grp_->n() > 1)
|
---|
273 | scf_grp_->sum(gmat, i_offset(basis()->nbasis()));
|
---|
274 | tim_exit("sum");
|
---|
275 |
|
---|
276 | // if we're running on multiple processors, or we don't have local
|
---|
277 | // matrices, then accumulate gtmp back into G
|
---|
278 | tim_enter("accum");
|
---|
279 | if (!local_ || scf_grp_->n() > 1)
|
---|
280 | cl_gmat_->convert_accumulate(gtmp);
|
---|
281 | tim_exit("accum");
|
---|
282 | }
|
---|
283 |
|
---|
284 | // for now quit
|
---|
285 | else {
|
---|
286 | ExEnv::out0() << indent << "Cannot yet use anything but Local matrices\n";
|
---|
287 | abort();
|
---|
288 | }
|
---|
289 |
|
---|
290 | cl_dens_diff_ = pl->to_AO_basis(cl_dens_);
|
---|
291 | cl_dens_diff_.scale(0.5);
|
---|
292 | integrator_->set_compute_potential_integrals(1);
|
---|
293 | integrator_->set_accuracy(accuracy);
|
---|
294 | integrator_->integrate(functional_, cl_dens_diff_, cl_dens_diff_);
|
---|
295 | exc_ = integrator_->value();
|
---|
296 | RefSymmSCMatrix vxa = cl_gmat_.clone();
|
---|
297 | vxa->assign((double*)integrator_->alpha_vmat());
|
---|
298 | vxa = pl->to_SO_basis(vxa);
|
---|
299 | vxc_ = vxa;
|
---|
300 |
|
---|
301 | tim_enter("symm");
|
---|
302 | // get rid of AO delta P
|
---|
303 | cl_dens_diff_ = dd;
|
---|
304 | dd = cl_dens_diff_.clone();
|
---|
305 |
|
---|
306 | // now symmetrize the skeleton G matrix, placing the result in dd
|
---|
307 | RefSymmSCMatrix skel_gmat = cl_gmat_.copy();
|
---|
308 | skel_gmat.scale(1.0/(double)pl->order());
|
---|
309 | pl->symmetrize(skel_gmat,dd);
|
---|
310 | tim_exit("symm");
|
---|
311 |
|
---|
312 |
|
---|
313 | // F = H+G
|
---|
314 | cl_fock_.result_noupdate().assign(hcore_);
|
---|
315 | cl_fock_.result_noupdate().accumulate(dd);
|
---|
316 | accumddh_->accum(cl_fock_.result_noupdate());
|
---|
317 | cl_fock_.computed()=1;
|
---|
318 | }
|
---|
319 |
|
---|
320 | /////////////////////////////////////////////////////////////////////////////
|
---|
321 |
|
---|
322 | void
|
---|
323 | CLKS::two_body_energy(double &ec, double &ex)
|
---|
324 | {
|
---|
325 | tim_enter("clks e2");
|
---|
326 | ec = 0.0;
|
---|
327 | ex = 0.0;
|
---|
328 |
|
---|
329 | if (local_ || local_dens_) {
|
---|
330 | // grab the data pointers from the G and P matrices
|
---|
331 | double *pmat;
|
---|
332 | tim_enter("local data");
|
---|
333 | RefSymmSCMatrix dens = ao_density();
|
---|
334 | dens->scale(2.0);
|
---|
335 | dens->scale_diagonal(0.5);
|
---|
336 | RefSymmSCMatrix ptmp = get_local_data(dens, pmat, SCF::Read);
|
---|
337 | tim_exit("local data");
|
---|
338 |
|
---|
339 | // initialize the two electron integral classes
|
---|
340 | Ref<TwoBodyInt> tbi = integral()->electron_repulsion();
|
---|
341 | tbi->set_integral_storage(0);
|
---|
342 |
|
---|
343 | tim_enter("init pmax");
|
---|
344 | signed char * pmax = init_pmax(pmat);
|
---|
