| [bcf653] | 1 | /*
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 | 2 |  * Project: MoleCuilder
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 | 3 |  * Description: creates and alters molecular systems
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 | 4 |  * Copyright (C)  2010 University of Bonn. All rights reserved.
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 | 5 |  * Please see the LICENSE file or "Copyright notice" in builder.cpp for details.
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 | 6 |  */
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 | 7 | 
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| [fc3b67] | 8 | /*
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| [fff54f] | 9 |  * MatrixContentSymmetricUnitTest.cpp
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| [fc3b67] | 10 |  *
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 | 11 |  *  Created on: Jan 8, 2010
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 | 12 |  *      Author: heber
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 | 13 |  */
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 | 14 | 
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| [bf3817] | 15 | // include config.h
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 | 16 | #ifdef HAVE_CONFIG_H
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 | 17 | #include <config.h>
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 | 18 | #endif
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 | 19 | 
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| [fc3b67] | 20 | using namespace std;
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 | 21 | 
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 | 22 | #include <cppunit/CompilerOutputter.h>
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 | 23 | #include <cppunit/extensions/TestFactoryRegistry.h>
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 | 24 | #include <cppunit/ui/text/TestRunner.h>
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 | 25 | 
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| [fff54f] | 26 | #include "MatrixContentSymmetricUnitTest.hpp"
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| [0d4424] | 27 | 
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| [bf4b9f] | 28 | #include "MatrixContent.hpp"
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| [fc3b67] | 29 | 
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| [9b6b2f] | 30 | #ifdef HAVE_TESTRUNNER
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 | 31 | #include "UnitTestMain.hpp"
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 | 32 | #endif /*HAVE_TESTRUNNER*/
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 | 33 | 
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| [fc3b67] | 34 | /********************************************** Test classes **************************************/
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 | 35 | 
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 | 36 | // Registers the fixture into the 'registry'
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| [0d4424] | 37 | CPPUNIT_TEST_SUITE_REGISTRATION( MatrixContentSymmetricTest );
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| [fc3b67] | 38 | 
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 | 39 | 
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| [0d4424] | 40 | void MatrixContentSymmetricTest::setUp()
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| [fc3b67] | 41 | {
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| [0d4424] | 42 |   m = new MatrixContent(3,3);
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| [fc3b67] | 43 | };
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 | 44 | 
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| [0d4424] | 45 | void MatrixContentSymmetricTest::tearDown()
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| [fc3b67] | 46 | {
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 | 47 |   delete(m);
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 | 48 | };
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 | 49 | 
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 | 50 | /** Unit Test for accessing matrix elements.
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 | 51 |  *
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 | 52 |  */
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| [0d4424] | 53 | void MatrixContentSymmetricTest::AccessTest()
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| [fc3b67] | 54 | {
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 | 55 |   // check whether all elements are initially zero
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 | 56 |   for (int i=0;i<3;i++)
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 | 57 |     for (int j=0;j<3;j++)
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| [0d4424] | 58 |       CPPUNIT_ASSERT_EQUAL( 0., m->at(i,j) );
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| [fc3b67] | 59 | 
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 | 60 |   // set
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 | 61 |   for (int i=0;i<3;i++)
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 | 62 |     for (int j=0;j<3;j++)
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| [0d4424] | 63 |       m->set(i,j, i*3+j );
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| [fc3b67] | 64 | 
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 | 65 |   // and check
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 | 66 |   double *ptr = NULL;
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 | 67 |   for (int i=0;i<3;i++)
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 | 68 |     for (int j=0;j<3;j++) {
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| [0d4424] | 69 |       CPPUNIT_ASSERT_EQUAL( (double)(i*3+j), m->at(i,j) );
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| [fc3b67] | 70 |       ptr = m->Pointer(i,j);
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 | 71 |       CPPUNIT_ASSERT_EQUAL( (double)(i*3+j), *ptr );
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 | 72 |     }
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 | 73 | 
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 | 74 |   // assignment
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 | 75 |   for (int i=0;i<3;i++)
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 | 76 |     for (int j=0;j<3;j++)
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| [0d4424] | 77 |       m->set(i,j, i*3+j );
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 | 78 |   MatrixContent *dest = new MatrixContent(3,3);
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| [fc3b67] | 79 |   *dest = *m;
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 | 80 |   for (int i=0;i<3;i++)
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 | 81 |     for (int j=0;j<3;j++)
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| [0d4424] | 82 |       CPPUNIT_ASSERT_EQUAL( dest->at(i,j), m->at(i,j) );
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| [fc3b67] | 83 |   delete(dest);
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 | 84 | 
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 | 85 |   // out of bounds
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| [0d4424] | 86 |   //CPPUNIT_ASSERT_EQUAL(0., v->at(4,2) );
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 | 87 |   //CPPUNIT_ASSERT_EQUAL(0., v->at(2,17) );
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 | 88 |   //CPPUNIT_ASSERT_EQUAL(0., v->at(1024,140040) );
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 | 89 |   //CPPUNIT_ASSERT_EQUAL(0., v->at(-1,0) );
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 | 90 |   //CPPUNIT_ASSERT_EQUAL(0., v->at(0,-1) );
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 | 91 |   //CPPUNIT_ASSERT_EQUAL(0., v->at(-1,-1) );
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| [fc3b67] | 92 | };
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 | 93 | 
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 | 94 | /** Unit Test for initializating matrices.
