| [5443b1] | 1 | /* //////////////////////////////////////////////////////////////////////////////// | 
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|  | 2 | // | 
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|  | 3 | //  Matlab MEX file for the Levenberg - Marquardt minimization algorithm | 
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|  | 4 | //  Copyright (C) 2007  Manolis Lourakis (lourakis at ics forth gr) | 
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|  | 5 | //  Institute of Computer Science, Foundation for Research & Technology - Hellas | 
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|  | 6 | //  Heraklion, Crete, Greece. | 
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|  | 7 | // | 
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|  | 8 | //  This program is free software; you can redistribute it and/or modify | 
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|  | 9 | //  it under the terms of the GNU General Public License as published by | 
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|  | 10 | //  the Free Software Foundation; either version 2 of the License, or | 
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|  | 11 | //  (at your option) any later version. | 
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|  | 12 | // | 
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|  | 13 | //  This program is distributed in the hope that it will be useful, | 
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|  | 14 | //  but WITHOUT ANY WARRANTY; without even the implied warranty of | 
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|  | 15 | //  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the | 
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|  | 16 | //  GNU General Public License for more details. | 
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|  | 17 | // | 
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|  | 18 | //////////////////////////////////////////////////////////////////////////////// */ | 
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|  | 19 |  | 
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|  | 20 | #include <stdio.h> | 
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|  | 21 | #include <stdlib.h> | 
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|  | 22 | #include <stdarg.h> | 
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|  | 23 | #include <math.h> | 
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|  | 24 | #include <string.h> | 
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|  | 25 | #include <ctype.h> | 
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|  | 26 |  | 
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|  | 27 | #include <levmar.h> | 
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|  | 28 |  | 
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|  | 29 | #include <mex.h> | 
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|  | 30 |  | 
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|  | 31 | /** | 
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|  | 32 | #define DEBUG | 
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|  | 33 | **/ | 
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|  | 34 |  | 
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|  | 35 | #ifndef HAVE_LAPACK | 
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|  | 36 | #ifdef _MSC_VER | 
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|  | 37 | #pragma message("LAPACK not available, certain functionalities cannot be compiled!") | 
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|  | 38 | #else | 
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|  | 39 | #warning LAPACK not available, certain functionalities cannot be compiled | 
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|  | 40 | #endif /* _MSC_VER */ | 
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|  | 41 | #endif /* HAVE_LAPACK */ | 
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|  | 42 |  | 
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|  | 43 | #define __MAX__(A, B)     ((A)>=(B)? (A) : (B)) | 
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|  | 44 |  | 
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|  | 45 | #define MIN_UNCONSTRAINED     0 | 
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|  | 46 | #define MIN_CONSTRAINED_BC    1 | 
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|  | 47 | #define MIN_CONSTRAINED_LEC   2 | 
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|  | 48 | #define MIN_CONSTRAINED_BLEC  3 | 
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|  | 49 | #define MIN_CONSTRAINED_BLEIC 4 | 
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|  | 50 | #define MIN_CONSTRAINED_BLIC  5 | 
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|  | 51 | #define MIN_CONSTRAINED_LEIC  6 | 
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|  | 52 | #define MIN_CONSTRAINED_LIC   7 | 
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|  | 53 |  | 
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|  | 54 | struct mexdata { | 
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|  | 55 | /* matlab names of the fitting function & its Jacobian */ | 
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|  | 56 | char *fname, *jacname; | 
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|  | 57 |  | 
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|  | 58 | /* binary flags specifying if input p0 is a row or column vector */ | 
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|  | 59 | int isrow_p0; | 
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|  | 60 |  | 
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|  | 61 | /* rhs args to be passed to matlab. rhs[0] is reserved for | 
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|  | 62 | * passing the parameter vector. If present, problem-specific | 
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|  | 63 | * data are passed in rhs[1], rhs[2], etc | 
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|  | 64 | */ | 
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|  | 65 | mxArray **rhs; | 
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|  | 66 | int nrhs; /* >= 1 */ | 
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|  | 67 | }; | 
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|  | 68 |  | 
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|  | 69 | /* display printf-style error messages in matlab */ | 
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|  | 70 | static void matlabFmtdErrMsgTxt(char *fmt, ...) | 
