source: LinearAlgebra/configure.ac@ 74459a

Action_Thermostats Add_AtomRandomPerturbation Add_FitFragmentPartialChargesAction Add_RotateAroundBondAction Add_SelectAtomByNameAction Added_ParseSaveFragmentResults AddingActions_SaveParseParticleParameters Adding_Graph_to_ChangeBondActions Adding_MD_integration_tests Adding_ParticleName_to_Atom Adding_StructOpt_integration_tests AtomFragments Automaking_mpqc_open AutomationFragmentation_failures Candidate_v1.5.4 Candidate_v1.6.0 Candidate_v1.6.1 ChangeBugEmailaddress ChangingTestPorts ChemicalSpaceEvaluator CombiningParticlePotentialParsing Combining_Subpackages Debian_Package_split Debian_package_split_molecuildergui_only Disabling_MemDebug Docu_Python_wait EmpiricalPotential_contain_HomologyGraph EmpiricalPotential_contain_HomologyGraph_documentation Enable_parallel_make_install Enhance_userguide Enhanced_StructuralOptimization Enhanced_StructuralOptimization_continued Example_ManyWaysToTranslateAtom Exclude_Hydrogens_annealWithBondGraph FitPartialCharges_GlobalError Fix_BoundInBox_CenterInBox_MoleculeActions Fix_ChargeSampling_PBC Fix_ChronosMutex Fix_FitPartialCharges Fix_FitPotential_needs_atomicnumbers Fix_ForceAnnealing Fix_IndependentFragmentGrids Fix_ParseParticles Fix_ParseParticles_split_forward_backward_Actions Fix_PopActions Fix_QtFragmentList_sorted_selection Fix_Restrictedkeyset_FragmentMolecule Fix_StatusMsg Fix_StepWorldTime_single_argument Fix_Verbose_Codepatterns Fix_fitting_potentials Fixes ForceAnnealing_goodresults ForceAnnealing_oldresults ForceAnnealing_tocheck ForceAnnealing_with_BondGraph ForceAnnealing_with_BondGraph_continued ForceAnnealing_with_BondGraph_continued_betteresults ForceAnnealing_with_BondGraph_contraction-expansion FragmentAction_writes_AtomFragments FragmentMolecule_checks_bonddegrees GeometryObjects Gui_Fixes Gui_displays_atomic_force_velocity ImplicitCharges IndependentFragmentGrids IndependentFragmentGrids_IndividualZeroInstances IndependentFragmentGrids_IntegrationTest IndependentFragmentGrids_Sole_NN_Calculation JobMarket_RobustOnKillsSegFaults JobMarket_StableWorkerPool JobMarket_unresolvable_hostname_fix MoreRobust_FragmentAutomation ODR_violation_mpqc_open PartialCharges_OrthogonalSummation PdbParser_setsAtomName PythonUI_with_named_parameters QtGui_reactivate_TimeChanged_changes Recreated_GuiChecks Rewrite_FitPartialCharges RotateToPrincipalAxisSystem_UndoRedo SaturateAtoms_findBestMatching SaturateAtoms_singleDegree StoppableMakroAction Subpackage_CodePatterns Subpackage_JobMarket Subpackage_LinearAlgebra Subpackage_levmar Subpackage_mpqc_open Subpackage_vmg Switchable_LogView ThirdParty_MPQC_rebuilt_buildsystem TrajectoryDependenant_MaxOrder TremoloParser_IncreasedPrecision TremoloParser_MultipleTimesteps TremoloParser_setsAtomName Ubuntu_1604_changes stable
Last change on this file since 74459a was 31021ab, checked in by Frederik Heber <heber@…>, 12 years ago

Optimized Bondgraph detection.

  • VectorSet::minDistance() now operators on the set (translating by -point).
  • VectorSet::minDistSquared() removed as is the same as minDistance().
  • LinearAlgebra version is now 3:2:0, API is 1.0.5.
  • decrease log level of DepthFirstSearchAnalysis' msg about disconnected subgraphs.
  • Box::internal_explode() does not clear() internal_list, avoing constructing Vectors all the time.
  • BondGraph::CreateAdjacency gives some more message to tell when it does what.
  • Property mode set to 100644
File size: 6.4 KB
Line 
1# -*- Autoconf -*-
2# Process this file with autoconf to produce a configure script.