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 | 95 |  *
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 | 96 |  */
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| [0d4424] | 97 | void MatrixContentSymmetricTest::InitializationTest()
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| [fc3b67] | 98 | {
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 | 99 |   // set zero
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| [0d4424] | 100 |   m->setZero();
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| [fc3b67] | 101 |   for (int i=0;i<3;i++)
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 | 102 |     for (int j=0;j<3;j++)
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| [0d4424] | 103 |       CPPUNIT_ASSERT_EQUAL( 0., m->at(i,j) );
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| [fc3b67] | 104 | 
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 | 105 |   // set all
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| [0d4424] | 106 |   m->setValue(1.5);
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| [fc3b67] | 107 |   for (int i=0;i<3;i++)
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 | 108 |     for (int j=0;j<3;j++)
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| [0d4424] | 109 |       CPPUNIT_ASSERT_EQUAL( 1.5, m->at(i,j) );
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| [fc3b67] | 110 | 
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 | 111 |   // set basis
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| [0d4424] | 112 |   m->setIdentity();
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| [fc3b67] | 113 |   for (int i=0;i<3;i++)
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 | 114 |     for (int j=0;j<3;j++)
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| [0d4424] | 115 |       CPPUNIT_ASSERT_EQUAL( i == j ? 1. : 0. , m->at(i,j) );
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| [fc3b67] | 116 | 
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 | 117 |   // set from array
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 | 118 |   double array[] = { 1., 0., 0.,
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 | 119 |                      0., 1., 0.,
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 | 120 |                      0., 0., 1. };
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| [0d4424] | 121 |   m->setFromDoubleArray(array);
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| [fc3b67] | 122 |   for (int i=0;i<3;i++)
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 | 123 |     for (int j=0;j<3;j++)
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| [0d4424] | 124 |       CPPUNIT_ASSERT_EQUAL( i == j ? 1. : 0. , m->at(i,j) );
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| [fc3b67] | 125 | 
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 | 126 | };
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 | 127 | 
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 | 128 | /** Unit Test for copying matrices.
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 | 129 |  *
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 | 130 |  */
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| [0d4424] | 131 | void MatrixContentSymmetricTest::CopyTest()
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| [fc3b67] | 132 | {
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 | 133 |   // set basis
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| [0d4424] | 134 |   MatrixContent *dest = NULL;
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| [fc3b67] | 135 |   for (int i=0;i<3;i++) {
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| [0d4424] | 136 |     m->setValue(i);
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 | 137 |     dest = new MatrixContent(m);
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| [fc3b67] | 138 |     for (int j=0;j<3;j++)
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| [0d4424] | 139 |       CPPUNIT_ASSERT_EQUAL( m->at(i,j) , dest->at(i,j) );
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| [fc3b67] | 140 | 
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 | 141 |     delete(dest);
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 | 142 |   }
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 | 143 | };
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 | 144 | 
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 | 145 | /** Unit Test for exchanging rows and columns.
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 | 146 |  *
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 | 147 |  */
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| [0d4424] | 148 | void MatrixContentSymmetricTest::ExchangeTest()
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| [fc3b67] | 149 | {
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 | 150 |   // set to 1,1,1,2, ...
