Action_Thermostats
Add_AtomRandomPerturbation
Add_RotateAroundBondAction
Add_SelectAtomByNameAction
Adding_Graph_to_ChangeBondActions
Adding_MD_integration_tests
Adding_StructOpt_integration_tests
AutomationFragmentation_failures
Candidate_v1.6.0
Candidate_v1.6.1
Candidate_v1.7.0
ChangeBugEmailaddress
ChangingTestPorts
ChemicalSpaceEvaluator
Combining_Subpackages
Debian_Package_split
Debian_package_split_molecuildergui_only
Disabling_MemDebug
Docu_Python_wait
EmpiricalPotential_contain_HomologyGraph_documentation
Enable_parallel_make_install
Enhance_userguide
Enhanced_StructuralOptimization
Enhanced_StructuralOptimization_continued
Example_ManyWaysToTranslateAtom
Exclude_Hydrogens_annealWithBondGraph
FitPartialCharges_GlobalError
Fix_ChronosMutex
Fix_StatusMsg
Fix_StepWorldTime_single_argument
Fix_Verbose_Codepatterns
ForceAnnealing_goodresults
ForceAnnealing_oldresults
ForceAnnealing_tocheck
ForceAnnealing_with_BondGraph
ForceAnnealing_with_BondGraph_continued
ForceAnnealing_with_BondGraph_continued_betteresults
ForceAnnealing_with_BondGraph_contraction-expansion
GeometryObjects
Gui_displays_atomic_force_velocity
IndependentFragmentGrids_IntegrationTest
JobMarket_RobustOnKillsSegFaults
JobMarket_StableWorkerPool
JobMarket_unresolvable_hostname_fix
ODR_violation_mpqc_open
PartialCharges_OrthogonalSummation
PythonUI_with_named_parameters
QtGui_reactivate_TimeChanged_changes
Recreated_GuiChecks
RotateToPrincipalAxisSystem_UndoRedo
StoppableMakroAction
Subpackage_levmar
Subpackage_vmg
ThirdParty_MPQC_rebuilt_buildsystem
TremoloParser_IncreasedPrecision
TremoloParser_MultipleTimesteps
Ubuntu_1604_changes
stable
| Line | |
|---|
| 1 |
|
|---|
| 2 | concat = 1
|
|---|
| 3 | overlap = 0
|
|---|
| 4 | eigvals = 0
|
|---|
| 5 | state = 0
|
|---|
| 6 | so = 1
|
|---|
| 7 | atoms = 1
|
|---|
| 8 | petite = 0
|
|---|
| 9 | gpetite = 1
|
|---|
| 10 | values = 1
|
|---|
| 11 | extent = 1
|
|---|
| 12 | aoorthog = 1
|
|---|
| 13 |
|
|---|
| 14 | shell = [3 3 3 3]
|
|---|
| 15 |
|
|---|
| 16 | xmolecule = $:ico_d5
|
|---|
| 17 |
|
|---|
| 18 | basislist = [
|
|---|
| 19 | "STO-2G"
|
|---|
| 20 | "STO-3G"
|
|---|
| 21 | "STO-3G*"
|
|---|
| 22 | "STO-6G"
|
|---|
| 23 | "MINI (Huzinaga)"
|
|---|
| 24 | "MINI (Scaled)"
|
|---|
| 25 | "MIDI (Huzinaga)"
|
|---|
| 26 | "DZ (Dunning)"
|
|---|
| 27 | "DZP (Dunning)"
|
|---|
| 28 | "DZP + Diffuse (Dunning)"
|
|---|
| 29 | "3-21G"
|
|---|
| 30 | "3-21G*"
|
|---|
| 31 | "3-21++G"
|
|---|
| 32 | "3-21++G*"
|
|---|
| 33 | "4-31G"
|
|---|
| 34 | "6-31G"
|
|---|
| 35 | "6-31G*"
|
|---|
| 36 | "6-31G**"
|
|---|
| 37 | "6-31+G*"
|
|---|
| 38 | "6-31++G"
|
|---|
| 39 | "6-31++G*"
|
|---|
| 40 | "6-31++G**"
|
|---|
| 41 | "6-311G"
|
|---|
| 42 | "6-311G*"
|
|---|
| 43 | "6-311G**"
|
|---|
| 44 | "6-311G(2df,2pd)"
|
|---|
| 45 | "6-311++G**"
|
|---|
| 46 | "6-311++G(2d,2p)"
|
|---|
| 47 | "6-311++G(3df,3pd)"
|
|---|
| 48 | "cc-pVDZ"
|
|---|
| 49 | "cc-pVTZ"
|
|---|
| 50 | "cc-pVQZ"
|
|---|
