1 | //
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2 | // File: MPQC_GaussianBasis_Molecular_Impl.cc
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3 | // Symbol: MPQC.GaussianBasis_Molecular-v0.2
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4 | // Symbol Type: class
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5 | // Babel Version: 0.10.2
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6 | // Description: Server-side implementation for MPQC.GaussianBasis_Molecular
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7 | //
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8 | // WARNING: Automatically generated; only changes within splicers preserved
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9 | //
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10 | // babel-version = 0.10.2
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11 | //
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12 | #include "MPQC_GaussianBasis_Molecular_Impl.hh"
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13 |
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14 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular._includes)
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15 | #include <chemistry/molecule/molecule.h>
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16 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular._includes)
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17 |
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18 | // user-defined constructor.
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19 | void MPQC::GaussianBasis_Molecular_impl::_ctor() {
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20 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular._ctor)
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21 | // add construction details here
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22 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular._ctor)
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23 | }
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24 |
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25 | // user-defined destructor.
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26 | void MPQC::GaussianBasis_Molecular_impl::_dtor() {
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27 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular._dtor)
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28 |
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29 | // JK: problems here
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30 | //for(int i=0; i<natom_; ++i)
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31 | // delete &atomic_array_[i];
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32 | //delete atomic_array_;
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33 |
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34 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular._dtor)
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35 | }
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36 |
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37 | // static class initializer.
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38 | void MPQC::GaussianBasis_Molecular_impl::_load() {
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39 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular._load)
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40 | // guaranteed to be called at most once before any other method in this class
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41 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular._load)
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42 | }
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43 |
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44 | // user-defined static methods: (none)
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45 |
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46 | // user-defined non-static methods:
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47 | /**
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48 | * Method: initialize[]
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49 | */
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50 | void
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51 | MPQC::GaussianBasis_Molecular_impl::initialize (
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52 | /* in */ void* scbasis,
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53 | /* in */ const ::std::string& label )
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54 | throw ()
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55 | {
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56 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.initialize)
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57 |
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58 | label_ = label;
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59 |
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60 | gbs_ptr_ = static_cast< GaussianBasisSet* >(scbasis);
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61 | sc_gbs_.assign_pointer( gbs_ptr_ );
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62 | if(sc_gbs_.null())
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63 | cout << "Molecular: sc::GaussianBasisSet is null" << endl;
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64 |
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65 | // determine angular type
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66 | int has_pure = 0;
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67 | int has_cartesian = 0;
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68 | for(int i=0; i<sc_gbs_->nshell(); ++i) {
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69 | for(int j=0; j<sc_gbs_->shell(i).ncontraction(); ++j) {
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70 | if( sc_gbs_->shell(i).is_cartesian(j) )
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71 | ++has_cartesian;
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72 | if( sc_gbs_->shell(i).is_pure(j) )
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73 | ++has_pure;
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74 | }
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75 | }
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76 |
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77 | if(has_pure && has_cartesian)
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78 | angular_type_ = AngularType_MIXED;
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79 | else if(has_pure)
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80 | angular_type_ = AngularType_SPHERICAL;
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81 | else if(has_cartesian)
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82 | angular_type_ = AngularType_CARTESIAN;
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83 |
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84 | // create a CCA molecule
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85 | Ref<sc::Molecule> scmol = sc_gbs_->molecule();
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86 | natom_ = scmol->natom();
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87 | molecule_ = Chemistry_Molecule::_create();
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88 | molecule_.initialize(natom_, "bohr");
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89 | for( int i=0; i<natom_; ++i) {
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90 | molecule_.set_atomic_number(i,scmol->Z(i));
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91 | for( int j=0; j<3; ++j)
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92 | molecule_.set_cart_coor( i, j, scmol->r(i,j) );
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93 | }
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94 |
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95 | // create array of atomic basis sets
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96 | atomic_array_ = new MPQC::GaussianBasis_Atomic[sc_gbs_->ncenter()];
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97 | for( int i=0; i<sc_gbs_->ncenter(); ++i) {
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98 | atomic_array_[i] = MPQC::GaussianBasis_Atomic::_create();
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99 | atomic_array_[i].initialize(sc_gbs_.pointer(),i);
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100 | }
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101 |
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102 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.initialize)
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103 | }
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104 |
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105 | /**
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106 | * Method: sc_gbs_pointer[]
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107 | */
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108 | void*
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109 | MPQC::GaussianBasis_Molecular_impl::sc_gbs_pointer ()
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110 | throw ()
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111 |
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112 | {
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113 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.sc_gbs_pointer)
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114 | // insert implementation here
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115 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.sc_gbs_pointer)
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116 | }
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117 |
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118 | /**
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119 | * Get the user specified name.