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 | 151 |   for (int i=0;i<3;i++)
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 | 152 |     for (int j=0;j<3;j++)
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| [0d4424] | 153 |       m->set(i,j, i+1 );
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| [fc3b67] | 154 | 
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 | 155 |   // swap such that nothing happens
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 | 156 |   m->SwapColumns(1,2);
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 | 157 |   for (int i=0;i<3;i++)
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 | 158 |     for (int j=0;j<3;j++)
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| [0d4424] | 159 |       CPPUNIT_ASSERT_EQUAL( (double)i+1., m->at(i,j) );
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| [fc3b67] | 160 | 
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 | 161 |   // swap two rows
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 | 162 |   m->SwapRows(1,2);
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 | 163 |   for (int i=0;i<3;i++)
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 | 164 |     for (int j=0;j<3;j++)
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 | 165 |       switch (j) {
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 | 166 |         case 0:
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| [0d4424] | 167 |           CPPUNIT_ASSERT_EQUAL( 1., m->at(j,i) );
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| [fc3b67] | 168 |           break;
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 | 169 |         case 1:
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| [0d4424] | 170 |           CPPUNIT_ASSERT_EQUAL( 3., m->at(j,i) );
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| [fc3b67] | 171 |           break;
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 | 172 |         case 2:
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| [0d4424] | 173 |           CPPUNIT_ASSERT_EQUAL( 2., m->at(j,i) );
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| [fc3b67] | 174 |           break;
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 | 175 |         default:
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| [0d4424] | 176 |           CPPUNIT_ASSERT_EQUAL( -1., m->at(i,j) );
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| [fc3b67] | 177 |       }
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 | 178 |   // check that op is reversable
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 | 179 |   m->SwapRows(1,2);
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 | 180 |   for (int i=0;i<3;i++)
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 | 181 |     for (int j=0;j<3;j++)
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| [0d4424] | 182 |       CPPUNIT_ASSERT_EQUAL( (double)i+1., m->at(i,j) );
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| [fc3b67] | 183 | 
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 | 184 |   // set to 1,2,3,1, ...
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 | 185 |   for (int i=0;i<3;i++)
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 | 186 |     for (int j=0;j<3;j++)
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| [0d4424] | 187 |       m->set(i,j, j+1. );
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| [fc3b67] | 188 | 
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 | 189 |   // swap such that nothing happens
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 | 190 |   m->SwapRows(0,2);
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 | 191 |   for (int i=0;i<3;i++)
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 | 192 |     for (int j=0;j<3;j++)
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| [0d4424] | 193 |       CPPUNIT_ASSERT_EQUAL( (double)j+1., m->at(i,j) );
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| [fc3b67] | 194 | 
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 | 195 |   // swap two columns
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 | 196 |   m->SwapColumns(0,2);
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 | 197 |   for (int i=0;i<3;i++)
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 | 198 |     for (int j=0;j<3;j++)
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 | 199 |       switch (j) {
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 | 200 |         case 0:
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| [0d4424] | 201 |           CPPUNIT_ASSERT_EQUAL( 3., m->at(i,j) );
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| [fc3b67] | 202 |           break;
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 | 203 |         case 1:
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| [0d4424] | 204 |           CPPUNIT_ASSERT_EQUAL( 2., m->at(i,j) );
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| [fc3b67] | 205 |           break;
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 | 206 |         case 2:
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| [0d4424] | 207 |           CPPUNIT_ASSERT_EQUAL( 1., m->at(i,j) );
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| [fc3b67] | 208 |           break;
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 | 209 |         default:
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| [0d4424] | 210 |           CPPUNIT_ASSERT_EQUAL( -1., m->at(i,j) );
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| [fc3b67] | 211 |       }
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 | 212 |   // check that op is reversable
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 | 213 |   m->SwapColumns(0,2);
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 | 214 |   for (int i=0;i<3;i++)
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 | 215 |     for (int j=0;j<3;j++)
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| [0d4424] | 216 |       CPPUNIT_ASSERT_EQUAL( (double)j+1., m->at(i,j) );
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| [fc3b67] | 217 | 
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 | 218 | 
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| [0d4424] | 219 |   // set to 1,2,3, ...