| 51 | "cc-pV5Z"
|
|---|
| 52 | "cc-pV6Z"
|
|---|
| 53 | "aug-cc-pVDZ"
|
|---|
| 54 | "aug-cc-pVTZ"
|
|---|
| 55 | "aug-cc-pVQZ"
|
|---|
| 56 | "aug-cc-pV5Z"
|
|---|
| 57 | "aug-cc-pV6Z"
|
|---|
| 58 | "cc-pCVDZ"
|
|---|
| 59 | "cc-pCVTZ"
|
|---|
| 60 | "cc-pCVQZ"
|
|---|
| 61 | "cc-pCV5Z"
|
|---|
| 62 | "aug-cc-pCVDZ"
|
|---|
| 63 | "aug-cc-pCVTZ"
|
|---|
| 64 | "aug-cc-pCVQZ"
|
|---|
| 65 | "aug-cc-pCV5Z"
|
|---|
| 66 | "NASA Ames ANO"
|
|---|
| 67 | "pc-0"
|
|---|
| 68 | "pc-1"
|
|---|
| 69 | "pc-2"
|
|---|
| 70 | "pc-3"
|
|---|
| 71 | "pc-4"
|
|---|
| 72 | "pc-0-aug"
|
|---|
| 73 | "pc-1-aug"
|
|---|
| 74 | "pc-2-aug"
|
|---|
| 75 | "pc-3-aug"
|
|---|
| 76 | "pc-4-aug"
|
|---|
| 77 | ]
|
|---|
| 78 |
|
|---|
| 79 | h2o<Molecule>: (
|
|---|
| 80 | symmetry = c2v
|
|---|
| 81 | { atoms geometry } = {
|
|---|
| 82 | o [ 0.0 0.0 0.0 ]
|
|---|
| 83 | h [ 1.5 0.0 1.0 ]
|
|---|
| 84 | }
|
|---|
| 85 | )
|
|---|
| 86 |
|
|---|
| 87 | he<Molecule>: (
|
|---|
| 88 | symmetry = c1
|
|---|
| 89 | { atoms geometry } = {
|
|---|
| 90 | he [ 0.0 0.0 0.0 ]
|
|---|
| 91 | }
|
|---|
| 92 | )
|
|---|
| 93 |
|
|---|
| 94 | h2<Molecule>: (
|
|---|
| 95 | symmetry = d2h
|
|---|
| 96 | { atoms geometry } = {
|
|---|
| 97 | h [ 0.0 0.0 0.7 ]
|
|---|
| 98 | h [ 0.0 0.0 -0.7 ]
|
|---|
| 99 | }
|
|---|
| 100 | )
|
|---|
| 101 |
|
|---|
| 102 | ne<Molecule>: (
|
|---|
| 103 | symmetry = c1
|
|---|
| 104 | { atoms geometry } = {
|
|---|
| 105 | he [ 0.0 0.0 0.0 ]
|
|---|
| 106 | }
|
|---|
| 107 | )
|
|---|
| 108 |
|
|---|
| 109 | molecule = $:h2
|
|---|
| 110 |
|
|---|
| 111 | test2 : [
|
|---|
| 112 | <GaussianBasisSet>: (
|
|---|
| 113 | molecule = $:molecule
|
|---|
| 114 | %name = "foo"
|
|---|
| 115 | name = "STO-3G"
|
|---|
| 116 | %name = "6-31G**"
|
|---|
| 117 | %name = "aug-cc-pVTZ"
|
|---|
| 118 | %puream=yes
|
|---|
| 119 | )
|
|---|
| 120 | ]
|
|---|
| 121 |
|
|---|
| 122 | concat1<GaussianBasisSet>: (
|
|---|
| 123 | molecule = $:molecule
|
|---|
| 124 | name = "6-31G*"
|
|---|
| 125 | )
|
|---|
| 126 |
|
|---|
| 127 | concat2<GaussianBasisSet>: (
|
|---|
| 128 | molecule = $:molecule
|
|---|
| 129 | name = "cc-pV6Z"
|
|---|
| 130 | )
|
|---|
| 131 |
|
|---|
| 132 | test : [
|
|---|
| 133 | <GaussianBasisSet>: (
|
|---|
| 134 | molecule = $:molecule
|
|---|
| 135 | %name = "foo"
|
|---|
| 136 | %name = "STO-3G"
|
|---|
| 137 | %name = "6-31G*"
|
|---|
| 138 | name = "6-311G**"
|
|---|
| 139 | %name = "cc-pVDZ"
|
|---|
| 140 | %name = "aug-cc-pVDZ"
|
|---|
| 141 | %name = "cc-pVTZ"
|
|---|
| 142 | %name = "aug-cc-pVTZ"
|
|---|
| 143 | %puream=yes
|
|---|
| 144 | )
|
|---|
| 145 | ]
|
|---|
| 146 |
|
|---|
| 147 | xtest: [
|
|---|
| 148 | <GaussianBasisSet>: (
|
|---|
| 149 | molecule = $:molecule
|
|---|
| 150 | name = "STO-3G"
|
|---|
| 151 | )
|
|---|
| 152 |
|
|---|
| 153 | <GaussianBasisSet>: (
|
|---|
| 154 | molecule = $:molecule
|
|---|
| 155 | name = "STO-3G"
|
|---|
| 156 | {element basis} = {
|
|---|