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120 | * @return User specified name.
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121 | */
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122 | ::std::string
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123 | MPQC::GaussianBasis_Molecular_impl::get_label ()
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124 | throw ()
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125 |
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126 | {
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127 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.get_label)
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128 | return label_;
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129 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.get_label)
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130 | }
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131 |
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132 | /**
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133 | * Get the number of basis functions.
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134 | * @return Number of basis functions.
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135 | */
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136 | int64_t
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137 | MPQC::GaussianBasis_Molecular_impl::get_n_basis ()
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138 | throw ()
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139 |
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140 | {
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141 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.get_n_basis)
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142 | return sc_gbs_->nbasis();
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143 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.get_n_basis)
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144 | }
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145 |
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146 | /**
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147 | * Get the number of shells.
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148 | * @return Number of shells.
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149 | */
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150 | int64_t
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151 | MPQC::GaussianBasis_Molecular_impl::get_n_shell ()
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152 | throw ()
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153 |
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154 | {
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155 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.get_n_shell)
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156 | return sc_gbs_->nshell();
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157 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.get_n_shell)
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158 | }
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159 |
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160 | /**
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161 | * Get the max angular momentum for any contraction in the basis set.
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162 | * @return Max angular momentum value.
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163 | */
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164 | int64_t
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165 | MPQC::GaussianBasis_Molecular_impl::get_max_angular_momentum ()
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166 | throw ()
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167 |
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168 | {
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169 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.get_max_angular_momentum)
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170 | return sc_gbs_->max_angular_momentum();
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171 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.get_max_angular_momentum)
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172 | }
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173 |
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174 | /**
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175 | * Get the angular type.
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176 | * @return enum AngularType {CARTESIAN,SPHERICAL,MIXED}
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177 | */
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178 | ::Chemistry::QC::GaussianBasis::AngularType
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179 | MPQC::GaussianBasis_Molecular_impl::get_angular_type ()
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180 | throw ()
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181 |
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182 | {
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183 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.get_angular_type)
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184 | return angular_type_;
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185 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.get_angular_type)
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186 | }
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187 |
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188 | /**
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189 | * Get an atomic basis set.
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190 | * @param atomnum Atom number.
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191 | * @return Atomic basis set.
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192 | */
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193 | ::Chemistry::QC::GaussianBasis::Atomic
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194 | MPQC::GaussianBasis_Molecular_impl::get_atomic (
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195 | /* in */ int64_t atomnum )
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196 | throw ()
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197 | {
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198 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.get_atomic)
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199 | return atomic_array_[atomnum];
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200 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.get_atomic)
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201 | }
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202 |
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203 | /**
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204 | * Get the molecule.
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205 | * @return The molecule.
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206 | */
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207 | ::Chemistry::Molecule
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208 | MPQC::GaussianBasis_Molecular_impl::get_molecule ()
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209 | throw ()
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210 |
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211 | {
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212 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.get_molecule)
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213 | return molecule_;
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214 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.get_molecule)
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215 | }
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216 |
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217 | /**
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218 | * Print the molecular basis data.
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219 | */
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220 | void
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221 | MPQC::GaussianBasis_Molecular_impl::print_molecular ()
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222 | throw ()
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223 |
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224 | {
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225 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular.print_molecular)
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226 | std::cout << "\nMolecular Basis Set:";
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227 | for( int i=0; i<natom_; ++i) {
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228 | atomic_array_[i].print_atomic();
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229 | }
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230 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular.print_molecular)
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231 | }
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232 |
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233 |
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234 | // DO-NOT-DELETE splicer.begin(MPQC.GaussianBasis_Molecular._misc)
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235 | // Put miscellaneous code here
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236 | // DO-NOT-DELETE splicer.end(MPQC.GaussianBasis_Molecular._misc)
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237 |
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