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|  | 71 | { | 
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|  | 72 | char  buf[256]; | 
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|  | 73 | va_list args; | 
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|  | 74 |  | 
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|  | 75 | va_start(args, fmt); | 
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|  | 76 | vsprintf(buf, fmt, args); | 
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|  | 77 | va_end(args); | 
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|  | 78 |  | 
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|  | 79 | mexErrMsgTxt(buf); | 
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|  | 80 | } | 
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|  | 81 |  | 
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|  | 82 | /* display printf-style warning messages in matlab */ | 
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|  | 83 | static void matlabFmtdWarnMsgTxt(char *fmt, ...) | 
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|  | 84 | { | 
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|  | 85 | char  buf[256]; | 
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|  | 86 | va_list args; | 
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|  | 87 |  | 
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|  | 88 | va_start(args, fmt); | 
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|  | 89 | vsprintf(buf, fmt, args); | 
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|  | 90 | va_end(args); | 
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|  | 91 |  | 
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|  | 92 | mexWarnMsgTxt(buf); | 
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|  | 93 | } | 
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|  | 94 |  | 
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|  | 95 | static void func(double *p, double *hx, int m, int n, void *adata) | 
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|  | 96 | { | 
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|  | 97 | mxArray *lhs[1]; | 
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|  | 98 | double *mp, *mx; | 
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|  | 99 | register int i; | 
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|  | 100 | struct mexdata *dat=(struct mexdata *)adata; | 
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|  | 101 |  | 
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|  | 102 | /* prepare to call matlab */ | 
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|  | 103 | mp=mxGetPr(dat->rhs[0]); | 
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|  | 104 | for(i=0; i<m; ++i) | 
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|  | 105 | mp[i]=p[i]; | 
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|  | 106 |  | 
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|  | 107 | /* invoke matlab */ | 
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|  | 108 | mexCallMATLAB(1, lhs, dat->nrhs, dat->rhs, dat->fname); | 
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|  | 109 |  | 
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|  | 110 | /* copy back results & cleanup */ | 
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|  | 111 | mx=mxGetPr(lhs[0]); | 
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|  | 112 | for(i=0; i<n; ++i) | 
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|  | 113 | hx[i]=mx[i]; | 
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|  | 114 |  | 
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|  | 115 | /* delete the matrix created by matlab */ | 
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|  | 116 | mxDestroyArray(lhs[0]); | 
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|  | 117 | } | 
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|  | 118 |  | 
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|  | 119 | static void jacfunc(double *p, double *j, int m, int n, void *adata) | 
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|  | 120 | { | 
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|  | 121 | mxArray *lhs[1]; | 
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|  | 122 | double *mp; | 
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|  | 123 | double *mj; | 
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|  | 124 | register int i, k; | 
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|  | 125 | struct mexdata *dat=(struct mexdata *)adata; | 
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|  | 126 |  | 
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|  | 127 | /* prepare to call matlab */ | 
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|  | 128 | mp=mxGetPr(dat->rhs[0]); | 
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|  | 129 | for(i=0; i<m; ++i) | 
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|  | 130 | mp[i]=p[i]; | 
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|  | 131 |  | 
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|  | 132 | /* invoke matlab */ | 
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|  | 133 | mexCallMATLAB(1, lhs, dat->nrhs, dat->rhs, dat->jacname); | 
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|  | 134 |  | 
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|  | 135 | /* copy back results & cleanup. Note that the nxm Jacobian | 
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|  | 136 | * computed by matlab should be transposed so that | 
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|  | 137 | * levmar gets it in row major, as expected | 
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|  | 138 | */ | 
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|  | 139 | mj=mxGetPr(lhs[0]); | 
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|  | 140 | for(i=0; i<n; ++i) | 
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|  | 141 | for(k=0; k<m; ++k) | 
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|  | 142 | j[i*m+k]=mj[i+k*n]; | 
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|  | 143 |  | 
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|  | 144 | /* delete the matrix created by matlab */ | 
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|  | 145 | mxDestroyArray(lhs[0]); | 
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|  | 146 | } | 
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|  | 147 |  | 
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|  | 148 | /* matlab matrices are in column-major, this routine converts them to row major for levmar */ | 