345 | tim_exit("init pmax");
|
---|
346 |
|
---|
347 | LocalCLKSEnergyContribution lclc(pmat, functional_->a0());
|
---|
348 | Ref<PetiteList> pl = integral()->petite_list();
|
---|
349 | LocalGBuild<LocalCLKSEnergyContribution>
|
---|
350 | gb(lclc, tbi, pl, basis(), scf_grp_, pmax,
|
---|
351 | desired_value_accuracy()/100.0);
|
---|
352 | gb.run();
|
---|
353 |
|
---|
354 | delete[] pmax;
|
---|
355 |
|
---|
356 | ec = lclc.ec;
|
---|
357 | ex = lclc.ex;
|
---|
358 | }
|
---|
359 | else {
|
---|
360 | ExEnv::out0() << indent << "Cannot yet use anything but Local matrices\n";
|
---|
361 | abort();
|
---|
362 | }
|
---|
363 | tim_exit("clks e2");
|
---|
364 | }
|
---|
365 |
|
---|
366 | /////////////////////////////////////////////////////////////////////////////
|
---|
367 |
|
---|
368 | void
|
---|
369 | CLKS::two_body_deriv(double * tbgrad)
|
---|
370 | {
|
---|
371 | tim_enter("grad");
|
---|
372 |
|
---|
373 | int natom3 = 3*molecule()->natom();
|
---|
374 |
|
---|
375 | tim_enter("two-body");
|
---|
376 | double *hfgrad = new double[natom3];
|
---|
377 | memset(hfgrad,0,sizeof(double)*natom3);
|
---|
378 | two_body_deriv_hf(hfgrad,functional_->a0());
|
---|
379 | //print_natom_3(hfgrad, "Two-body contribution to DFT gradient");
|
---|
380 | tim_exit("two-body");
|
---|
381 |
|
---|
382 | double *dftgrad = new double[natom3];
|
---|
383 | memset(dftgrad,0,sizeof(double)*natom3);
|
---|
384 | Ref<PetiteList> pl = integral()->petite_list(basis());
|
---|
385 | RefSymmSCMatrix aodens = gradient_density();
|
---|
386 | aodens.scale(0.5);
|
---|
387 | integrator_->set_compute_potential_integrals(0);
|
---|
388 | integrator_->init(this);
|
---|
389 | integrator_->set_accuracy(desired_gradient_accuracy());
|
---|
390 | integrator_->integrate(functional_, aodens, aodens, dftgrad);
|
---|
391 | integrator_->done();
|
---|
392 | //print_natom_3(dftgrad, "E-X contribution to DFT gradient");
|
---|
393 |
|
---|
394 | scf_grp_->sum(dftgrad, natom3);
|
---|
395 |
|
---|
396 | for (int i=0; i<natom3; i++) tbgrad[i] += dftgrad[i] + hfgrad[i];
|
---|
397 | delete[] dftgrad;
|
---|
398 | delete[] hfgrad;
|
---|
399 |
|
---|
400 | tim_exit("grad");
|
---|
401 | }
|
---|
402 |
|
---|
403 | /////////////////////////////////////////////////////////////////////////////
|
---|
404 |
|
---|
405 | void
|
---|
406 | CLKS::init_vector()
|
---|
407 | {
|
---|
408 | integrator_->init(this);
|
---|
409 | CLSCF::init_vector();
|
---|
410 | }
|
---|
411 |
|
---|
412 | void
|
---|
413 | CLKS::done_vector()
|
---|
414 | {
|
---|
415 | integrator_->done();
|
---|
416 | CLSCF::done_vector();
|
---|
417 | }
|
---|
418 |
|
---|
419 | /////////////////////////////////////////////////////////////////////////////
|
---|
420 |
|
---|
421 | // Local Variables:
|
---|
422 | // mode: c++
|
---|
423 | // c-file-style: "ETS"
|
---|
424 | // End:
|
---|