Action_Thermostats
Add_AtomRandomPerturbation
Add_RotateAroundBondAction
Add_SelectAtomByNameAction
Adding_Graph_to_ChangeBondActions
Adding_MD_integration_tests
Adding_StructOpt_integration_tests
AutomationFragmentation_failures
Candidate_v1.6.0
Candidate_v1.6.1
ChangeBugEmailaddress
ChangingTestPorts
ChemicalSpaceEvaluator
Combining_Subpackages
Debian_Package_split
Debian_package_split_molecuildergui_only
Disabling_MemDebug
Docu_Python_wait
EmpiricalPotential_contain_HomologyGraph_documentation
Enable_parallel_make_install
Enhance_userguide
Enhanced_StructuralOptimization
Enhanced_StructuralOptimization_continued
Example_ManyWaysToTranslateAtom
Exclude_Hydrogens_annealWithBondGraph
FitPartialCharges_GlobalError
Fix_ChronosMutex
Fix_StatusMsg
Fix_StepWorldTime_single_argument
Fix_Verbose_Codepatterns
ForceAnnealing_goodresults
ForceAnnealing_oldresults
ForceAnnealing_tocheck
ForceAnnealing_with_BondGraph
ForceAnnealing_with_BondGraph_continued
ForceAnnealing_with_BondGraph_continued_betteresults
ForceAnnealing_with_BondGraph_contraction-expansion
GeometryObjects
Gui_displays_atomic_force_velocity
IndependentFragmentGrids_IntegrationTest
JobMarket_RobustOnKillsSegFaults
JobMarket_StableWorkerPool
JobMarket_unresolvable_hostname_fix
ODR_violation_mpqc_open
PartialCharges_OrthogonalSummation
PythonUI_with_named_parameters
QtGui_reactivate_TimeChanged_changes
Recreated_GuiChecks
RotateToPrincipalAxisSystem_UndoRedo
StoppableMakroAction
Subpackage_levmar
Subpackage_vmg
ThirdParty_MPQC_rebuilt_buildsystem
TremoloParser_IncreasedPrecision
TremoloParser_MultipleTimesteps
Ubuntu_1604_changes
stable
Line | |
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1 |
|
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2 | concat = 1
|
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3 | overlap = 0
|
---|
4 | eigvals = 0
|
---|
5 | state = 0
|
---|
6 | so = 1
|
---|
7 | atoms = 1
|
---|
8 | petite = 0
|
---|
9 | gpetite = 1
|
---|
10 | values = 1
|
---|
11 | extent = 1
|
---|
12 | aoorthog = 1
|
---|
13 |
|
---|
14 | shell = [3 3 3 3]
|
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15 |
|
---|
16 | xmolecule = $:ico_d5
|
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17 |
|
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18 | basislist = [
|
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19 | "STO-2G"
|
---|
20 | "STO-3G"
|
---|
21 | "STO-3G*"
|
---|
22 | "STO-6G"
|
---|
23 | "MINI (Huzinaga)"
|
---|
24 | "MINI (Scaled)"
|
---|
25 | "MIDI (Huzinaga)"
|
---|
26 | "DZ (Dunning)"
|
---|
27 | "DZP (Dunning)"
|
---|
28 | "DZP + Diffuse (Dunning)"
|
---|
29 | "3-21G"
|
---|
30 | "3-21G*"
|
---|
31 | "3-21++G"
|
---|
32 | "3-21++G*"
|
---|
33 | "4-31G"
|
---|
34 | "6-31G"
|
---|
35 | "6-31G*"
|
---|
36 | "6-31G**"
|
---|
37 | "6-31+G*"
|
---|