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|  | 149 | static double *getTranspose(mxArray *Am) | 
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|  | 150 | { | 
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|  | 151 | int m, n; | 
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|  | 152 | double *At, *A; | 
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|  | 153 | register int i, j; | 
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|  | 154 |  | 
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|  | 155 | m=mxGetM(Am); | 
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|  | 156 | n=mxGetN(Am); | 
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|  | 157 | A=mxGetPr(Am); | 
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|  | 158 | At=mxMalloc(m*n*sizeof(double)); | 
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|  | 159 |  | 
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|  | 160 | for(i=0; i<m; i++) | 
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|  | 161 | for(j=0; j<n; j++) | 
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|  | 162 | At[i*n+j]=A[i+j*m]; | 
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|  | 163 |  | 
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|  | 164 | return At; | 
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|  | 165 | } | 
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|  | 166 |  | 
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|  | 167 | /* check the supplied matlab function and its Jacobian. Returns 1 on error, 0 otherwise */ | 
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|  | 168 | static int checkFuncAndJacobian(double *p, int  m, int n, int havejac, struct mexdata *dat) | 
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|  | 169 | { | 
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|  | 170 | mxArray *lhs[1]; | 
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|  | 171 | register int i; | 
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|  | 172 | int ret=0; | 
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|  | 173 | double *mp; | 
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|  | 174 |  | 
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|  | 175 | mexSetTrapFlag(1); /* handle errors in the MEX-file */ | 
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|  | 176 |  | 
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|  | 177 | mp=mxGetPr(dat->rhs[0]); | 
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|  | 178 | for(i=0; i<m; ++i) | 
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|  | 179 | mp[i]=p[i]; | 
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|  | 180 |  | 
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|  | 181 | /* attempt to call the supplied func */ | 
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|  | 182 | i=mexCallMATLAB(1, lhs, dat->nrhs, dat->rhs, dat->fname); | 
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|  | 183 | if(i){ | 
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|  | 184 | fprintf(stderr, "levmar: error calling '%s'.\n", dat->fname); | 
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|  | 185 | ret=1; | 
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|  | 186 | } | 
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|  | 187 | else if(!mxIsDouble(lhs[0]) || mxIsComplex(lhs[0]) || !(mxGetM(lhs[0])==1 || mxGetN(lhs[0])==1) || | 
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|  | 188 | __MAX__(mxGetM(lhs[0]), mxGetN(lhs[0]))!=n){ | 
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|  | 189 | fprintf(stderr, "levmar: '%s' should produce a real vector with %d elements (got %d).\n", | 
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|  | 190 | dat->fname, n, __MAX__(mxGetM(lhs[0]), mxGetN(lhs[0]))); | 
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|  | 191 | ret=1; | 
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|  | 192 | } | 
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|  | 193 | /* delete the matrix created by matlab */ | 
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|  | 194 | mxDestroyArray(lhs[0]); | 
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|  | 195 |  | 
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|  | 196 | if(havejac){ | 
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|  | 197 | /* attempt to call the supplied jac  */ | 
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|  | 198 | i=mexCallMATLAB(1, lhs, dat->nrhs, dat->rhs, dat->jacname); | 
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|  | 199 | if(i){ | 
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|  | 200 | fprintf(stderr, "levmar: error calling '%s'.\n", dat->jacname); | 
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|  | 201 | ret=1; | 
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|  | 202 | } | 
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|  | 203 | else if(!mxIsDouble(lhs[0]) || mxIsComplex(lhs[0]) || mxGetM(lhs[0])!=n || mxGetN(lhs[0])!=m){ | 
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|  | 204 | fprintf(stderr, "levmar: '%s' should produce a real %dx%d matrix (got %dx%d).\n", | 
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|  | 205 | dat->jacname, n, m, mxGetM(lhs[0]), mxGetN(lhs[0])); | 
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|  | 206 | ret=1; | 
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|  | 207 | } | 
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|  | 208 | else if(mxIsSparse(lhs[0])){ | 
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|  | 209 | fprintf(stderr, "levmar: '%s' should produce a real dense matrix (got a sparse one).\n", dat->jacname); | 
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|  | 210 | ret=1; | 
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|  | 211 | } | 
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|  | 212 | /* delete the matrix created by matlab */ | 
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|  | 213 | mxDestroyArray(lhs[0]); | 
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|  | 214 | } | 
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|  | 215 |  | 
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|  | 216 | mexSetTrapFlag(0); /* on error terminate the MEX-file and return control to the MATLAB prompt */ | 
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|  | 217 |  | 
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|  | 218 | return ret; | 
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|  | 219 | } | 