| 157 | C "STO-2G"
|
|---|
| 158 | }
|
|---|
| 159 | )
|
|---|
| 160 | <GaussianBasisSet>: (
|
|---|
| 161 | molecule = $:molecule
|
|---|
| 162 | basis = [ "STO-2G"
|
|---|
| 163 | "STO-3G"
|
|---|
| 164 | "STO-2G"
|
|---|
| 165 | "STO-3G"
|
|---|
| 166 | "STO-2G"
|
|---|
| 167 | ]
|
|---|
| 168 | )
|
|---|
| 169 | ]
|
|---|
| 170 |
|
|---|
| 171 |
|
|---|
| 172 | basis: (
|
|---|
| 173 | hydrogen: "foo": [
|
|---|
| 174 | (type: [am = s]
|
|---|
| 175 | {exp coef:0} = {
|
|---|
| 176 | 1.307093214e+02 1.0
|
|---|
| 177 | }
|
|---|
| 178 | )
|
|---|
| 179 | ]
|
|---|
| 180 | carbon: "foo": [
|
|---|
| 181 | (type: [am = d]
|
|---|
| 182 | {exp coef:0} = {
|
|---|
| 183 | 1.307093214e+02 1.0
|
|---|
| 184 | }
|
|---|
| 185 | )
|
|---|
| 186 | ]
|
|---|
| 187 | nitrogen: "foo": [
|
|---|
| 188 | (type: [am = s]
|
|---|
| 189 | {exp coef:0} = {
|
|---|
| 190 | 1.307093214e+02 1.0
|
|---|
| 191 | }
|
|---|
| 192 | )
|
|---|
| 193 | ]
|
|---|
| 194 | )
|
|---|
| 195 |
|
|---|
| 196 | ico<Molecule>: (
|
|---|
| 197 | symmetry = ih
|
|---|
| 198 | angstrom=yes
|
|---|
| 199 | { atoms geometry } = {
|
|---|
| 200 | C [ 0.0000000000 0.0000000000 1.4000000000 ]
|
|---|
| 201 | }
|
|---|
| 202 | )
|
|---|
| 203 |
|
|---|
| 204 | ico_d5<Molecule>: (
|
|---|
| 205 | symmetry = d5d
|
|---|
| 206 | angstrom=yes
|
|---|
| 207 | { atoms geometry } = {
|
|---|
| 208 | C [ 0.0000000000 0.0000000000 1.4000000000 ]
|
|---|
| 209 | C [ 0.0000000000 -1.2521980674 0.6260990337 ]
|
|---|
| 210 | }
|
|---|
| 211 | )
|
|---|
| 212 |
|
|---|
| 213 | dodec<Molecule>: (
|
|---|
| 214 | symmetry = ih
|
|---|
| 215 | angstrom = yes
|
|---|
| 216 | { atoms geometry } = {
|
|---|
| 217 | C [ 1.2762577889 0.0000000000 1.6706431349 ]
|
|---|
| 218 | }
|
|---|
| 219 | )
|
|---|
| 220 |
|
|---|
| 221 | dodec_d5<Molecule>: (
|
|---|
| 222 | symmetry = d5d
|
|---|
| 223 | angstrom = yes
|
|---|
| 224 | { atoms geometry } = {
|
|---|
| 225 | C [ 0.0000000000 1.6300000000 0.3070000000 ]
|
|---|
| 226 | C [ 0.0000000000 1.0130000000 1.3130000000 ]
|
|---|
| 227 | }
|
|---|
| 228 | )
|
|---|
| 229 |
|
|---|
| 230 | bucky<Molecule>: (
|
|---|
| 231 | symmetry = ih
|
|---|
| 232 | angstrom = yes
|
|---|
| 233 | { atoms geometry } = {
|
|---|
| 234 | C [ -1.2265000000 0.0000000000 3.3145000000 ]
|
|---|
| 235 | }
|
|---|
| 236 | )
|
|---|
| 237 |
|
|---|
| 238 | bucky_d5<Molecule>: (
|
|---|
| 239 | symmetry = d5d
|
|---|
| 240 | angstrom = yes
|
|---|
| 241 | { atoms geometry } = {
|
|---|
| 242 | C [ 0.0000000000 -1.2265000000 3.3145000000 ]
|
|---|
| 243 | C [ 0.0000000000 -2.4160714497 2.5793044120 ]
|
|---|
| 244 | C [ 0.6992125547 2.9469022060 1.8212857248 ]
|
|---|
| 245 | C [ 3.4642913133 -0.3675977940 0.5947857248 ]
|
|---|
| 246 | }
|
|---|
| 247 | )
|
|---|
| 248 |
|
|---|
| 249 | %
|
|---|
| 250 | % Local Variables:
|
|---|
| 251 | % mode: keyval
|
|---|
| 252 | % End:
|
|---|
| 253 | %
|
|---|
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