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 | 220 |   MatrixContent *n =  new MatrixContent(3,3);
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| [fc3b67] | 221 |   for (int i=0;i<3;i++)
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| [0d4424] | 222 |     for (int j=0;j<3;j++) {
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 | 223 |       m->set(i,j, 3*i+j+1 );
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 | 224 |       n->set(i,j, 3*j+i+1 );
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 | 225 |     }
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| [fc3b67] | 226 |   // transpose
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| [0d4424] | 227 |   MatrixContent res = ((const MatrixContent)*m).transpose();
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 | 228 |   CPPUNIT_ASSERT( *n == res );
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| [fc3b67] | 229 |   // second transpose
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| [0d4424] | 230 |   res.transpose();
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 | 231 |   CPPUNIT_ASSERT( *m == res );
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| [bbf1bd] | 232 |   delete n;
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| [fc3b67] | 233 | };
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 | 234 | 
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 | 235 | /** Unit Test for matrix properties.
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 | 236 |  *
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 | 237 |  */
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| [0d4424] | 238 | void MatrixContentSymmetricTest::PropertiesTest()
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| [fc3b67] | 239 | {
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 | 240 |   // is zero
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| [0d4424] | 241 |   m->setZero();
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| [fc3b67] | 242 |   CPPUNIT_ASSERT_EQUAL( true, m->IsNull() );
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 | 243 |   CPPUNIT_ASSERT_EQUAL( false, m->IsPositive() );
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 | 244 |   CPPUNIT_ASSERT_EQUAL( false, m->IsNegative() );
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 | 245 |   CPPUNIT_ASSERT_EQUAL( true, m->IsNonNegative() );
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 | 246 | 
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 | 247 |   // is positive
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| [0d4424] | 248 |   m->setValue(0.5);
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| [fc3b67] | 249 |   CPPUNIT_ASSERT_EQUAL( false, m->IsNull() );
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 | 250 |   CPPUNIT_ASSERT_EQUAL( true, m->IsPositive() );
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 | 251 |   CPPUNIT_ASSERT_EQUAL( false, m->IsNegative() );
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 | 252 |   CPPUNIT_ASSERT_EQUAL( true, m->IsNonNegative() );
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 | 253 | 
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 | 254 |   // is negative
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| [0d4424] | 255 |   m->setValue(-0.1);
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| [fc3b67] | 256 |   CPPUNIT_ASSERT_EQUAL( false, m->IsNull() );
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 | 257 |   CPPUNIT_ASSERT_EQUAL( false, m->IsPositive() );
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 | 258 |   CPPUNIT_ASSERT_EQUAL( true, m->IsNegative() );
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 | 259 |   CPPUNIT_ASSERT_EQUAL( false, m->IsNonNegative() );
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 | 260 | 
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 | 261 |   // is positive definite
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 | 262 |   double array[] = { 1., 0., 0.,
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 | 263 |                      0., 1., 1.,
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 | 264 |                      0., 0., 1. };
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| [0d4424] | 265 |   m->setFromDoubleArray(array);
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| [fc3b67] | 266 |   CPPUNIT_ASSERT_EQUAL( true, m->IsPositiveDefinite() );
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| [865272f] | 267 | 
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 | 268 |   //determinant
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| [0d4424] | 269 |   m->setIdentity();
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| [865272f] | 270 |   CPPUNIT_ASSERT_EQUAL( 1., m->Determinant() );
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 | 271 | 
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| [0d4424] | 272 |   m->setZero();
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| [865272f] | 273 |   CPPUNIT_ASSERT_EQUAL( 0., m->Determinant() );
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 | 274 | 
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| [0d4424] | 275 |   m->set( 0, 0, 1.);
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 | 276 |   m->set( 1, 1, 1.);
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 | 277 |   m->set( 2, 1, 1.);
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| [865272f] | 278 |   CPPUNIT_ASSERT_EQUAL( 0., m->Determinant() );
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 | 279 |   
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 | 280 |   double array2[] = { 2., 0., 1.,
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 | 281 |                      -3., 1., 1.,
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 | 282 |                      1., 5.5, 1. };
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| [0d4424] | 283 |   m->setFromDoubleArray(array2);
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| [865272f] | 284 |   CPPUNIT_ASSERT_EQUAL( -26.5, m->Determinant() );
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| [fc3b67] | 285 | };
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