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|  | 220 |  | 
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|  | 221 |  | 
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|  | 222 | /* | 
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|  | 223 | [ret, p, info, covar]=levmar_der (f, j, p0, x, itmax, opts, 'unc'                              ...) | 
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|  | 224 | [ret, p, info, covar]=levmar_bc  (f, j, p0, x, itmax, opts, 'bc',   lb, ub,                    ...) | 
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|  | 225 | [ret, p, info, covar]=levmar_bc  (f, j, p0, x, itmax, opts, 'bc',   lb, ub, dscl,              ...) | 
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|  | 226 | [ret, p, info, covar]=levmar_lec (f, j, p0, x, itmax, opts, 'lec',                A, b,        ...) | 
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|  | 227 | [ret, p, info, covar]=levmar_blec(f, j, p0, x, itmax, opts, 'blec', lb, ub,       A, b, wghts, ...) | 
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|  | 228 |  | 
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|  | 229 | [ret, p, info, covar]=levmar_bleic(f, j, p0, x, itmax, opts, 'bleic', lb, ub,       A, b, C, d, ...) | 
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|  | 230 | [ret, p, info, covar]=levmar_blic (f, j, p0, x, itmax, opts, 'blic',  lb, ub,             C, d, ...) | 
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|  | 231 | [ret, p, info, covar]=levmar_leic (f, j, p0, x, itmax, opts, 'leic',                A, b, C, d, ...) | 
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|  | 232 | [ret, p, info, covar]=levmar_lic  (f, j, p0, x, itmax, opts, 'lic',                       C, d, ...) | 
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|  | 233 |  | 
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|  | 234 | */ | 
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|  | 235 |  | 
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|  | 236 | void mexFunction(int nlhs, mxArray *plhs[], int nrhs, const mxArray *Prhs[]) | 
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|  | 237 | { | 
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|  | 238 | register int i; | 
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|  | 239 | register double *pdbl; | 
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|  | 240 | mxArray **prhs=(mxArray **)&Prhs[0], *At, *Ct; | 
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|  | 241 | struct mexdata mdata; | 
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|  | 242 | int len, status; | 
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|  | 243 | double *p, *p0, *ret, *x; | 
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|  | 244 | int m, n, havejac, Arows, Crows, itmax, nopts, mintype, nextra; | 
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|  | 245 | double opts[LM_OPTS_SZ]={LM_INIT_MU, LM_STOP_THRESH, LM_STOP_THRESH, LM_STOP_THRESH, LM_DIFF_DELTA}; | 
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|  | 246 | double info[LM_INFO_SZ]; | 
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|  | 247 | double *lb=NULL, *ub=NULL, *dscl=NULL, *A=NULL, *b=NULL, *wghts=NULL, *C=NULL, *d=NULL, *covar=NULL; | 
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|  | 248 |  | 
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|  | 249 | /* parse input args; start by checking their number */ | 
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|  | 250 | if((nrhs<5)) | 
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|  | 251 | matlabFmtdErrMsgTxt("levmar: at least 5 input arguments required (got %d).", nrhs); | 
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|  | 252 | if(nlhs>4) | 
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|  | 253 | matlabFmtdErrMsgTxt("levmar: too many output arguments (max. 4, got %d).", nlhs); | 
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|  | 254 | else if(nlhs<2) | 
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|  | 255 | matlabFmtdErrMsgTxt("levmar: too few output arguments (min. 2, got %d).", nlhs); | 
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|  | 256 |  | 
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|  | 257 | /* note that in order to accommodate optional args, prhs & nrhs are adjusted accordingly below */ | 
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|  | 258 |  | 
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|  | 259 | /** func **/ | 
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|  | 260 | /* first argument must be a string , i.e. a char row vector */ | 
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|  | 261 | if(mxIsChar(prhs[0])!=1) | 
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|  | 262 | mexErrMsgTxt("levmar: first argument must be a string."); | 
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|  | 263 | if(mxGetM(prhs[0])!=1) | 
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|  | 264 | mexErrMsgTxt("levmar: first argument must be a string (i.e. char row vector)."); | 
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|  | 265 | /* store supplied name */ | 
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|  | 266 | len=mxGetN(prhs[0])+1; | 
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|  | 267 | mdata.fname=mxCalloc(len, sizeof(char)); | 
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|  | 268 | status=mxGetString(prhs[0], mdata.fname, len); | 
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|  | 269 | if(status!=0) | 
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|  | 270 | mexErrMsgTxt("levmar: not enough space. String is truncated."); | 
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|  | 271 |  | 
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|  | 272 | /** jac (optional) **/ | 
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|  | 273 | /* check whether second argument is a string */ | 
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|  | 274 | if(mxIsChar(prhs[1])==1){ | 
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|  | 275 | if(mxGetM(prhs[1])!=1) | 
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|  | 276 | mexErrMsgTxt("levmar: second argument must be a string (i.e. row vector)."); | 
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|  | 277 | /* store supplied name */ | 
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|  | 278 | len=mxGetN(prhs[1])+1; | 
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|  | 279 | mdata.jacname=mxCalloc(len, sizeof(char)); | 