3
4AC_PREREQ(2.59)
5AC_INIT(LinearAlgebra, 1.0.4, [heber@ins.uni-bonn.de], [linearalgebra], [http://trac.ins.uni-bonn.de/projects/molecuilder/])
6AC_CONFIG_AUX_DIR([build-aux])
7AC_CONFIG_SRCDIR([src/LinearAlgebra/Vector.cpp])
8AC_CONFIG_HEADER([config.h libLinearAlgebra_config.h])
9AC_CONFIG_MACRO_DIR([m4])
10
11# parallel-tests: use parallel test druver
12# color-tests: us coloring to indicate success/failure when available
13# tar-pax: use newer tar implementation with longer filename (>99 chars)
14AM_INIT_AUTOMAKE([dist-bzip2 1.11 parallel-tests color-tests tar-pax])
15
16# Checks for programs.
17AC_PROG_CXX
18AC_PROG_CC
19AC_PROG_INSTALL
20
21# check for cppunit (taken from svn.apache.org/../xmlbeanscxx)
22AM_PATH_CPPUNIT(1.9.6)
23AM_CONDITIONAL(CONDCPPUNIT, test "$CPPUNIT_LIBS")
24
25DX_HTML_FEATURE(ON)
26DX_PS_FEATURE(OFF)
27DX_PDF_FEATURE(OFF)
28DX_INIT_DOXYGEN(LinearAlgebra, Doxyfile, ${docdir})
29
30LT_INIT([static])
31
32# Define these substitions here to keep all version information in one place.
33# For information on how to properly maintain the library version information,
34# refer to the libtool manual, section "Updating library version information":
35# http://www.gnu.org/software/libtool/manual/html_node/Updating-version-info.html
36AC_SUBST([LINEARALGEBRA_SO_VERSION], [3:2:0])
37AC_SUBST([LINEARALGEBRA_API_VERSION], [1.0.5])
38
39dnl this macro is used to get the arguments supplied
40dnl to the configure script (./configure --enable-debug)
41dnl Check if we have enable debug support.
42AC_MSG_CHECKING(whether to enable debugging)
43have_debug="no"
44AC_ARG_ENABLE(
45 [debug],
46 AS_HELP_STRING([--enable-debug],[turn on debugging [default=no]]),
47 enable_debug=$enableval,
48 enable_debug="no")
49AC_MSG_RESULT($enable_debug)
50AS_IF([test x"$enable_debug" = x"yes"],[
51 AC_DEFINE(MEMDEBUG,1, ["Use memory debugger."])
52 AC_DEFINE(HAVE_DEBUG,1, ["Use debug setting to compile code."])
53 have_debug="yes"
54],[
55 AS_IF([test x"$enable_debug" = x"full"],[
56 AC_DEFINE(MEMDEBUG,1, ["Use memory debugger."])
57 AC_DEFINE(LOG_OBSERVER,1, ["Use observer log."])
58 AC_DEFINE(HAVE_DEBUG,2, ["Use debug setting to compile code."])
59 AC_DEFINE(QT_DEBUG,, ["Enable Qt debug messages."])
60 have_debug="full"
61 ],[
62 AC_DEFINE(NDEBUG,1, ["Don't compile in debugging code."])
63 AC_DEFINE(HAVE_DEBUG,0, ["Use debug setting to compile code."])
64 AC_DEFINE(QT_NO_DEBUG,, ["Disable Qt debug messages."])
65 have_debug="no"
66 ])
67])
68AC_SUBST(HAVE_DEBUG)
69
70dnl this macro is used to get the arguments supplied
71dnl to the configure script (./configure --enable-debug)
72dnl Check if we have enable debug support.
73AC_MSG_CHECKING(whether to enable internal caching/lazy evaluation)
74AC_ARG_ENABLE(
75 [cache],
76 AS_HELP_STRING([--enable-cache],[turn on internal lazy evaluation [default=yes]]),
77 enable_cache=$enableval,
78 enable_cache="yes")
79AC_MSG_RESULT($enable_cache)
80AS_IF([test x"$enable_cache" != x"no"],[
81 AC_DEFINE(HAVE_CACHE,1, ["cache variables to speed up the code."])
82],[
83 AC_DEFINE(NO_CACHING,1, ["Don't use caching code."])
84 AC_DEFINE(HAVE_CACHE,0, ["cache variables to speed up the code."])
85])
86AC_SUBST(HAVE_CACHE)
87
88# Checks for libraries.
89AC_CHECK_LIB(m, sqrt, , AC_MSG_ERROR([compatible libc math library not found]))
90
91# CodePatterns library (serialization header before MemDebug.hpp )
92AM_PATH_CODEPATTERNS([1.1.5], $have_debug,,[AC_MSG_ERROR([Missing CodePatterns library, please specify PKG_CONFIG_PATH or use --with-codepatterns...])])
93
94# boost
95BOOST_REQUIRE([1.40])
96
97# boost headers
98BOOST_BIND
99BOOST_EXCEPTION
100
101# boost libraries
102BOOST_SERIALIZATION
103
104# Checks for header files.