38 | "6-31++G"
|
---|
39 | "6-31++G*"
|
---|
40 | "6-31++G**"
|
---|
41 | "6-311G"
|
---|
42 | "6-311G*"
|
---|
43 | "6-311G**"
|
---|
44 | "6-311G(2df,2pd)"
|
---|
45 | "6-311++G**"
|
---|
46 | "6-311++G(2d,2p)"
|
---|
47 | "6-311++G(3df,3pd)"
|
---|
48 | "cc-pVDZ"
|
---|
49 | "cc-pVTZ"
|
---|
50 | "cc-pVQZ"
|
---|
51 | "cc-pV5Z"
|
---|
52 | "cc-pV6Z"
|
---|
53 | "aug-cc-pVDZ"
|
---|
54 | "aug-cc-pVTZ"
|
---|
55 | "aug-cc-pVQZ"
|
---|
56 | "aug-cc-pV5Z"
|
---|
57 | "aug-cc-pV6Z"
|
---|
58 | "cc-pCVDZ"
|
---|
59 | "cc-pCVTZ"
|
---|
60 | "cc-pCVQZ"
|
---|
61 | "cc-pCV5Z"
|
---|
62 | "aug-cc-pCVDZ"
|
---|
63 | "aug-cc-pCVTZ"
|
---|
64 | "aug-cc-pCVQZ"
|
---|
65 | "aug-cc-pCV5Z"
|
---|
66 | "NASA Ames ANO"
|
---|
67 | "pc-0"
|
---|
68 | "pc-1"
|
---|
69 | "pc-2"
|
---|
70 | "pc-3"
|
---|
71 | "pc-4"
|
---|
72 | "pc-0-aug"
|
---|
73 | "pc-1-aug"
|
---|
74 | "pc-2-aug"
|
---|
75 | "pc-3-aug"
|
---|
76 | "pc-4-aug"
|
---|
77 | ]
|
---|
78 |
|
---|
79 | h2o<Molecule>: (
|
---|
80 | symmetry = c2v
|
---|
81 | { atoms geometry } = {
|
---|
82 | o [ 0.0 0.0 0.0 ]
|
---|
83 | h [ 1.5 0.0 1.0 ]
|
---|
84 | }
|
---|
85 | )
|
---|
86 |
|
---|
87 | he<Molecule>: (
|
---|
88 | symmetry = c1
|
---|
89 | { atoms geometry } = {
|
---|
90 | he [ 0.0 0.0 0.0 ]
|
---|
91 | }
|
---|
92 | )
|
---|
93 |
|
---|
94 | h2<Molecule>: (
|
---|
95 | symmetry = d2h
|
---|
96 | { atoms geometry } = {
|
---|
97 | h [ 0.0 0.0 0.7 ]
|
---|
98 | h [ 0.0 0.0 -0.7 ]
|
---|
99 | }
|
---|
100 | )
|
---|
101 |
|
---|
102 | ne<Molecule>: (
|
---|
103 | symmetry = c1
|
---|
104 | { atoms geometry } = {
|
---|
105 | he [ 0.0 0.0 0.0 ]
|
---|
106 | }
|
---|
107 | )
|
---|
108 |
|
---|
109 | molecule = $:h2
|
---|
110 |
|
---|
111 | test2 : [
|
---|
112 | <GaussianBasisSet>: (
|
---|
113 | molecule = $:molecule
|
---|
114 | %name = "foo"
|
---|
115 | name = "STO-3G"
|
---|
116 | %name = "6-31G**"
|
---|
117 | %name = "aug-cc-pVTZ"
|
---|
118 | %puream=yes
|
---|
119 | )
|
---|
120 | ]
|
---|
121 |
|
---|
122 | concat1<GaussianBasisSet>: (
|
---|
123 | molecule = $:molecule
|
---|
124 | name = "6-31G*"
|
---|
125 | )
|
---|
126 |
|
---|
127 | concat2<GaussianBasisSet>: (
|
---|
128 | molecule = $:molecule
|
---|
129 | name = "cc-pV6Z"
|
---|
130 | )
|
---|
131 |
|
---|
132 | test : [
|
---|
133 | <GaussianBasisSet>: (
|
---|
134 | molecule = $:molecule
|
---|
135 | %name = "foo"
|
---|
136 | %name = "STO-3G"
|
---|
137 | %name = "6-31G*"
|
---|
138 | name = "6-311G**"
|
---|
139 | %name = "cc-pVDZ"
|
---|
140 | %name = "aug-cc-pVDZ"
|
---|
141 | %name = "cc-pVTZ"
|
---|
142 | %name = "aug-cc-pVTZ"
|
---|
143 | %puream=yes
|
---|
144 | )
|
---|
145 | ]
|
---|
146 |
|
---|
147 | xtest: [
|
---|
148 | <GaussianBasisSet>: (
|
---|
149 | molecule = $:molecule
|
---|
150 | name = "STO-3G"
|
---|
151 | )
|
---|
152 |
|