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|  | 280 | status=mxGetString(prhs[1], mdata.jacname, len); | 
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|  | 281 | if(status!=0) | 
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|  | 282 | mexErrMsgTxt("levmar: not enough space. String is truncated."); | 
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|  | 283 | havejac=1; | 
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|  | 284 |  | 
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|  | 285 | ++prhs; | 
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|  | 286 | --nrhs; | 
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|  | 287 | } | 
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|  | 288 | else{ | 
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|  | 289 | mdata.jacname=NULL; | 
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|  | 290 | havejac=0; | 
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|  | 291 | } | 
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|  | 292 |  | 
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|  | 293 | #ifdef DEBUG | 
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|  | 294 | fflush(stderr); | 
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|  | 295 | fprintf(stderr, "LEVMAR: %s analytic Jacobian\n", havejac? "with" : "no"); | 
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|  | 296 | #endif /* DEBUG */ | 
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|  | 297 |  | 
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|  | 298 | /* CHECK | 
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|  | 299 | if(!mxIsDouble(prhs[1]) || mxIsComplex(prhs[1]) || !(mxGetM(prhs[1])==1 && mxGetN(prhs[1])==1)) | 
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|  | 300 | */ | 
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|  | 301 |  | 
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|  | 302 | /** p0 **/ | 
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|  | 303 | /* the second required argument must be a real row or column vector */ | 
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|  | 304 | if(!mxIsDouble(prhs[1]) || mxIsComplex(prhs[1]) || !(mxGetM(prhs[1])==1 || mxGetN(prhs[1])==1)) | 
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|  | 305 | mexErrMsgTxt("levmar: p0 must be a real vector."); | 
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|  | 306 | p0=mxGetPr(prhs[1]); | 
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|  | 307 | /* determine if we have a row or column vector and retrieve its | 
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|  | 308 | * size, i.e. the number of parameters | 
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|  | 309 | */ | 
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|  | 310 | if(mxGetM(prhs[1])==1){ | 
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|  | 311 | m=mxGetN(prhs[1]); | 
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|  | 312 | mdata.isrow_p0=1; | 
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|  | 313 | } | 
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|  | 314 | else{ | 
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|  | 315 | m=mxGetM(prhs[1]); | 
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|  | 316 | mdata.isrow_p0=0; | 
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|  | 317 | } | 
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|  | 318 | /* copy input parameter vector to avoid destroying it */ | 
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|  | 319 | p=mxMalloc(m*sizeof(double)); | 
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|  | 320 | for(i=0; i<m; ++i) | 
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|  | 321 | p[i]=p0[i]; | 
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|  | 322 |  | 
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|  | 323 | /** x **/ | 
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|  | 324 | /* the third required argument must be a real row or column vector */ | 
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|  | 325 | if(!mxIsDouble(prhs[2]) || mxIsComplex(prhs[2]) || !(mxGetM(prhs[2])==1 || mxGetN(prhs[2])==1)) | 
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|  | 326 | mexErrMsgTxt("levmar: x must be a real vector."); | 
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|  | 327 | x=mxGetPr(prhs[2]); | 
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|  | 328 | n=__MAX__(mxGetM(prhs[2]), mxGetN(prhs[2])); | 
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|  | 329 |  | 
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|  | 330 | /** itmax **/ | 
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|  | 331 | /* the fourth required argument must be a scalar */ | 
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|  | 332 | if(!mxIsDouble(prhs[3]) || mxIsComplex(prhs[3]) || mxGetM(prhs[3])!=1 || mxGetN(prhs[3])!=1) | 
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|  | 333 | mexErrMsgTxt("levmar: itmax must be a scalar."); | 
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|  | 334 | itmax=(int)mxGetScalar(prhs[3]); | 
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|  | 335 |  | 
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|  | 336 | /** opts **/ | 
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|  | 337 | /* the fifth required argument must be a real row or column vector */ | 
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|  | 338 | if(!mxIsDouble(prhs[4]) || mxIsComplex(prhs[4]) || (!(mxGetM(prhs[4])==1 || mxGetN(prhs[4])==1) && | 
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|  | 339 | !(mxGetM(prhs[4])==0 && mxGetN(prhs[4])==0))) | 
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|  | 340 | mexErrMsgTxt("levmar: opts must be a real vector."); | 
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|  | 341 | pdbl=mxGetPr(prhs[4]); | 
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|  | 342 | nopts=__MAX__(mxGetM(prhs[4]), mxGetN(prhs[4])); | 
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|  | 343 | if(nopts!=0){ /* if opts==[], nothing needs to be done and the defaults are used */ | 
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|  | 344 | if(nopts>LM_OPTS_SZ) | 
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|  | 345 | matlabFmtdErrMsgTxt("levmar: opts must have at most %d elements, got %d.", LM_OPTS_SZ, nopts); | 
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|  | 346 | else if(nopts<((havejac)? LM_OPTS_SZ-1 : LM_OPTS_SZ)) | 
