source: ThirdParty/mpqc_open/src/bin/mpqc/sample/ts.in@ 860145

Action_Thermostats Add_AtomRandomPerturbation Add_RotateAroundBondAction Add_SelectAtomByNameAction Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_StructOpt_integration_tests Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_ChronosMutex Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion GeometryObjects Gui_displays_atomic_force_velocity IndependentFragmentGrids_IntegrationTest JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks RotateToPrincipalAxisSystem_UndoRedo StoppableMakroAction Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg ThirdParty_MPQC_rebuilt_buildsystem TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps Ubuntu_1604_changes stable
Last change on this file since 860145 was 860145, checked in by Frederik Heber <heber@…>, 8 years ago

Merge commit '0b990dfaa8c6007a996d030163a25f7f5fc8a7e7' as 'ThirdParty/mpqc_open'

  • Property mode set to 100644
File size: 2.7 KB
RevLine 
[0b990d]1% emacs should use -*- KeyVal -*- mode
2% molecule specification
3molecule<Molecule>: (
4 symmetry = CS
5 { atoms geometry } = {
6 H [ 3.045436 -0.697438 -1.596748 ]
7 H [ 3.045436 -0.697438 1.596748 ]
8 N [ 2.098157 -0.482779 -0.000000 ]
9 C [ -0.582616 -0.151798 0.000000 ]
10 H [ -1.171620 1.822306 0.000000 ]
11 H [ -1.417337 -1.042238 -1.647529 ]
12 H [ -1.417337 -1.042238 1.647529 ]
13 }
14)
15% basis set specification
16basis<GaussianBasisSet>: (
17 name = "4-31G*"
18 molecule = $:molecule
19)
20mpqc: (
21 checkpoint = no
22 savestate = no
23 % molecular coordinates for optimization
24 coor<SymmMolecularCoor>: (
25 molecule = $:molecule
26 generator<IntCoorGen>: (
27 molecule = $:molecule
28 )
29 followed<OutSimpleCo> = [ "N-inversion" 4 3 2 1 ]
30 )
31 % method for computing the molecule's energy
32 mole<CLHF>: (
33 molecule = $:molecule
34 basis = $:basis
35 coor = $..:coor
36 memory = 16000000
37 )
38 % optimizer object for the molecular geometry
39 opt<EFCOpt>: (
40 transition_state = yes
41 mode_following = yes
42 max_iterations = 20
43 function = $..:mole
44 update<PowellUpdate>: ()
45 convergence<MolEnergyConvergence>: (
46 cartesian = yes
47 energy = $..:..:mole
48 )
49 )
50)
51
52basis:(
53 hydrogen: "4-31G*": [
54 (type: [am = s]
55 {exp coef:0} = {
56 18.73113700 0.03349460
57 2.82539440 0.23472690
58 0.64012170 0.81375730
59 })
60 (type: [am = s]
61 {exp coef:0} = {
62 0.16127780 1.00000000
63 })
64 ]
65 carbon: "4-31G*": [
66 (type: [am = s]
67 {exp coef:0} = {
68 486.96693000 0.01772580
69 73.37109400 0.12347870
70 16.41345800 0.43387540
71 4.34498360 0.56150420
72 })
73 (type: [am = p am = s]
74 {exp coef:1 coef:0} = {
75 8.67352530 -0.12138370 0.06354540
76 2.09661930 -0.22733850 0.29826780
77 0.60465130 1.18517390 0.76210320
78 })
79 (type: [am = p am = s]
80 {exp coef:1 coef:0} = {
81 0.18355780 1.00000000 1.00000000
82 })
83 (type: [am = d]
84 {exp coef:0} = {
85 0.80000000 1.00000000
86 })
87 ]
88 nitrogen: "4-31G*": [
89 (type: [am = s]
90 {exp coef:0} = {
91 671.27950000 0.01759825
92 101.20170000 0.12284624
93 22.69997000 0.43378214
94 6.04060900 0.56141822
95 })
96 (type: [am = p am = s]
97 {exp coef:1 coef:0} = {
98 12.39359970 -0.11748930 0.06402034
99 2.92238280 -0.21399402 0.31120256
100 0.83252808 1.17450211 0.75274824
101 })
102 (type: [am = p am = s]
103 {exp coef:1 coef:0} = {
104 0.22596400 1.00000000 1.00000000
105 })
106 (type: [am = d]
107 {exp coef:0} = {
108 0.80000000 1.00000000
109 })
110 ]
111)
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