---|
153 | <GaussianBasisSet>: (
|
---|
154 | molecule = $:molecule
|
---|
155 | name = "STO-3G"
|
---|
156 | {element basis} = {
|
---|
157 | C "STO-2G"
|
---|
158 | }
|
---|
159 | )
|
---|
160 | <GaussianBasisSet>: (
|
---|
161 | molecule = $:molecule
|
---|
162 | basis = [ "STO-2G"
|
---|
163 | "STO-3G"
|
---|
164 | "STO-2G"
|
---|
165 | "STO-3G"
|
---|
166 | "STO-2G"
|
---|
167 | ]
|
---|
168 | )
|
---|
169 | ]
|
---|
170 |
|
---|
171 |
|
---|
172 | basis: (
|
---|
173 | hydrogen: "foo": [
|
---|
174 | (type: [am = s]
|
---|
175 | {exp coef:0} = {
|
---|
176 | 1.307093214e+02 1.0
|
---|
177 | }
|
---|
178 | )
|
---|
179 | ]
|
---|
180 | carbon: "foo": [
|
---|
181 | (type: [am = d]
|
---|
182 | {exp coef:0} = {
|
---|
183 | 1.307093214e+02 1.0
|
---|
184 | }
|
---|
185 | )
|
---|
186 | ]
|
---|
187 | nitrogen: "foo": [
|
---|
188 | (type: [am = s]
|
---|
189 | {exp coef:0} = {
|
---|
190 | 1.307093214e+02 1.0
|
---|
191 | }
|
---|
192 | )
|
---|
193 | ]
|
---|
194 | )
|
---|
195 |
|
---|
196 | ico<Molecule>: (
|
---|
197 | symmetry = ih
|
---|
198 | angstrom=yes
|
---|
199 | { atoms geometry } = {
|
---|
200 | C [ 0.0000000000 0.0000000000 1.4000000000 ]
|
---|
201 | }
|
---|
202 | )
|
---|
203 |
|
---|
204 | ico_d5<Molecule>: (
|
---|
205 | symmetry = d5d
|
---|
206 | angstrom=yes
|
---|
207 | { atoms geometry } = {
|
---|
208 | C [ 0.0000000000 0.0000000000 1.4000000000 ]
|
---|
209 | C [ 0.0000000000 -1.2521980674 0.6260990337 ]
|
---|
210 | }
|
---|
211 | )
|
---|
212 |
|
---|
213 | dodec<Molecule>: (
|
---|
214 | symmetry = ih
|
---|
215 | angstrom = yes
|
---|
216 | { atoms geometry } = {
|
---|
217 | C [ 1.2762577889 0.0000000000 1.6706431349 ]
|
---|
218 | }
|
---|
219 | )
|
---|
220 |
|
---|
221 | dodec_d5<Molecule>: (
|
---|
222 | symmetry = d5d
|
---|
223 | angstrom = yes
|
---|
224 | { atoms geometry } = {
|
---|
225 | C [ 0.0000000000 1.6300000000 0.3070000000 ]
|
---|
226 | C [ 0.0000000000 1.0130000000 1.3130000000 ]
|
---|
227 | }
|
---|
228 | )
|
---|
229 |
|
---|
230 | bucky<Molecule>: (
|
---|
231 | symmetry = ih
|
---|
232 | angstrom = yes
|
---|
233 | { atoms geometry } = {
|
---|
234 | C [ -1.2265000000 0.0000000000 3.3145000000 ]
|
---|
235 | }
|
---|
236 | )
|
---|
237 |
|
---|
238 | bucky_d5<Molecule>: (
|
---|
239 | symmetry = d5d
|
---|
240 | angstrom = yes
|
---|
241 | { atoms geometry } = {
|
---|
242 | C [ 0.0000000000 -1.2265000000 3.3145000000 ]
|
---|
243 | C [ 0.0000000000 -2.4160714497 2.5793044120 ]
|
---|
244 | C [ 0.6992125547 2.9469022060 1.8212857248 ]
|
---|
245 | C [ 3.4642913133 -0.3675977940 0.5947857248 ]
|
---|
246 | }
|
---|
247 | )
|
---|
248 |
|
---|
249 | %
|
---|
250 | % Local Variables:
|
---|
251 | % mode: keyval
|
---|
252 | % End:
|
---|
253 | %
|
---|
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