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|  | 347 | matlabFmtdWarnMsgTxt("levmar: only the %d first elements of opts specified, remaining set to defaults.", nopts); | 
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|  | 348 | for(i=0; i<nopts; ++i) | 
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|  | 349 | opts[i]=pdbl[i]; | 
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|  | 350 | } | 
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|  | 351 | #ifdef DEBUG | 
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|  | 352 | else{ | 
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|  | 353 | fflush(stderr); | 
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|  | 354 | fprintf(stderr, "LEVMAR: empty options vector, using defaults\n"); | 
|---|
|  | 355 | } | 
|---|
|  | 356 | #endif /* DEBUG */ | 
|---|
|  | 357 |  | 
|---|
|  | 358 | /** mintype (optional) **/ | 
|---|
|  | 359 | /* check whether sixth argument is a string */ | 
|---|
|  | 360 | if(nrhs>=6 && mxIsChar(prhs[5])==1 && mxGetM(prhs[5])==1){ | 
|---|
|  | 361 | char *minhowto; | 
|---|
|  | 362 |  | 
|---|
|  | 363 | /* examine supplied name */ | 
|---|
|  | 364 | len=mxGetN(prhs[5])+1; | 
|---|
|  | 365 | minhowto=mxCalloc(len, sizeof(char)); | 
|---|
|  | 366 | status=mxGetString(prhs[5], minhowto, len); | 
|---|
|  | 367 | if(status!=0) | 
|---|
|  | 368 | mexErrMsgTxt("levmar: not enough space. String is truncated."); | 
|---|
|  | 369 |  | 
|---|
|  | 370 | for(i=0; minhowto[i]; ++i) | 
|---|
|  | 371 | minhowto[i]=tolower(minhowto[i]); | 
|---|
|  | 372 | if(!strncmp(minhowto, "unc", 3)) mintype=MIN_UNCONSTRAINED; | 
|---|
|  | 373 | else if(!strncmp(minhowto, "bc", 2)) mintype=MIN_CONSTRAINED_BC; | 
|---|
|  | 374 | else if(!strncmp(minhowto, "lec", 3)) mintype=MIN_CONSTRAINED_LEC; | 
|---|
|  | 375 | else if(!strncmp(minhowto, "blec", 4)) mintype=MIN_CONSTRAINED_BLEC; | 
|---|
|  | 376 | else if(!strncmp(minhowto, "bleic", 5)) mintype=MIN_CONSTRAINED_BLEIC; | 
|---|
|  | 377 | else if(!strncmp(minhowto, "blic", 4)) mintype=MIN_CONSTRAINED_BLIC; | 
|---|
|  | 378 | else if(!strncmp(minhowto, "leic", 4)) mintype=MIN_CONSTRAINED_LEIC; | 
|---|
|  | 379 | else if(!strncmp(minhowto, "lic", 3)) mintype=MIN_CONSTRAINED_BLIC; | 
|---|
|  | 380 | else matlabFmtdErrMsgTxt("levmar: unknown minimization type '%s'.", minhowto); | 
|---|
|  | 381 |  | 
|---|
|  | 382 | mxFree(minhowto); | 
|---|
|  | 383 |  | 
|---|
|  | 384 | ++prhs; | 
|---|
|  | 385 | --nrhs; | 
|---|
|  | 386 | } | 
|---|
|  | 387 | else | 
|---|
|  | 388 | mintype=MIN_UNCONSTRAINED; | 
|---|
|  | 389 |  | 
|---|
|  | 390 | if(mintype==MIN_UNCONSTRAINED) goto extraargs; | 
|---|
|  | 391 |  | 
|---|
|  | 392 | /* arguments below this point are optional and their presence depends | 
|---|
|  | 393 | * upon the minimization type determined above | 
|---|
|  | 394 | */ | 
|---|
|  | 395 | /** lb, ub **/ | 
|---|
|  | 396 | if(nrhs>=7 && (mintype==MIN_CONSTRAINED_BC || mintype==MIN_CONSTRAINED_BLEC || mintype==MIN_CONSTRAINED_BLIC || mintype==MIN_CONSTRAINED_BLEIC)){ | 
|---|
|  | 397 | /* check if the next two arguments are real row or column vectors */ | 
|---|
|  | 398 | if(mxIsDouble(prhs[5]) && !mxIsComplex(prhs[5]) && (mxGetM(prhs[5])==1 || mxGetN(prhs[5])==1)){ | 
|---|
|  | 399 | if(mxIsDouble(prhs[6]) && !mxIsComplex(prhs[6]) && (mxGetM(prhs[6])==1 || mxGetN(prhs[6])==1)){ | 
|---|
|  | 400 | if((i=__MAX__(mxGetM(prhs[5]), mxGetN(prhs[5])))!=m) | 
|---|
|  | 401 | matlabFmtdErrMsgTxt("levmar: lb must have %d elements, got %d.", m, i); | 
|---|
|  | 402 | if((i=__MAX__(mxGetM(prhs[6]), mxGetN(prhs[6])))!=m) | 
|---|
|  | 403 | matlabFmtdErrMsgTxt("levmar: ub must have %d elements, got %d.", m, i); | 
|---|
|  | 404 |  | 
|---|
|  | 405 | lb=mxGetPr(prhs[5]); | 
|---|
|  | 406 | ub=mxGetPr(prhs[6]); | 
|---|
|  | 407 |  | 
|---|
|  | 408 | prhs+=2; | 
|---|
|  | 409 | nrhs-=2; | 
|---|
|  | 410 | } | 
|---|
|  | 411 | } | 
|---|
|  | 412 | } | 
|---|
|  | 413 |  | 
|---|
|  | 414 | /** dscl **/ | 
|---|
|  | 415 | if(nrhs>=7 && (mintype==MIN_CONSTRAINED_BC)){ | 
|---|
|  | 416 | /* check if the next argument is a real row or column vector */ | 
|---|
|  | 417 | if(mxIsDouble(prhs[5]) && !mxIsComplex(prhs[5]) && (mxGetM(prhs[5])==1 || mxGetN(prhs[5])==1)){ | 
|---|
|  | 418 | if((i=__MAX__(mxGetM(prhs[5]), mxGetN(prhs[5])))!=m) | 
|---|
|  | 419 | matlabFmtdErrMsgTxt("levmar: dscl must have %d elements, got %d.", m, i); | 
|---|
|  | 420 |  | 
|---|
|  | 421 | dscl=mxGetPr(prhs[5]); | 
|---|
|  | 422 |  | 
|---|
|  | 423 | ++prhs; | 
|---|
|  | 424 | --nrhs; | 
|---|
|  | 425 | } | 
|---|
|  | 426 | } | 
|---|
|  | 427 |  | 
|---|
|  | 428 | /** A, b **/ | 
|---|
|  | 429 | if(nrhs>=7 && (mintype==MIN_CONSTRAINED_LEC || mintype==MIN_CONSTRAINED_BLEC || mintype==MIN_CONSTRAINED_LEIC || mintype==MIN_CONSTRAINED_BLEIC)){ | 
|---|
|  | 430 | /* check if the next two arguments are a real matrix and a real row or column vector */ | 
|---|
|  | 431 | if(mxIsDouble(prhs[5]) && !mxIsComplex(prhs[5]) && mxGetM(prhs[5])>=1 && mxGetN(prhs[5])>=1){ | 
|---|
|  | 432 | if(mxIsDouble(prhs[6]) && !mxIsComplex(prhs[6]) && (mxGetM(prhs[6])==1 || mxGetN(prhs[6])==1)){ | 
|---|
|  | 433 | if((i=mxGetN(prhs[5]))!=m) | 
|---|
|  | 434 | matlabFmtdErrMsgTxt("levmar: A must have %d columns, got %d.", m, i); | 
|---|
|  | 435 | if((i=__MAX__(mxGetM(prhs[6]), mxGetN(prhs[6])))!=(Arows=mxGetM(prhs[5]))) | 
|---|
|  | 436 | matlabFmtdErrMsgTxt("levmar: b must have %d elements, got %d.", Arows, i); | 
|---|
|  | 437 |  | 
|---|
|  | 438 | At=prhs[5]; | 
|---|
|  | 439 | b=mxGetPr(prhs[6]); | 
|---|
|  | 440 | A=getTranspose(At); | 
|---|
|  | 441 |  | 
|---|
|  | 442 | prhs+=2; | 
|---|
|  | 443 | nrhs-=2; | 
|---|
|  | 444 | } | 
|---|
|  | 445 | } | 
|---|
|  | 446 | } | 
|---|
|  | 447 |  | 
|---|
|  | 448 | /* wghts */ | 
|---|
|  | 449 | /* check if we have a weights vector */ | 
|---|
|  | 450 | if(nrhs>=6 && mintype==MIN_CONSTRAINED_BLEC){ /* only check if we have seen both box & linear constraints */ | 
|---|
|  | 451 | if(mxIsDouble(prhs[5]) && !mxIsComplex(prhs[5]) && (mxGetM(prhs[5])==1 || mxGetN(prhs[5])==1)){ | 
|---|
|  | 452 | if(__MAX__(mxGetM(prhs[5]), mxGetN(prhs[5]))==m){ | 
|---|
|  | 453 | wghts=mxGetPr(prhs[5]); | 
|---|
|  | 454 |  | 
|---|
|  | 455 | ++prhs; | 
|---|
|  | 456 | --nrhs; | 
|---|
|  | 457 | } | 
|---|
|  | 458 | } | 
|---|
|  | 459 | } | 
|---|
|  | 460 |  | 
|---|
|  | 461 | /** C, d **/ | 
|---|
|  | 462 | if(nrhs>=7 && (mintype==MIN_CONSTRAINED_BLEIC || mintype==MIN_CONSTRAINED_BLIC || mintype==MIN_CONSTRAINED_LEIC || mintype==MIN_CONSTRAINED_LIC)){ | 
|---|
|  | 463 | /* check if the next two arguments are a real matrix and a real row or column vector */ | 
|---|