105AC_HEADER_STDC
106AC_CHECK_HEADERS([sys/time.h])
107AC_HEADER_STDBOOL
108
109AC_FUNC_MALLOC
110AC_FUNC_REALLOC
111AC_CHECK_FUNCS([floor pow sqrt strchr])
112
113# Checks for typedefs, structures, and compiler characteristics.
114AC_C_CONST
115AC_C_INLINE
116AC_C_RESTRICT
117AC_TYPE_SIZE_T
118
119# Checks for library functions.
120# check for GNU Scientific Library
121AC_CHECK_HEADERS([gsl/gsl_blas.h])
122AC_SEARCH_LIBS(dnrm2, gslblas gslcblas goto blas cblas)
123AC_SEARCH_LIBS(cblas_dnrm2, gslblas gslcblas blas cblas)
124AC_SEARCH_LIBS(gsl_blas_dnrm2,, gsl)
125#AC_CHECK_LIB(gsl, gsl_blas_dnrm2, , [AC_MSG_ERROR(["No working BLAS found for GSL, stopping."])])
126AC_CHECK_LIB(gsl, main)
127
128# use CppUnit TestRunner or not
129AC_MSG_CHECKING(whether to enable ECut TestRunnerClient)
130AC_ARG_ENABLE(
131 [ecut],
132 AS_HELP_STRING([--enable-ecut],[Use ECut TestRunnerClient [default=no]]),
133 enable_ecut=$disableval,
134 enable_ecut="no")
135AC_MSG_RESULT($enable_ecut)
136AS_IF([test x"$enable_ecut" = x"yes"],[
137 AC_DEFINE(HAVE_ECUT,1, ["Use ECut TestRunnerClient instead of our own."])
138 AC_SUBST(HAVE_ECUT)
139])
140AM_CONDITIONAL([CONDECUT], [test x"$enable_ecut" = x"yes"])
141
142# with valgrinding testsuite or not
143AC_MSG_CHECKING(whether to enable valgrind memory checking in testsuite)
144AC_ARG_ENABLE(
145 [valgrind],
146 AS_HELP_STRING([--enable-valgrind],[Use Valgrind on the testsuite [default=no]]),
147 enable_valgrind=$enableval,
148 enable_valgrind="no")
149AC_MSG_RESULT($enable_valgrind)
150AS_IF([test x"$enable_valgrind" = x"yes"], [
151 AC_CHECK_HEADER([valgrind/valgrind.h],
152 [
153 # check header
154 AC_DEFINE(HAVE_VALGRIND_TESTSUITE,1, ["Use Valgrind to check the testsuite."])
155 # check path
156 AC_PATH_PROG(VALGRIND, [valgrind], [/bin/false])
157 # set variables
158 AC_SUBST(HAVE_VALGRIND_TESTSUITE)
159 AC_SUBST(VALGRIND)
160 ],
161 [
162 AC_MSG_ERROR(["Valgrind support requested but headers not available."])
163 ]
164 )
165])
166
167# Check for "extern inline", using a modified version
168# of the test for AC_C_INLINE from acspecific.mt
169AC_CACHE_CHECK([for extern inline], ac_cv_c_extern_inline,
170[ac_cv_c_extern_inline=no
171AC_TRY_COMPILE([extern $ac_cv_c_inline double foo(double x);
172extern $ac_cv_c_inline double foo(double x) { return x+1.0; };
173double foo (double x) { return x + 1.0; };],
174[ foo(1.0) ],
175[ac_cv_c_extern_inline="yes"])
176])
177
178if test "$ac_cv_c_inline" != no ; then
179 AC_DEFINE(HAVE_INLINE,1, ["May use inline routines"])
180 AC_SUBST(HAVE_INLINE)
181fi
182
183#AC_MSG_NOTICE(["CFLAGS: $CFLAGS, CXXFLAGS: $CXXFLAGS, LDFLAGS: $LDFLAGS, CC: $CC, CXX:, $CXX, MPICC: $MPICC, MPILIBS: $MPILIBS, LIBS: $LIBS"])
184
185# test suite
186AC_CONFIG_TESTDIR(tests/CodeChecks)
187AC_CONFIG_FILES([
188 tests/CodeChecks/atlocal
189 tests/CodeChecks/Makefile])
190
191AC_CONFIG_FILES([
192 LinearAlgebra.pc:LinearAlgebra.pc.in
193 LinearAlgebra-debug.pc:LinearAlgebra-debug.pc.in])
194
195AC_CONFIG_FILES([
196 Makefile
197 doc/Makefile
198 src/LinearAlgebra/Makefile
199])
200
201AC_CONFIG_FILES([
202 src/unittests/Makefile
203])
204AC_OUTPUT
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