|  | 464 | if(mxIsDouble(prhs[5]) && !mxIsComplex(prhs[5]) && mxGetM(prhs[5])>=1 && mxGetN(prhs[5])>=1){ | 
|---|
|  | 465 | if(mxIsDouble(prhs[6]) && !mxIsComplex(prhs[6]) && (mxGetM(prhs[6])==1 || mxGetN(prhs[6])==1)){ | 
|---|
|  | 466 | if((i=mxGetN(prhs[5]))!=m) | 
|---|
|  | 467 | matlabFmtdErrMsgTxt("levmar: C must have %d columns, got %d.", m, i); | 
|---|
|  | 468 | if((i=__MAX__(mxGetM(prhs[6]), mxGetN(prhs[6])))!=(Crows=mxGetM(prhs[5]))) | 
|---|
|  | 469 | matlabFmtdErrMsgTxt("levmar: d must have %d elements, got %d.", Crows, i); | 
|---|
|  | 470 |  | 
|---|
|  | 471 | Ct=prhs[5]; | 
|---|
|  | 472 | d=mxGetPr(prhs[6]); | 
|---|
|  | 473 | C=getTranspose(Ct); | 
|---|
|  | 474 |  | 
|---|
|  | 475 | prhs+=2; | 
|---|
|  | 476 | nrhs-=2; | 
|---|
|  | 477 | } | 
|---|
|  | 478 | } | 
|---|
|  | 479 | } | 
|---|
|  | 480 |  | 
|---|
|  | 481 | /* arguments below this point are assumed to be extra arguments passed | 
|---|
|  | 482 | * to every invocation of the fitting function and its Jacobian | 
|---|
|  | 483 | */ | 
|---|
|  | 484 |  | 
|---|
|  | 485 | extraargs: | 
|---|
|  | 486 | /* handle any extra args and allocate memory for | 
|---|
|  | 487 | * passing the current parameter estimate to matlab | 
|---|
|  | 488 | */ | 
|---|
|  | 489 | nextra=nrhs-5; | 
|---|
|  | 490 | mdata.nrhs=nextra+1; | 
|---|
|  | 491 | mdata.rhs=(mxArray **)mxMalloc(mdata.nrhs*sizeof(mxArray *)); | 
|---|
|  | 492 | for(i=0; i<nextra; ++i) | 
|---|
|  | 493 | mdata.rhs[i+1]=(mxArray *)prhs[nrhs-nextra+i]; /* discard 'const' modifier */ | 
|---|
|  | 494 | #ifdef DEBUG | 
|---|
|  | 495 | fflush(stderr); | 
|---|
|  | 496 | fprintf(stderr, "LEVMAR: %d extra args\n", nextra); | 
|---|
|  | 497 | #endif /* DEBUG */ | 
|---|
|  | 498 |  | 
|---|
|  | 499 | if(mdata.isrow_p0){ /* row vector */ | 
|---|
|  | 500 | mdata.rhs[0]=mxCreateDoubleMatrix(1, m, mxREAL); | 
|---|
|  | 501 | /* | 
|---|
|  | 502 | mxSetM(mdata.rhs[0], 1); | 
|---|
|  | 503 | mxSetN(mdata.rhs[0], m); | 
|---|
|  | 504 | */ | 
|---|
|  | 505 | } | 
|---|
|  | 506 | else{ /* column vector */ | 
|---|
|  | 507 | mdata.rhs[0]=mxCreateDoubleMatrix(m, 1, mxREAL); | 
|---|
|  | 508 | /* | 
|---|
|  | 509 | mxSetM(mdata.rhs[0], m); | 
|---|
|  | 510 | mxSetN(mdata.rhs[0], 1); | 
|---|
|  | 511 | */ | 
|---|
|  | 512 | } | 
|---|
|  | 513 |  | 
|---|
|  | 514 | /* ensure that the supplied function & Jacobian are as expected */ | 
|---|
|  | 515 | if(checkFuncAndJacobian(p, m, n, havejac, &mdata)){ | 
|---|
|  | 516 | status=LM_ERROR; | 
|---|
|  | 517 | goto cleanup; | 
|---|
|  | 518 | } | 
|---|
|  | 519 |  | 
|---|
|  | 520 | if(nlhs>3) /* covariance output required */ | 
|---|
|  | 521 | covar=mxMalloc(m*m*sizeof(double)); | 
|---|
|  | 522 |  | 
|---|
|  | 523 | /* invoke levmar */ | 
|---|
|  | 524 | switch(mintype){ | 
|---|
|  | 525 | case MIN_UNCONSTRAINED: /* no constraints */ | 
|---|
|  | 526 | if(havejac) | 
|---|
|  | 527 | status=dlevmar_der(func, jacfunc, p, x, m, n, itmax, opts, info, NULL, covar, (void *)&mdata); | 
|---|
|  | 528 | else | 
|---|
|  | 529 | status=dlevmar_dif(func,          p, x, m, n, itmax, opts, info, NULL, covar, (void *)&mdata); | 
|---|
|  | 530 | #ifdef DEBUG | 
|---|
|  | 531 | fflush(stderr); | 
|---|
|  | 532 | fprintf(stderr, "LEVMAR: calling dlevmar_der()/dlevmar_dif()\n"); | 
|---|
|  | 533 | #endif /* DEBUG */ | 
|---|
|  | 534 | break; | 
|---|
|  | 535 | case MIN_CONSTRAINED_BC: /* box constraints */ | 
|---|
|  | 536 | if(havejac) | 
|---|
|  | 537 | status=dlevmar_bc_der(func, jacfunc, p, x, m, n, lb, ub, dscl, itmax, opts, info, NULL, covar, (void *)&mdata); | 
|---|
|  | 538 | else | 
|---|
|  | 539 | status=dlevmar_bc_dif(func,          p, x, m, n, lb, ub, dscl, itmax, opts, info, NULL, covar, (void *)&mdata); | 
|---|
|  | 540 | #ifdef DEBUG | 
|---|
|  | 541 | fflush(stderr); | 
|---|
|  | 542 | fprintf(stderr, "LEVMAR: calling dlevmar_bc_der()/dlevmar_bc_dif()\n"); | 
|---|
|  | 543 | #endif /* DEBUG */ | 
|---|
|  | 544 | break; | 
|---|
|  | 545 | case MIN_CONSTRAINED_LEC:  /* linear equation constraints */ | 
|---|
|  | 546 | #ifdef HAVE_LAPACK | 
|---|
|  | 547 | if(havejac) | 
|---|
|  | 548 | status=dlevmar_lec_der(func, jacfunc, p, x, m, n, A, b, Arows, itmax, opts, info, NULL, covar, (void *)&mdata); | 
|---|
|  | 549 | else | 
|---|
|  | 550 | status=dlevmar_lec_dif(func,          p, x, m, n, A, b, Arows, itmax, opts, info, NULL, covar, (void *)&mdata); | 
|---|
|  | 551 | #else | 
|---|
|  | 552 | mexErrMsgTxt("levmar: no linear constraints support, HAVE_LAPACK was not defined during MEX-file compilation."); | 
|---|
|  | 553 | #endif /* HAVE_LAPACK */ | 
|---|
|  | 554 |  | 
|---|
|  | 555 | #ifdef DEBUG | 
|---|
|  | 556 | fflush(stderr); | 
|---|
|  | 557 | fprintf(stderr, "LEVMAR: calling dlevmar_lec_der()/dlevmar_lec_dif()\n"); | 
|---|
|  | 558 | #endif /* DEBUG */ | 
|---|
|  | 559 | break; | 
|---|
|  | 560 | case MIN_CONSTRAINED_BLEC: /* box & linear equation constraints */ | 
|---|
|  | 561 | #ifdef HAVE_LAPACK | 
|---|
|  | 562 | if(havejac) | 
|---|
|  | 563 | status=dlevmar_blec_der(func, jacfunc, p, x, m, n, lb, ub, A, b, Arows, wghts, itmax, opts, info, NULL, covar, (void *)&mdata); | 
|---|
|  | 564 | else | 
|---|
|  | 565 | status=dlevmar_blec_dif(func,          p, x, m, n, lb, ub, A, b, Arows, wghts, itmax, opts, info, NULL, covar, (void *)&mdata); | 
|---|
|  | 566 | #else | 
|---|
|  | 567 | mexErrMsgTxt("levmar: no box & linear constraints support, HAVE_LAPACK was not defined during MEX-file compilation."); | 
|---|
|  | 568 | #endif /* HAVE_LAPACK */ | 
|---|
|  | 569 |  | 
|---|
|  | 570 | #ifdef DEBUG | 
|---|
|  | 571 | fflush(stderr); | 
|---|
|  | 572 | fprintf(stderr, "LEVMAR: calling dlevmar_blec_der()/dlevmar_blec_dif()\n"); | 
|---|
|  | 573 | #endif /* DEBUG */ | 
|---|
|  | 574 | break; | 
|---|
|  | 575 | case MIN_CONSTRAINED_BLEIC: /* box, linear equation & inequalities constraints */ | 
|---|
|  | 576 | #ifdef HAVE_LAPACK | 
|---|
|  | 577 | if(havejac) | 
|---|
|  | 578 | status=dlevmar_bleic_der(func, jacfunc, p, x, m, n, lb, ub, A, b, Arows, C, d, Crows, itmax, opts, info, NULL, covar, (void *)&mdata); | 
|---|
|  | 579 | else | 
|---|
|  | 580 | status=dlevmar_bleic_dif(func, p, x, m, n, lb, ub, A, b, Arows, C, d, Crows, itmax, opts, info, NULL, covar, (void *)&mdata); | 
|---|
|  | 581 | #else | 
|---|
|  | 582 | mexErrMsgTxt("levmar: no box, linear equation & inequality constraints support, HAVE_LAPACK was not defined during MEX-file compilation."); | 
|---|
|  | 583 | #endif /* HAVE_LAPACK */ | 
|---|
|  | 584 |  | 
|---|
|  | 585 | #ifdef DEBUG | 
|---|
|  | 586 | fflush(stderr); | 
|---|
|  | 587 | fprintf(stderr, "LEVMAR: calling dlevmar_bleic_der()/dlevmar_bleic_dif()\n"); | 
|---|
|  | 588 | #endif /* DEBUG */ | 
|---|
|  | 589 | break; | 
|---|
|  | 590 | case MIN_CONSTRAINED_BLIC: /* box, linear inequalities constraints */ | 
|---|
|  | 591 | #ifdef HAVE_LAPACK | 
|---|
|  | 592 | if(havejac) | 
|---|
|  | 593 | status=dlevmar_bleic_der(func, jacfunc, p, x, m, n, lb, ub, NULL, NULL, 0, C, d, Crows, itmax, opts, info, NULL, covar, (void *)&mdata); | 
|---|
|  | 594 | else | 
|---|
|  | 595 | status=dlevmar_bleic_dif(func, p, x, m, n, lb, ub, NULL, NULL, 0, C, d, Crows, itmax, opts, info, NULL, covar, (void *)&mdata); | 
|---|
|  | 596 | #else | 
|---|
|  | 597 | mexErrMsgTxt("levmar: no box & linear inequality constraints support, HAVE_LAPACK was not defined during MEX-file compilation."); | 
|---|
|  | 598 | #endif /* HAVE_LAPACK */ | 
|---|
|  | 599 |  | 
|---|
|  | 600 | #ifdef DEBUG | 
|---|
|  | 601 | fflush(stderr); | 
|---|
|  | 602 | fprintf(stderr, "LEVMAR: calling dlevmar_blic_der()/dlevmar_blic_dif()\n"); | 
|---|
|  | 603 | #endif /* DEBUG */ | 
|---|
|  | 604 | break; | 
|---|
|  | 605 | case MIN_CONSTRAINED_LEIC: /* linear equation & inequalities constraints */ | 
|---|
|  | 606 | #ifdef HAVE_LAPACK | 
|---|
|  | 607 | if(havejac) | 
|---|
|  | 608 | status=dlevmar_bleic_der(func, jacfunc, p, x, m, n, NULL, NULL, A, b, Arows, C, d, Crows, itmax, opts, info, NULL, covar, (void *)&mdata); | 
|---|
|  | 609 | else | 
|---|
|  | 610 | status=dlevmar_bleic_dif(func, p, x, m, n, NULL, NULL, A, b, Arows, C, d, Crows, itmax, opts, info, NULL, covar, (void *)&mdata); | 
|---|
|  | 611 | #else | 
|---|
|  | 612 | mexErrMsgTxt("levmar: no linear equation & inequality constraints support, HAVE_LAPACK was not defined during MEX-file compilation."); | 
|---|
|  | 613 | #endif /* HAVE_LAPACK */ | 
|---|
|  | 614 |  | 
|---|
|  | 615 | #ifdef DEBUG | 
|---|
|  | 616 | fflush(stderr); | 
|---|
|  | 617 | fprintf(stderr, "LEVMAR: calling dlevmar_leic_der()/dlevmar_leic_dif()\n"); | 
|---|
|  | 618 | #endif /* DEBUG */ | 
|---|
|  | 619 | break; | 
|---|
|  | 620 | case MIN_CONSTRAINED_LIC: /* linear inequalities constraints */ | 
|---|
|  | 621 | #ifdef HAVE_LAPACK | 
|---|
|  | 622 | if(havejac) | 
|---|
|  | 623 | status=dlevmar_bleic_der(func, jacfunc, p, x, m, n, NULL, NULL, NULL, NULL, 0, C, d, Crows, itmax, opts, info, NULL, covar, (void *)&mdata); | 
|---|
|  | 624 | else | 
|---|
|  | 625 | status=dlevmar_bleic_dif(func, p, x, m, n, NULL, NULL, NULL, NULL, 0, C, d, Crows, itmax, opts, info, NULL, covar, (void *)&mdata); | 
|---|
|  | 626 | #else | 
|---|
|  | 627 | mexErrMsgTxt("levmar: no linear equation & inequality constraints support, HAVE_LAPACK was not defined during MEX-file compilation."); | 
|---|
|  | 628 | #endif /* HAVE_LAPACK */ | 
|---|
|  | 629 |  | 
|---|
|  | 630 | #ifdef DEBUG | 
|---|
|  | 631 | fflush(stderr); | 
|---|
|  | 632 | fprintf(stderr, "LEVMAR: calling dlevmar_lic_der()/dlevmar_lic_dif()\n"); | 
|---|
|  | 633 | #endif /* DEBUG */ | 
|---|
|  | 634 | break; | 
|---|
|  | 635 | default: | 
|---|
|  | 636 | mexErrMsgTxt("levmar: unexpected internal error."); | 
|---|
|  | 637 | } | 
|---|
|  | 638 |  | 
|---|
|  | 639 | #ifdef DEBUG | 
|---|
|  | 640 | fflush(stderr); | 
|---|
|  | 641 | printf("LEVMAR: minimization returned %d in %g iter, reason %g\n\tSolution: ", status, info[5], info[6]); | 
|---|
|  | 642 | for(i=0; i<m; ++i) | 
|---|
|  | 643 | printf("%.7g ", p[i]); | 
|---|
|  | 644 | printf("\n\n\tMinimization info:\n\t"); | 
|---|
|  | 645 | for(i=0; i<LM_INFO_SZ; ++i) | 
|---|
|  | 646 | printf("%g ", info[i]); | 
|---|
|  | 647 | printf("\n"); | 
|---|
|  | 648 | #endif /* DEBUG */ | 
|---|
|  | 649 |  | 
|---|
|  | 650 | /* copy back return results */ | 
|---|
|  | 651 | /** ret **/ | 
|---|
|  | 652 | plhs[0]=mxCreateDoubleMatrix(1, 1, mxREAL); | 
|---|
|  | 653 | ret=mxGetPr(plhs[0]); | 
|---|
|  | 654 | ret[0]=(double)status; | 
|---|
|  | 655 |  | 
|---|
|  | 656 | /** popt **/ | 
|---|
|  | 657 | plhs[1]=(mdata.isrow_p0==1)? mxCreateDoubleMatrix(1, m, mxREAL) : mxCreateDoubleMatrix(m, 1, mxREAL); | 
|---|
|  | 658 | pdbl=mxGetPr(plhs[1]); | 
|---|
|  | 659 | for(i=0; i<m; ++i) | 
|---|
|  | 660 | pdbl[i]=p[i]; | 
|---|
|  | 661 |  | 
|---|
|  | 662 | /** info **/ | 
|---|
|  | 663 | if(nlhs>2){ | 
|---|
|  | 664 | plhs[2]=mxCreateDoubleMatrix(1, LM_INFO_SZ, mxREAL); | 
|---|
|  | 665 | pdbl=mxGetPr(plhs[2]); | 
|---|
|  | 666 | for(i=0; i<LM_INFO_SZ; ++i) | 
|---|
|  | 667 | pdbl[i]=info[i]; | 
|---|
|  | 668 | } | 
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|  | 669 |  | 
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|  | 670 | /** covar **/ | 
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|  | 671 | if(nlhs>3){ | 
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|  | 672 | plhs[3]=mxCreateDoubleMatrix(m, m, mxREAL); | 
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|  | 673 | pdbl=mxGetPr(plhs[3]); | 
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|  | 674 | for(i=0; i<m*m; ++i) /* covariance matrices are symmetric, thus no need to transpose! */ | 
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|  | 675 | pdbl[i]=covar[i]; | 
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|  | 676 | } | 
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|  | 677 |  | 
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|  | 678 | cleanup: | 
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|  | 679 | /* cleanup */ | 
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|  | 680 | mxDestroyArray(mdata.rhs[0]); | 
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|  | 681 | if(A) mxFree(A); | 
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|  | 682 | if(C) mxFree(C); | 
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|  | 683 |  | 
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|  | 684 | mxFree(mdata.fname); | 
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|  | 685 | if(havejac) mxFree(mdata.jacname); | 
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|  | 686 | mxFree(p); | 
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|  | 687 | mxFree(mdata.rhs); | 
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|  | 688 | if(covar) mxFree(covar); | 
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|  | 689 |  | 
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|  | 690 | if(status==LM_ERROR) | 
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|  | 691 | mexWarnMsgTxt("levmar: optimization returned with an error!"); | 
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|  | 692 | } | 
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